RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 VSIG10Q8N0Z9 540 aa17.27■□□□□ 0.36
HLA-DOB-207ENST00000447394 AK7Q96M32 723 aa17.27■□□□□ 0.36
HLA-DOB-207ENST00000447394 BABAM1Q9NWV8 329 aa17.27■□□□□ 0.36
HLA-DOB-207ENST00000447394 CNTNAP4Q9C0A0 1308 aa17.26■□□□□ 0.35
HLA-DOB-207ENST00000447394 GNPATO15228 680 aa17.26■□□□□ 0.35
HLA-DOB-207ENST00000447394 GIGYF1O75420 1035 aaPredicted RBP17.26■□□□□ 0.35
HLA-DOB-207ENST00000447394 PHF14O94880 888 aa17.26■□□□□ 0.35
HLA-DOB-207ENST00000447394 SNRPA1P09661 255 aaKnown RBP17.26■□□□□ 0.35
HLA-DOB-207ENST00000447394 NBPF14Q5TI25 921 aa17.26■□□□□ 0.35
HLA-DOB-207ENST00000447394 INTS5Q6P9B9 1019 aaKnown RBP17.26■□□□□ 0.35
HLA-DOB-207ENST00000447394 NGEFQ8N5V2 710 aa17.26■□□□□ 0.35
HLA-DOB-207ENST00000447394 ZBTB1Q9Y2K1 713 aa17.26■□□□□ 0.35
HLA-DOB-207ENST00000447394 PNPLA7Q6ZV29 1317 aa17.25■□□□□ 0.35
HLA-DOB-207ENST00000447394 ELL2O00472 640 aaPredicted RBP17.25■□□□□ 0.35
HLA-DOB-207ENST00000447394 A1BGP04217 495 aa17.25■□□□□ 0.35
HLA-DOB-207ENST00000447394 C8orf58Q8NAV2 365 aa17.25■□□□□ 0.35
HLA-DOB-207ENST00000447394 NECTIN2Q92692 538 aa17.25■□□□□ 0.35
HLA-DOB-207ENST00000447394 TFCP2L1Q9NZI6 479 aa17.25■□□□□ 0.35
HLA-DOB-207ENST00000447394 TSPYL6Q8N831 410 aa17.24■□□□□ 0.35
HLA-DOB-207ENST00000447394 CCDC87Q9NVE4 849 aa17.24■□□□□ 0.35
HLA-DOB-207ENST00000447394 BCORQ6W2J9 1755 aa17.24■□□□□ 0.35
HLA-DOB-207ENST00000447394 SCN7AQ01118 1682 aa17.23■□□□□ 0.35
HLA-DOB-207ENST00000447394 CANXP27824 592 aaKnown RBP17.23■□□□□ 0.35
HLA-DOB-207ENST00000447394 GOLGA2Q08379 1002 aa17.23■□□□□ 0.35
HLA-DOB-207ENST00000447394 DUSP27Q5VZP5 1158 aa17.23■□□□□ 0.35
HLA-DOB-207ENST00000447394 YTHDC1Q96MU7 727 aaKnown RBP17.23■□□□□ 0.35
HLA-DOB-207ENST00000447394 EIF2S2P20042 333 aaKnown RBP17.22■□□□□ 0.35
HLA-DOB-207ENST00000447394 NBPF26B4DH59 902 aa17.21■□□□□ 0.35
HLA-DOB-207ENST00000447394 STARD3NLO95772 234 aa17.21■□□□□ 0.35
HLA-DOB-207ENST00000447394 EXOSC9Q06265 439 aaKnown RBP17.21■□□□□ 0.35
HLA-DOB-207ENST00000447394 RC3H1Q5TC82 1133 aaKnown RBP17.21■□□□□ 0.35
HLA-DOB-207ENST00000447394 NBPF10Q6P3W6 841 aaKnown RBP17.21■□□□□ 0.35
HLA-DOB-207ENST00000447394 COL23A1Q86Y22 540 aaPredicted RBP17.21■□□□□ 0.35
HLA-DOB-207ENST00000447394 NBPF15Q8N660 670 aa17.21■□□□□ 0.35
HLA-DOB-207ENST00000447394 ZNF330Q9Y3S2 320 aaPredicted RBP17.21■□□□□ 0.35
HLA-DOB-207ENST00000447394 SOS1Q07889 1333 aaPredicted RBP17.21■□□□□ 0.34
HLA-DOB-207ENST00000447394 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.2■□□□□ 0.34
HLA-DOB-207ENST00000447394 RPS6KA4O75676 772 aa17.2■□□□□ 0.34
HLA-DOB-207ENST00000447394 ANXA1P04083 346 aa17.2■□□□□ 0.34
HLA-DOB-207ENST00000447394 SLFN5Q08AF3 891 aa17.2■□□□□ 0.34
HLA-DOB-207ENST00000447394 MYH16Q9H6N6 1097 aa17.2■□□□□ 0.34
HLA-DOB-207ENST00000447394 ZBED9Q6R2W3 1325 aa17.2■□□□□ 0.34
HLA-DOB-207ENST00000447394 COL24A1Q17RW2 1714 aa17.19■□□□□ 0.34
HLA-DOB-207ENST00000447394 COL15A1P39059 1388 aa17.19■□□□□ 0.34
HLA-DOB-207ENST00000447394 MSH5O43196 834 aa17.19■□□□□ 0.34
HLA-DOB-207ENST00000447394 PROSER3Q2NL68 480 aa17.19■□□□□ 0.34
HLA-DOB-207ENST00000447394 TEX13AQ9BXU3 409 aaPredicted RBP17.19■□□□□ 0.34
HLA-DOB-207ENST00000447394 RTCBQ9Y3I0 505 aaKnown RBP17.19■□□□□ 0.34
HLA-DOB-207ENST00000447394 E9PSI1 815 aa17.18■□□□□ 0.34
HLA-DOB-207ENST00000447394 TCERG1O14776 1098 aaKnown RBP17.18■□□□□ 0.34
HLA-DOB-207ENST00000447394 MYL6BP14649 208 aa17.18■□□□□ 0.34
HLA-DOB-207ENST00000447394 SRP68Q9UHB9 627 aaKnown RBP17.18■□□□□ 0.34
HLA-DOB-207ENST00000447394 SSFA2P28290 1259 aa17.17■□□□□ 0.34
HLA-DOB-207ENST00000447394 PDIA6Q15084 440 aa17.17■□□□□ 0.34
HLA-DOB-207ENST00000447394 TWISTNBQ3B726 338 aaPredicted RBP17.17■□□□□ 0.34
HLA-DOB-207ENST00000447394 HDGFL1Q5TGJ6 251 aa17.17■□□□□ 0.34
HLA-DOB-207ENST00000447394 ARHGEF1Q92888 912 aaKnown RBP17.17■□□□□ 0.34
HLA-DOB-207ENST00000447394 CHPF2Q9P2E5 772 aa17.17■□□□□ 0.34
HLA-DOB-207ENST00000447394 NUP98P52948 1817 aa17.17■□□□□ 0.34
HLA-DOB-207ENST00000447394 ARFGEF2Q9Y6D5 1785 aa17.16■□□□□ 0.34
HLA-DOB-207ENST00000447394 ZBTB7AO95365 584 aa17.16■□□□□ 0.34
HLA-DOB-207ENST00000447394 MSL1Q68DK7 614 aa17.16■□□□□ 0.34
HLA-DOB-207ENST00000447394 TRMT2AQ8IZ69 625 aaKnown RBP17.16■□□□□ 0.34
HLA-DOB-207ENST00000447394 EIF5P55010 431 aaKnown RBP17.15■□□□□ 0.34
HLA-DOB-207ENST00000447394 HOXB7P09629 217 aa17.14■□□□□ 0.33
HLA-DOB-207ENST00000447394 IL6STP40189 918 aaPredicted RBP17.14■□□□□ 0.33
HLA-DOB-207ENST00000447394 TRAPPC3LQ5T215 181 aa17.14■□□□□ 0.33
HLA-DOB-207ENST00000447394 LRP10Q7Z4F1 713 aa17.14■□□□□ 0.33
HLA-DOB-207ENST00000447394 ANKRD36CQ5JPF3 1778 aa17.14■□□□□ 0.33
HLA-DOB-207ENST00000447394 CACNA1FO60840 1977 aa17.13■□□□□ 0.33
HLA-DOB-207ENST00000447394 ARXQ96QS3 562 aa17.13■□□□□ 0.33
HLA-DOB-207ENST00000447394 TBC1D2BQ9UPU7 963 aa17.13■□□□□ 0.33
HLA-DOB-207ENST00000447394 USP42Q9H9J4 1324 aaKnown RBP17.13■□□□□ 0.33
HLA-DOB-207ENST00000447394 VAMP4O75379 141 aa17.12■□□□□ 0.33
HLA-DOB-207ENST00000447394 RFC4P35249 363 aa17.12■□□□□ 0.33
HLA-DOB-207ENST00000447394 TTLL7Q6ZT98 887 aa17.12■□□□□ 0.33
HLA-DOB-207ENST00000447394 ATF5Q9Y2D1 282 aaPredicted RBP17.12■□□□□ 0.33
HLA-DOB-207ENST00000447394 AFDNP55196 1824 aaKnown RBP17.12■□□□□ 0.33
HLA-DOB-207ENST00000447394 ADRA2BP18089 450 aa17.11■□□□□ 0.33
HLA-DOB-207ENST00000447394 USPL1Q5W0Q7 1092 aa17.11■□□□□ 0.33
HLA-DOB-207ENST00000447394 DZIP3Q86Y13 1208 aaKnown RBP17.11■□□□□ 0.33
HLA-DOB-207ENST00000447394 FLAD1Q8NFF5 587 aa17.11■□□□□ 0.33
HLA-DOB-207ENST00000447394 BCL2L12Q9HB09 334 aa17.11■□□□□ 0.33
HLA-DOB-207ENST00000447394 ERBB4Q15303 1308 aa17.11■□□□□ 0.33
HLA-DOB-207ENST00000447394 LRP5O75197 1615 aa17.1■□□□□ 0.33
HLA-DOB-207ENST00000447394 GYS1P13807 737 aa17.1■□□□□ 0.33
HLA-DOB-207ENST00000447394 HMGB2P26583 209 aaKnown RBP17.1■□□□□ 0.33
HLA-DOB-207ENST00000447394 AIMP1Q12904 312 aaKnown RBP17.1■□□□□ 0.33
HLA-DOB-207ENST00000447394 XAGE3Q8WTP9 111 aa17.1■□□□□ 0.33
HLA-DOB-207ENST00000447394 PHAXQ9H814 394 aaKnown RBP17.1■□□□□ 0.33
HLA-DOB-207ENST00000447394 DDX21Q9NR30 783 aaKnown RBP eCLIP17.1■□□□□ 0.33
HLA-DOB-207ENST00000447394 CAMTA2O94983 1202 aa17.09■□□□□ 0.33
HLA-DOB-207ENST00000447394 FKBP8Q14318 412 aa17.09■□□□□ 0.33
HLA-DOB-207ENST00000447394 CCDC30Q5VVM6 783 aa17.09■□□□□ 0.33
HLA-DOB-207ENST00000447394 ZBTB3Q9H5J0 574 aa17.09■□□□□ 0.33
HLA-DOB-207ENST00000447394 DBF4Q9UBU7 674 aaPredicted RBP17.09■□□□□ 0.33
HLA-DOB-207ENST00000447394 NARFQ9UHQ1 456 aa17.09■□□□□ 0.33
HLA-DOB-207ENST00000447394 G2E3Q7L622 706 aa17.08■□□□□ 0.32
HLA-DOB-207ENST00000447394 BCL2L13Q9BXK5 485 aa17.08■□□□□ 0.32
HLA-DOB-207ENST00000447394 MTFR1LQ9H019 292 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms