RNA–Protein interactions for RNA: ENST00000446851.6

LIN54-203, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-203ENST00000446851 XAGE3Q8WTP9 111 aa13.12□□□□□ -0.31
LIN54-203ENST00000446851 CHL1O00533 1208 aa13.12□□□□□ -0.31
LIN54-203ENST00000446851 GIGYF1O75420 1035 aaPredicted RBP13.12□□□□□ -0.31
LIN54-203ENST00000446851 RGPD2P0DJD1 1756 aa13.12□□□□□ -0.31
LIN54-203ENST00000446851 KDM6AO15550 1401 aaPredicted RBP13.12□□□□□ -0.31
LIN54-203ENST00000446851 F6X3S4 739 aa13.12□□□□□ -0.31
LIN54-203ENST00000446851 NEFLP07196 543 aa13.12□□□□□ -0.31
LIN54-203ENST00000446851 ANO8Q9HCE9 1232 aaPredicted RBP13.12□□□□□ -0.31
LIN54-203ENST00000446851 PHAXQ9H814 394 aaKnown RBP13.11□□□□□ -0.31
LIN54-203ENST00000446851 COL3A1P02461 1466 aaPredicted RBP13.11□□□□□ -0.31
LIN54-203ENST00000446851 PROSER3Q2NL68 480 aa13.11□□□□□ -0.31
LIN54-203ENST00000446851 USPL1Q5W0Q7 1092 aa13.11□□□□□ -0.31
LIN54-203ENST00000446851 PROM2Q8N271 834 aa13.11□□□□□ -0.31
LIN54-203ENST00000446851 DDX58O95786 925 aaKnown RBP13.1□□□□□ -0.31
LIN54-203ENST00000446851 NEXNQ0ZGT2 675 aa13.1□□□□□ -0.31
LIN54-203ENST00000446851 SLC15A2Q16348 729 aa13.1□□□□□ -0.31
LIN54-203ENST00000446851 BCAR3O75815 825 aa13.1□□□□□ -0.31
LIN54-203ENST00000446851 SLC4A9Q96Q91 983 aa13.1□□□□□ -0.31
LIN54-203ENST00000446851 DBF4Q9UBU7 674 aaPredicted RBP13.1□□□□□ -0.31
LIN54-203ENST00000446851 POLD1P28340 1107 aa13.09□□□□□ -0.31
LIN54-203ENST00000446851 SLFN5Q08AF3 891 aa13.09□□□□□ -0.31
LIN54-203ENST00000446851 DISP2A7MBM2 1401 aa13.09□□□□□ -0.31
LIN54-203ENST00000446851 PLSCR1O15162 318 aa13.09□□□□□ -0.31
LIN54-203ENST00000446851 ZNF827Q17R98 1081 aa13.09□□□□□ -0.31
LIN54-203ENST00000446851 SLC27A3Q5K4L6 730 aa13.09□□□□□ -0.31
LIN54-203ENST00000446851 TTLL7Q6ZT98 887 aa13.09□□□□□ -0.31
LIN54-203ENST00000446851 NIP7Q9Y221 180 aaKnown RBP eCLIP13.09□□□□□ -0.31
LIN54-203ENST00000446851 SUPT16HQ9Y5B9 1047 aaKnown RBP13.09□□□□□ -0.31
LIN54-203ENST00000446851 ZBED9Q6R2W3 1325 aa13.09□□□□□ -0.31
LIN54-203ENST00000446851 CAMKK2Q96RR4 588 aa13.08□□□□□ -0.31
LIN54-203ENST00000446851 CHMP4AQ9BY43 222 aa13.08□□□□□ -0.32
LIN54-203ENST00000446851 RCAN3Q9UKA8 241 aa13.08□□□□□ -0.32
LIN54-203ENST00000446851 ARHGEF1Q92888 912 aaKnown RBP13.08□□□□□ -0.32
LIN54-203ENST00000446851 MYD88Q99836 296 aa13.08□□□□□ -0.32
LIN54-203ENST00000446851 BCL9O00512 1426 aa13.07□□□□□ -0.32
LIN54-203ENST00000446851 ABCA3Q99758 1704 aa13.07□□□□□ -0.32
LIN54-203ENST00000446851 PI4KAP2A4QPH2 592 aa13.07□□□□□ -0.32
LIN54-203ENST00000446851 PI4KAP1Q8N8J0 262 aa13.07□□□□□ -0.32
LIN54-203ENST00000446851 C9orf78Q9NZ63 289 aaPredicted RBP13.07□□□□□ -0.32
LIN54-203ENST00000446851 HEG1Q9ULI3 1381 aa13.07□□□□□ -0.32
LIN54-203ENST00000446851 ITPRIPQ8IWB1 547 aa13.07□□□□□ -0.32
LIN54-203ENST00000446851 SSH1Q8WYL5 1049 aa13.07□□□□□ -0.32
LIN54-203ENST00000446851 SETDB2Q96T68 719 aa13.07□□□□□ -0.32
LIN54-203ENST00000446851 CYP19A1P11511 503 aaPredicted RBP13.07□□□□□ -0.32
LIN54-203ENST00000446851 NBPF5PQ86XG9 351 aaPredicted RBP13.07□□□□□ -0.32
LIN54-203ENST00000446851 LMO7Q8WWI1 1683 aa13.07□□□□□ -0.32
LIN54-203ENST00000446851 ANKRD13DQ6ZTN6 518 aa13.06□□□□□ -0.32
LIN54-203ENST00000446851 G2E3Q7L622 706 aa13.06□□□□□ -0.32
LIN54-203ENST00000446851 ZNF652Q9Y2D9 606 aa13.06□□□□□ -0.32
LIN54-203ENST00000446851 COL23A1Q86Y22 540 aaPredicted RBP13.05□□□□□ -0.32
LIN54-203ENST00000446851 PARP3Q9Y6F1 533 aa13.05□□□□□ -0.32
LIN54-203ENST00000446851 MMP10P09238 476 aa13.05□□□□□ -0.32
LIN54-203ENST00000446851 CCDC27Q2M243 656 aa13.05□□□□□ -0.32
LIN54-203ENST00000446851 TRMT112Q9UI30 125 aaKnown RBP13.05□□□□□ -0.32
LIN54-203ENST00000446851 NOB1Q9ULX3 412 aaKnown RBP13.05□□□□□ -0.32
LIN54-203ENST00000446851 ANKRD26Q9UPS8 1709 aa13.05□□□□□ -0.32
LIN54-203ENST00000446851 APBB1O00213 710 aa13.05□□□□□ -0.32
LIN54-203ENST00000446851 NUTM1Q86Y26 1132 aa13.05□□□□□ -0.32
LIN54-203ENST00000446851 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.05□□□□□ -0.32
LIN54-203ENST00000446851 MAP3K2Q9Y2U5 619 aa13.05□□□□□ -0.32
LIN54-203ENST00000446851 COL18A1P39060 1754 aa13.04□□□□□ -0.32
LIN54-203ENST00000446851 FLIIQ13045 1269 aa13.04□□□□□ -0.32
LIN54-203ENST00000446851 ZNF622Q969S3 477 aaKnown RBP eCLIP13.04□□□□□ -0.32
LIN54-203ENST00000446851 NWD2Q9ULI1 1742 aa13.04□□□□□ -0.32
LIN54-203ENST00000446851 VAMP4O75379 141 aa13.04□□□□□ -0.32
LIN54-203ENST00000446851 RPS6KA4O75676 772 aa13.04□□□□□ -0.32
LIN54-203ENST00000446851 HYPKQ9NX55 129 aa13.04□□□□□ -0.32
LIN54-203ENST00000446851 IPO8O15397 1037 aaKnown RBP13.03□□□□□ -0.32
LIN54-203ENST00000446851 DDX21Q9NR30 783 aaKnown RBP eCLIP13.03□□□□□ -0.32
LIN54-203ENST00000446851 NBPF26B4DH59 902 aa13.03□□□□□ -0.32
LIN54-203ENST00000446851 FKBP8Q14318 412 aa13.03□□□□□ -0.32
LIN54-203ENST00000446851 NBPF10Q6P3W6 841 aaKnown RBP13.03□□□□□ -0.32
LIN54-203ENST00000446851 NBPF15Q8N660 670 aa13.03□□□□□ -0.32
LIN54-203ENST00000446851 SPON1Q9HCB6 807 aa13.03□□□□□ -0.32
LIN54-203ENST00000446851 MARF1Q9Y4F3 1742 aaKnown RBP13.02□□□□□ -0.32
LIN54-203ENST00000446851 A0A087WZG4 1122 aa13.02□□□□□ -0.32
LIN54-203ENST00000446851 HMGB2P26583 209 aaKnown RBP13.02□□□□□ -0.32
LIN54-203ENST00000446851 CWF19L2Q2TBE0 894 aaKnown RBP13.02□□□□□ -0.32
LIN54-203ENST00000446851 TAF7LQ5H9L4 462 aa13.02□□□□□ -0.32
LIN54-203ENST00000446851 CEMIPQ8WUJ3 1361 aa13.02□□□□□ -0.32
LIN54-203ENST00000446851 AMIGO3Q86WK7 504 aa13.02□□□□□ -0.33
LIN54-203ENST00000446851 HLFQ16534 295 aa13.01□□□□□ -0.33
LIN54-203ENST00000446851 PANK1Q8TE04 598 aa13.01□□□□□ -0.33
LIN54-203ENST00000446851 DCAF8L1A6NGE4 600 aa13.01□□□□□ -0.33
LIN54-203ENST00000446851 FLAD1Q8NFF5 587 aa13.01□□□□□ -0.33
LIN54-203ENST00000446851 FAM89AQ96GI7 184 aa13.01□□□□□ -0.33
LIN54-203ENST00000446851 COG6Q9Y2V7 657 aa13.01□□□□□ -0.33
LIN54-203ENST00000446851 NCAPD2Q15021 1401 aa13.01□□□□□ -0.33
LIN54-203ENST00000446851 GOLGB1Q14789 3259 aaKnown RBP13□□□□□ -0.33
LIN54-203ENST00000446851 IL16Q14005 1332 aa13□□□□□ -0.33
LIN54-203ENST00000446851 INTS5Q6P9B9 1019 aaKnown RBP13□□□□□ -0.33
LIN54-203ENST00000446851 VSIG10Q8N0Z9 540 aa13□□□□□ -0.33
LIN54-203ENST00000446851 HCLS1P14317 486 aaPredicted RBP13□□□□□ -0.33
LIN54-203ENST00000446851 IL6STP40189 918 aaPredicted RBP13□□□□□ -0.33
LIN54-203ENST00000446851 TMX4Q9H1E5 349 aaPredicted RBP13□□□□□ -0.33
LIN54-203ENST00000446851 NLGN1Q8N2Q7 840 aa13□□□□□ -0.33
LIN54-203ENST00000446851 ZKSCAN2Q63HK3 967 aa12.99□□□□□ -0.33
LIN54-203ENST00000446851 UBE3BQ7Z3V4 1068 aa12.99□□□□□ -0.33
LIN54-203ENST00000446851 CNBD1Q8NA66 436 aa12.99□□□□□ -0.33
LIN54-203ENST00000446851 ZNF853P0CG23 659 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms