RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 PPP1R12BO60237 982 aaPredicted RBP8.15□□□□□ -1.1
HMGB1P48-201ENST00000446155 POU4F2Q12837 409 aa8.15□□□□□ -1.1
HMGB1P48-201ENST00000446155 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.15□□□□□ -1.1
HMGB1P48-201ENST00000446155 TMEM214Q6NUQ4 689 aaKnown RBP8.15□□□□□ -1.1
HMGB1P48-201ENST00000446155 PRICKLE2Q7Z3G6 844 aa8.15□□□□□ -1.1
HMGB1P48-201ENST00000446155 NIFKQ9BYG3 293 aaKnown RBP8.15□□□□□ -1.1
HMGB1P48-201ENST00000446155 SENP3-EIF4A1A0A087X0R7 540 aa8.14□□□□□ -1.11
HMGB1P48-201ENST00000446155 POTECB2RU33 542 aa8.14□□□□□ -1.11
HMGB1P48-201ENST00000446155 SNRPBP14678 240 aaKnown RBP8.14□□□□□ -1.11
HMGB1P48-201ENST00000446155 GNASQ5JWF2 1037 aa8.14□□□□□ -1.11
HMGB1P48-201ENST00000446155 SH3PXD2AQ5TCZ1 1133 aa8.14□□□□□ -1.11
HMGB1P48-201ENST00000446155 MAN1A2O60476 641 aa8.13□□□□□ -1.11
HMGB1P48-201ENST00000446155 BRD1O95696 1058 aa8.13□□□□□ -1.11
HMGB1P48-201ENST00000446155 PDIA4P13667 645 aaKnown RBP8.13□□□□□ -1.11
HMGB1P48-201ENST00000446155 RHOQP17081 205 aa8.13□□□□□ -1.11
HMGB1P48-201ENST00000446155 NOS2P35228 1153 aa8.13□□□□□ -1.11
HMGB1P48-201ENST00000446155 COL26A1Q96A83 441 aa8.13□□□□□ -1.11
HMGB1P48-201ENST00000446155 CABP1Q9NZU7 370 aa8.13□□□□□ -1.11
HMGB1P48-201ENST00000446155 SERTM1A2A2V5 107 aa8.12□□□□□ -1.11
HMGB1P48-201ENST00000446155 PLA2G4AP47712 749 aa8.12□□□□□ -1.11
HMGB1P48-201ENST00000446155 B4GALNT3Q6L9W6 998 aa8.12□□□□□ -1.11
HMGB1P48-201ENST00000446155 C7orf43Q8WVR3 580 aa8.12□□□□□ -1.11
HMGB1P48-201ENST00000446155 L3MBTL2Q969R5 705 aa8.12□□□□□ -1.11
HMGB1P48-201ENST00000446155 GTF2E1P29083 439 aaPredicted RBP8.11□□□□□ -1.11
HMGB1P48-201ENST00000446155 SCNN1AP37088 669 aa8.11□□□□□ -1.11
HMGB1P48-201ENST00000446155 CAPN12Q6ZSI9 719 aa8.11□□□□□ -1.11
HMGB1P48-201ENST00000446155 ZDHHC3Q9NYG2 299 aa8.11□□□□□ -1.11
HMGB1P48-201ENST00000446155 PARP3Q9Y6F1 533 aa8.11□□□□□ -1.11
HMGB1P48-201ENST00000446155 SLC35F4A4IF30 521 aa8.1□□□□□ -1.11
HMGB1P48-201ENST00000446155 ATP4AP20648 1035 aa8.1□□□□□ -1.11
HMGB1P48-201ENST00000446155 TXLNAP40222 546 aa8.1□□□□□ -1.11
HMGB1P48-201ENST00000446155 PHKA2P46019 1235 aa8.1□□□□□ -1.11
HMGB1P48-201ENST00000446155 TXNDC2Q86VQ3 553 aa8.1□□□□□ -1.11
HMGB1P48-201ENST00000446155 DYRK1BQ9Y463 629 aa8.1□□□□□ -1.11
HMGB1P48-201ENST00000446155 C11orf95C9JLR9 678 aaPredicted RBP8.09□□□□□ -1.11
HMGB1P48-201ENST00000446155 PTSQ03393 145 aa8.09□□□□□ -1.11
HMGB1P48-201ENST00000446155 C1orf53Q5VUE5 145 aa8.09□□□□□ -1.11
HMGB1P48-201ENST00000446155 CHMP7Q8WUX9 453 aaPredicted RBP8.09□□□□□ -1.11
HMGB1P48-201ENST00000446155 MYO19Q96H55 970 aa8.09□□□□□ -1.11
HMGB1P48-201ENST00000446155 TIMMDC1Q9NPL8 285 aa8.09□□□□□ -1.11
HMGB1P48-201ENST00000446155 GNEQ9Y223 722 aaKnown RBP8.09□□□□□ -1.11
HMGB1P48-201ENST00000446155 A0A1B0GTH6 734 aa8.08□□□□□ -1.12
HMGB1P48-201ENST00000446155 QTRT2Q9H974 415 aaKnown RBP8.08□□□□□ -1.12
HMGB1P48-201ENST00000446155 SEPT3Q9UH03 358 aa8.08□□□□□ -1.12
HMGB1P48-201ENST00000446155 ZNF232Q9UNY5 417 aa8.08□□□□□ -1.12
HMGB1P48-201ENST00000446155 PTCD1O75127 700 aaKnown RBP8.07□□□□□ -1.12
HMGB1P48-201ENST00000446155 MSX1P28360 303 aa8.07□□□□□ -1.12
HMGB1P48-201ENST00000446155 MKNK1Q9BUB5 465 aa8.07□□□□□ -1.12
HMGB1P48-201ENST00000446155 PHACTR1Q9C0D0 580 aa8.07□□□□□ -1.12
HMGB1P48-201ENST00000446155 CHMP3Q9Y3E7 222 aa8.07□□□□□ -1.12
HMGB1P48-201ENST00000446155 KCNA1Q09470 495 aa8.06□□□□□ -1.12
HMGB1P48-201ENST00000446155 NBPF1Q3BBV0 1214 aa8.06□□□□□ -1.12
HMGB1P48-201ENST00000446155 ALDH16A1Q8IZ83 802 aa8.06□□□□□ -1.12
HMGB1P48-201ENST00000446155 KLRG1Q96E93 195 aa8.06□□□□□ -1.12
HMGB1P48-201ENST00000446155 CRISPLD1Q9H336 500 aa8.06□□□□□ -1.12
HMGB1P48-201ENST00000446155 HCN4Q9Y3Q4 1203 aa8.06□□□□□ -1.12
HMGB1P48-201ENST00000446155 GPC6Q9Y625 555 aaPredicted RBP8.06□□□□□ -1.12
HMGB1P48-201ENST00000446155 THBS1P07996 1170 aa8.05□□□□□ -1.12
HMGB1P48-201ENST00000446155 ARID4AP29374 1257 aaPredicted RBP8.05□□□□□ -1.12
HMGB1P48-201ENST00000446155 RTN1Q16799 776 aa8.05□□□□□ -1.12
HMGB1P48-201ENST00000446155 KCTD17Q8N5Z5 321 aa8.05□□□□□ -1.12
HMGB1P48-201ENST00000446155 CCDC155Q8N6L0 562 aa8.05□□□□□ -1.12
HMGB1P48-201ENST00000446155 SAP130Q9H0E3 1048 aa8.05□□□□□ -1.12
HMGB1P48-201ENST00000446155 F11P03951 625 aa8.04□□□□□ -1.12
HMGB1P48-201ENST00000446155 COX20Q5RI15 118 aa8.04□□□□□ -1.12
HMGB1P48-201ENST00000446155 AIDAQ96BJ3 306 aa8.04□□□□□ -1.12
HMGB1P48-201ENST00000446155 ZIC5Q96T25 663 aa8.04□□□□□ -1.12
HMGB1P48-201ENST00000446155 CUEDC1Q9NWM3 386 aaPredicted RBP8.04□□□□□ -1.12
HMGB1P48-201ENST00000446155 LRFN2Q9ULH4 789 aa8.04□□□□□ -1.12
HMGB1P48-201ENST00000446155 TNFRSF10BO14763 440 aa8.03□□□□□ -1.12
HMGB1P48-201ENST00000446155 TATP17735 454 aaPredicted RBP8.03□□□□□ -1.12
HMGB1P48-201ENST00000446155 C16orf46Q6P387 395 aa8.03□□□□□ -1.12
HMGB1P48-201ENST00000446155 VTI1AQ96AJ9 217 aa8.03□□□□□ -1.12
HMGB1P48-201ENST00000446155 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.03□□□□□ -1.12
HMGB1P48-201ENST00000446155 SERPINB4P48594 390 aa8.02□□□□□ -1.13
HMGB1P48-201ENST00000446155 UBAP2LQ14157 1087 aaKnown RBP8.02□□□□□ -1.13
HMGB1P48-201ENST00000446155 NAA30Q147X3 362 aaPredicted RBP8.02□□□□□ -1.13
HMGB1P48-201ENST00000446155 GTF3C2Q8WUA4 911 aaPredicted RBP8.02□□□□□ -1.13
HMGB1P48-201ENST00000446155 NGLY1Q96IV0 654 aa8.02□□□□□ -1.13
HMGB1P48-201ENST00000446155 GPAMQ9HCL2 828 aa8.02□□□□□ -1.13
HMGB1P48-201ENST00000446155 DNMT3AQ9Y6K1 912 aaPredicted RBP8.02□□□□□ -1.13
HMGB1P48-201ENST00000446155 PPFIA3O75145 1194 aa8.01□□□□□ -1.13
HMGB1P48-201ENST00000446155 ITGA6P23229 1130 aa8.01□□□□□ -1.13
HMGB1P48-201ENST00000446155 RHPN1Q8TCX5 695 aa8.01□□□□□ -1.13
HMGB1P48-201ENST00000446155 HELQQ8TDG4 1101 aa8.01□□□□□ -1.13
HMGB1P48-201ENST00000446155 GAS2L1Q99501 681 aaPredicted RBP8.01□□□□□ -1.13
HMGB1P48-201ENST00000446155 RUBCNLQ9H714 662 aa8.01□□□□□ -1.13
HMGB1P48-201ENST00000446155 PODXL2Q9NZ53 605 aa8.01□□□□□ -1.13
HMGB1P48-201ENST00000446155 EGFL7Q9UHF1 273 aa8.01□□□□□ -1.13
HMGB1P48-201ENST00000446155 BCS1LQ9Y276 419 aa8.01□□□□□ -1.13
HMGB1P48-201ENST00000446155 A0A1W2PNR3 127 aa8□□□□□ -1.13
HMGB1P48-201ENST00000446155 PATL2C9JE40 543 aaKnown RBP8□□□□□ -1.13
HMGB1P48-201ENST00000446155 NPR3P17342 541 aa8□□□□□ -1.13
HMGB1P48-201ENST00000446155 LBRQ14739 615 aaKnown RBP8□□□□□ -1.13
HMGB1P48-201ENST00000446155 FAM26DQ5JW98 314 aa8□□□□□ -1.13
HMGB1P48-201ENST00000446155 ZNF787Q6DD87 383 aa8□□□□□ -1.13
HMGB1P48-201ENST00000446155 TRIM22Q8IYM9 498 aa8□□□□□ -1.13
HMGB1P48-201ENST00000446155 CCER1Q8TC90 406 aaPredicted RBP8□□□□□ -1.13
HMGB1P48-201ENST00000446155 DMGDHQ9UI17 866 aaKnown RBP8□□□□□ -1.13
HMGB1P48-201ENST00000446155 MTMR7Q9Y216 660 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms