RNA–Protein interactions for RNA: ENST00000445998.1

UBQLN3-202, Transcript of ubiquilin 3, humanhuman

TSL 3

Gene UBQLN3, Length 817 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3-202ENST00000445998 RPS6KA4O75676 772 aa17.84■□□□□ 0.45
UBQLN3-202ENST00000445998 HOXB7P09629 217 aa17.84■□□□□ 0.45
UBQLN3-202ENST00000445998 SSFA2P28290 1259 aa17.84■□□□□ 0.45
UBQLN3-202ENST00000445998 NPM2Q86SE8 214 aaKnown RBP17.84■□□□□ 0.45
UBQLN3-202ENST00000445998 ANO8Q9HCE9 1232 aaPredicted RBP17.84■□□□□ 0.45
UBQLN3-202ENST00000445998 UBR3Q6ZT12 1888 aa17.84■□□□□ 0.45
UBQLN3-202ENST00000445998 E9PSI1 815 aa17.83■□□□□ 0.44
UBQLN3-202ENST00000445998 GNPATO15228 680 aa17.83■□□□□ 0.44
UBQLN3-202ENST00000445998 ADRA2BP18089 450 aa17.83■□□□□ 0.44
UBQLN3-202ENST00000445998 R3HDM1Q15032 1099 aaKnown RBP17.83■□□□□ 0.44
UBQLN3-202ENST00000445998 ZNF827Q17R98 1081 aa17.83■□□□□ 0.44
UBQLN3-202ENST00000445998 USP16Q9Y5T5 823 aa17.83■□□□□ 0.44
UBQLN3-202ENST00000445998 LAMB4A4D0S4 1761 aa17.83■□□□□ 0.44
UBQLN3-202ENST00000445998 TRAPPC3LQ5T215 181 aa17.81■□□□□ 0.44
UBQLN3-202ENST00000445998 INTS5Q6P9B9 1019 aaKnown RBP17.81■□□□□ 0.44
UBQLN3-202ENST00000445998 SLC16A10Q8TF71 515 aa17.81■□□□□ 0.44
UBQLN3-202ENST00000445998 TUBGCP6Q96RT7 1819 aa17.81■□□□□ 0.44
UBQLN3-202ENST00000445998 ERBB4Q15303 1308 aa17.8■□□□□ 0.44
UBQLN3-202ENST00000445998 A0A087WZG4 1122 aa17.79■□□□□ 0.44
UBQLN3-202ENST00000445998 IL6STP40189 918 aaPredicted RBP17.79■□□□□ 0.44
UBQLN3-202ENST00000445998 DUSP27Q5VZP5 1158 aa17.79■□□□□ 0.44
UBQLN3-202ENST00000445998 TSR2Q969E8 191 aaKnown RBP17.79■□□□□ 0.44
UBQLN3-202ENST00000445998 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.78■□□□□ 0.44
UBQLN3-202ENST00000445998 PRAMEF22A3QJZ6 481 aa17.78■□□□□ 0.44
UBQLN3-202ENST00000445998 PSDA5PKW4 1024 aaPredicted RBP17.78■□□□□ 0.44
UBQLN3-202ENST00000445998 MSH5O43196 834 aa17.78■□□□□ 0.44
UBQLN3-202ENST00000445998 A1BGP04217 495 aa17.78■□□□□ 0.44
UBQLN3-202ENST00000445998 EIF2S2P20042 333 aaKnown RBP17.78■□□□□ 0.44
UBQLN3-202ENST00000445998 CANXP27824 592 aaKnown RBP17.78■□□□□ 0.44
UBQLN3-202ENST00000445998 SLFN5Q08AF3 891 aa17.78■□□□□ 0.44
UBQLN3-202ENST00000445998 CACNA1FO60840 1977 aa17.78■□□□□ 0.44
UBQLN3-202ENST00000445998 PNPLA7Q6ZV29 1317 aa17.77■□□□□ 0.44
UBQLN3-202ENST00000445998 FANCIQ9NVI1 1328 aa17.77■□□□□ 0.44
UBQLN3-202ENST00000445998 RFC4P35249 363 aa17.77■□□□□ 0.44
UBQLN3-202ENST00000445998 ZBTB1Q9Y2K1 713 aa17.77■□□□□ 0.44
UBQLN3-202ENST00000445998 ZBED9Q6R2W3 1325 aa17.76■□□□□ 0.43
UBQLN3-202ENST00000445998 PHF14O94880 888 aa17.76■□□□□ 0.43
UBQLN3-202ENST00000445998 EIF5P55010 431 aaKnown RBP17.76■□□□□ 0.43
UBQLN3-202ENST00000445998 TWISTNBQ3B726 338 aaPredicted RBP17.76■□□□□ 0.43
UBQLN3-202ENST00000445998 HDGFL1Q5TGJ6 251 aa17.76■□□□□ 0.43
UBQLN3-202ENST00000445998 CCDC30Q5VVM6 783 aa17.76■□□□□ 0.43
UBQLN3-202ENST00000445998 COL23A1Q86Y22 540 aaPredicted RBP17.76■□□□□ 0.43
UBQLN3-202ENST00000445998 C8orf58Q8NAV2 365 aa17.76■□□□□ 0.43
UBQLN3-202ENST00000445998 ARHGEF1Q92888 912 aaKnown RBP17.76■□□□□ 0.43
UBQLN3-202ENST00000445998 ELL2O00472 640 aaPredicted RBP17.75■□□□□ 0.43
UBQLN3-202ENST00000445998 ZPR1O75312 459 aa17.75■□□□□ 0.43
UBQLN3-202ENST00000445998 KRT24Q2M2I5 525 aa17.75■□□□□ 0.43
UBQLN3-202ENST00000445998 SPINK5Q9NQ38 1064 aaPredicted RBP17.75■□□□□ 0.43
UBQLN3-202ENST00000445998 DBF4Q9UBU7 674 aaPredicted RBP17.75■□□□□ 0.43
UBQLN3-202ENST00000445998 CASZ1Q86V15 1759 aa17.74■□□□□ 0.43
UBQLN3-202ENST00000445998 EXOSC9Q06265 439 aaKnown RBP17.74■□□□□ 0.43
UBQLN3-202ENST00000445998 TRMT2AQ8IZ69 625 aaKnown RBP17.74■□□□□ 0.43
UBQLN3-202ENST00000445998 DDX21Q9NR30 783 aaKnown RBP eCLIP17.74■□□□□ 0.43
UBQLN3-202ENST00000445998 COL15A1P39059 1388 aa17.74■□□□□ 0.43
UBQLN3-202ENST00000445998 MTFR1LQ9H019 292 aa17.73■□□□□ 0.43
UBQLN3-202ENST00000445998 ZNF330Q9Y3S2 320 aaPredicted RBP17.73■□□□□ 0.43
UBQLN3-202ENST00000445998 NBPF26B4DH59 902 aa17.72■□□□□ 0.43
UBQLN3-202ENST00000445998 NBPF10Q6P3W6 841 aaKnown RBP17.72■□□□□ 0.43
UBQLN3-202ENST00000445998 NBPF15Q8N660 670 aa17.72■□□□□ 0.43
UBQLN3-202ENST00000445998 TSPYL6Q8N831 410 aa17.72■□□□□ 0.43
UBQLN3-202ENST00000445998 CDCA7LQ96GN5 454 aa17.72■□□□□ 0.43
UBQLN3-202ENST00000445998 STK31Q9BXU1 1019 aa17.72■□□□□ 0.43
UBQLN3-202ENST00000445998 HYPKQ9NX55 129 aa17.72■□□□□ 0.43
UBQLN3-202ENST00000445998 NARFQ9UHQ1 456 aa17.72■□□□□ 0.43
UBQLN3-202ENST00000445998 CT47B1P0C2W7 299 aaPredicted RBP17.71■□□□□ 0.43
UBQLN3-202ENST00000445998 MYL6BP14649 208 aa17.71■□□□□ 0.43
UBQLN3-202ENST00000445998 NLGN1Q8N2Q7 840 aa17.71■□□□□ 0.43
UBQLN3-202ENST00000445998 NECTIN2Q92692 538 aa17.71■□□□□ 0.43
UBQLN3-202ENST00000445998 ZNF428Q96B54 188 aa17.71■□□□□ 0.43
UBQLN3-202ENST00000445998 ARXQ96QS3 562 aa17.71■□□□□ 0.43
UBQLN3-202ENST00000445998 SPON1Q9HCB6 807 aa17.71■□□□□ 0.43
UBQLN3-202ENST00000445998 C4AP0C0L4 1744 aa17.71■□□□□ 0.43
UBQLN3-202ENST00000445998 RGL2O15211 777 aa17.7■□□□□ 0.42
UBQLN3-202ENST00000445998 VAMP4O75379 141 aa17.7■□□□□ 0.42
UBQLN3-202ENST00000445998 AMIGO3Q86WK7 504 aa17.7■□□□□ 0.42
UBQLN3-202ENST00000445998 DZIP3Q86Y13 1208 aaKnown RBP17.7■□□□□ 0.42
UBQLN3-202ENST00000445998 PIP4K2AP48426 406 aaPredicted RBP17.69■□□□□ 0.42
UBQLN3-202ENST00000445998 PDIA6Q15084 440 aa17.69■□□□□ 0.42
UBQLN3-202ENST00000445998 CHPF2Q9P2E5 772 aa17.69■□□□□ 0.42
UBQLN3-202ENST00000445998 ZNF652Q9Y2D9 606 aa17.69■□□□□ 0.42
UBQLN3-202ENST00000445998 USP42Q9H9J4 1324 aaKnown RBP17.69■□□□□ 0.42
UBQLN3-202ENST00000445998 CLEC4GQ6UXB4 293 aa17.68■□□□□ 0.42
UBQLN3-202ENST00000445998 KIF6Q6ZMV9 814 aa17.68■□□□□ 0.42
UBQLN3-202ENST00000445998 SMIM5Q71RC9 77 aa17.68■□□□□ 0.42
UBQLN3-202ENST00000445998 PDGFDQ9GZP0 370 aaPredicted RBP17.68■□□□□ 0.42
UBQLN3-202ENST00000445998 TBC1D2BQ9UPU7 963 aa17.68■□□□□ 0.42
UBQLN3-202ENST00000445998 ERVV-1B6SEH8 477 aa17.67■□□□□ 0.42
UBQLN3-202ENST00000445998 ZBTB7AO95365 584 aa17.67■□□□□ 0.42
UBQLN3-202ENST00000445998 GYS1P13807 737 aa17.67■□□□□ 0.42
UBQLN3-202ENST00000445998 POLD1P28340 1107 aa17.67■□□□□ 0.42
UBQLN3-202ENST00000445998 USPL1Q5W0Q7 1092 aa17.67■□□□□ 0.42
UBQLN3-202ENST00000445998 ATF5Q9Y2D1 282 aaPredicted RBP17.66■□□□□ 0.42
UBQLN3-202ENST00000445998 COL24A1Q17RW2 1714 aa17.66■□□□□ 0.42
UBQLN3-202ENST00000445998 DDX58O95786 925 aaKnown RBP17.65■□□□□ 0.42
UBQLN3-202ENST00000445998 SLC4A2P04920 1241 aa17.65■□□□□ 0.42
UBQLN3-202ENST00000445998 COPS6Q7L5N1 327 aa17.65■□□□□ 0.42
UBQLN3-202ENST00000445998 SRP68Q9UHB9 627 aaKnown RBP17.65■□□□□ 0.42
UBQLN3-202ENST00000445998 MAP3K15Q6ZN16 1313 aa17.65■□□□□ 0.42
UBQLN3-202ENST00000445998 NUP98P52948 1817 aa17.65■□□□□ 0.42
UBQLN3-202ENST00000445998 BCORQ6W2J9 1755 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms