RNA–Protein interactions for RNA: ENST00000443945.6

LRCH1-204, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

TSL 1 (best)

Gene LRCH1, Length 2,070 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-204ENST00000443945 SLC16A10Q8TF71 515 aa23.79■■□□□ 1.4
LRCH1-204ENST00000443945 SGIP1Q9BQI5 828 aa23.79■■□□□ 1.4
LRCH1-204ENST00000443945 ARHGEF1Q92888 912 aaKnown RBP23.78■■□□□ 1.4
LRCH1-204ENST00000443945 TRAPPC3LQ5T215 181 aa23.77■■□□□ 1.4
LRCH1-204ENST00000443945 LAS1LQ9Y4W2 734 aaKnown RBP23.77■■□□□ 1.4
LRCH1-204ENST00000443945 USP16Q9Y5T5 823 aa23.77■■□□□ 1.4
LRCH1-204ENST00000443945 GOLGB1Q14789 3259 aaKnown RBP23.77■■□□□ 1.4
LRCH1-204ENST00000443945 KDM3BQ7LBC6 1761 aa23.77■■□□□ 1.4
LRCH1-204ENST00000443945 CANXP27824 592 aaKnown RBP23.77■■□□□ 1.4
LRCH1-204ENST00000443945 PIP4K2AP48426 406 aaPredicted RBP23.77■■□□□ 1.4
LRCH1-204ENST00000443945 TSPYL4Q9UJ04 414 aa23.76■■□□□ 1.39
LRCH1-204ENST00000443945 STARD3NLO95772 234 aa23.75■■□□□ 1.39
LRCH1-204ENST00000443945 A1BGP04217 495 aa23.75■■□□□ 1.39
LRCH1-204ENST00000443945 SRP68Q9UHB9 627 aaKnown RBP23.74■■□□□ 1.39
LRCH1-204ENST00000443945 SALL2Q9Y467 1007 aaPredicted RBP23.74■■□□□ 1.39
LRCH1-204ENST00000443945 EIF4A1P60842 406 aaKnown RBP23.74■■□□□ 1.39
LRCH1-204ENST00000443945 ZNF330Q9Y3S2 320 aaPredicted RBP23.74■■□□□ 1.39
LRCH1-204ENST00000443945 C4AP0C0L4 1744 aa23.73■■□□□ 1.39
LRCH1-204ENST00000443945 SNRPA1P09661 255 aaKnown RBP23.73■■□□□ 1.39
LRCH1-204ENST00000443945 RFC4P35249 363 aa23.73■■□□□ 1.39
LRCH1-204ENST00000443945 SOS1Q07889 1333 aaPredicted RBP23.73■■□□□ 1.39
LRCH1-204ENST00000443945 MIER1Q8N108 512 aa23.72■■□□□ 1.39
LRCH1-204ENST00000443945 ARXQ96QS3 562 aa23.71■■□□□ 1.39
LRCH1-204ENST00000443945 TEX13AQ9BXU3 409 aaPredicted RBP23.71■■□□□ 1.39
LRCH1-204ENST00000443945 UTRNP46939 3433 aa23.71■■□□□ 1.39
LRCH1-204ENST00000443945 ADRA2BP18089 450 aa23.71■■□□□ 1.39
LRCH1-204ENST00000443945 POLD1P28340 1107 aa23.71■■□□□ 1.39
LRCH1-204ENST00000443945 KLHL34Q8N239 644 aa23.71■■□□□ 1.39
LRCH1-204ENST00000443945 KRT24Q2M2I5 525 aa23.7■■□□□ 1.38
LRCH1-204ENST00000443945 COL15A1P39059 1388 aa23.7■■□□□ 1.38
LRCH1-204ENST00000443945 GIGYF1O75420 1035 aaPredicted RBP23.69■■□□□ 1.38
LRCH1-204ENST00000443945 FHDC1Q9C0D6 1143 aaPredicted RBP23.69■■□□□ 1.38
LRCH1-204ENST00000443945 COL24A1Q17RW2 1714 aa23.68■■□□□ 1.38
LRCH1-204ENST00000443945 CHL1O00533 1208 aa23.68■■□□□ 1.38
LRCH1-204ENST00000443945 GYS1P13807 737 aa23.68■■□□□ 1.38
LRCH1-204ENST00000443945 CCER2I3L3R5 266 aa23.67■■□□□ 1.38
LRCH1-204ENST00000443945 USP42Q9H9J4 1324 aaKnown RBP23.67■■□□□ 1.38
LRCH1-204ENST00000443945 EIF5P55010 431 aaKnown RBP23.66■■□□□ 1.38
LRCH1-204ENST00000443945 USPL1Q5W0Q7 1092 aa23.66■■□□□ 1.38
LRCH1-204ENST00000443945 NBPF26B4DH59 902 aa23.66■■□□□ 1.38
LRCH1-204ENST00000443945 FKBP8Q14318 412 aa23.66■■□□□ 1.38
LRCH1-204ENST00000443945 NBPF10Q6P3W6 841 aaKnown RBP23.66■■□□□ 1.38
LRCH1-204ENST00000443945 NBPF15Q8N660 670 aa23.66■■□□□ 1.38
LRCH1-204ENST00000443945 CFAP44Q96MT7 982 aa23.65■■□□□ 1.38
LRCH1-204ENST00000443945 MBIPQ9NS73 344 aa23.65■■□□□ 1.38
LRCH1-204ENST00000443945 TBC1D2BQ9UPU7 963 aa23.65■■□□□ 1.38
LRCH1-204ENST00000443945 MMP10P09238 476 aa23.64■■□□□ 1.38
LRCH1-204ENST00000443945 WWC1Q8IX03 1113 aa23.64■■□□□ 1.38
LRCH1-204ENST00000443945 RTN4Q9NQC3 1192 aaKnown RBP23.64■■□□□ 1.38
LRCH1-204ENST00000443945 ZPR1O75312 459 aa23.64■■□□□ 1.37
LRCH1-204ENST00000443945 NECTIN2Q92692 538 aa23.64■■□□□ 1.37
LRCH1-204ENST00000443945 BABAM1Q9NWV8 329 aa23.63■■□□□ 1.37
LRCH1-204ENST00000443945 LAMB4A4D0S4 1761 aa23.63■■□□□ 1.37
LRCH1-204ENST00000443945 EIF2S2P20042 333 aaKnown RBP23.63■■□□□ 1.37
LRCH1-204ENST00000443945 IL6STP40189 918 aaPredicted RBP23.63■■□□□ 1.37
LRCH1-204ENST00000443945 SYT17Q9BSW7 474 aa23.63■■□□□ 1.37
LRCH1-204ENST00000443945 NARFQ9UHQ1 456 aa23.62■■□□□ 1.37
LRCH1-204ENST00000443945 ZNF853P0CG23 659 aa23.61■■□□□ 1.37
LRCH1-204ENST00000443945 NLGN1Q8N2Q7 840 aa23.61■■□□□ 1.37
LRCH1-204ENST00000443945 NGEFQ8N5V2 710 aa23.61■■□□□ 1.37
LRCH1-204ENST00000443945 BCL2L12Q9HB09 334 aa23.61■■□□□ 1.37
LRCH1-204ENST00000443945 IFT57Q9NWB7 429 aa23.6■■□□□ 1.37
LRCH1-204ENST00000443945 MYL6BP14649 208 aa23.6■■□□□ 1.37
LRCH1-204ENST00000443945 TSR2Q969E8 191 aaKnown RBP23.6■■□□□ 1.37
LRCH1-204ENST00000443945 GNAI1P63096 354 aa23.59■■□□□ 1.37
LRCH1-204ENST00000443945 CCDC27Q2M243 656 aa23.59■■□□□ 1.37
LRCH1-204ENST00000443945 NPM2Q86SE8 214 aaKnown RBP23.59■■□□□ 1.37
LRCH1-204ENST00000443945 ANXA1P04083 346 aa23.58■■□□□ 1.37
LRCH1-204ENST00000443945 CALD1Q05682 793 aaKnown RBP23.58■■□□□ 1.37
LRCH1-204ENST00000443945 NLGN2Q8NFZ4 835 aa23.58■■□□□ 1.37
LRCH1-204ENST00000443945 ELL2O00472 640 aaPredicted RBP23.58■■□□□ 1.36
LRCH1-204ENST00000443945 DDR1Q08345 913 aa23.58■■□□□ 1.36
LRCH1-204ENST00000443945 DZIP3Q86Y13 1208 aaKnown RBP23.58■■□□□ 1.36
LRCH1-204ENST00000443945 BICDL1Q6ZP65 573 aa23.57■■□□□ 1.36
LRCH1-204ENST00000443945 A0A087WZG4 1122 aa23.56■■□□□ 1.36
LRCH1-204ENST00000443945 PROSER3Q2NL68 480 aa23.56■■□□□ 1.36
LRCH1-204ENST00000443945 CAMTA2O94983 1202 aa23.55■■□□□ 1.36
LRCH1-204ENST00000443945 NFIXQ14938 502 aa23.55■■□□□ 1.36
LRCH1-204ENST00000443945 DUSP27Q5VZP5 1158 aa23.55■■□□□ 1.36
LRCH1-204ENST00000443945 PARP3Q9Y6F1 533 aa23.54■■□□□ 1.36
LRCH1-204ENST00000443945 SCN7AQ01118 1682 aa23.54■■□□□ 1.36
LRCH1-204ENST00000443945 PDIA6Q15084 440 aa23.53■■□□□ 1.36
LRCH1-204ENST00000443945 C8orf58Q8NAV2 365 aa23.53■■□□□ 1.36
LRCH1-204ENST00000443945 TM4SF1P30408 202 aa23.53■■□□□ 1.36
LRCH1-204ENST00000443945 TBC1D9BQ66K14 1250 aa23.53■■□□□ 1.36
LRCH1-204ENST00000443945 TTLL7Q6ZT98 887 aa23.53■■□□□ 1.36
LRCH1-204ENST00000443945 SPINK5Q9NQ38 1064 aaPredicted RBP23.53■■□□□ 1.36
LRCH1-204ENST00000443945 WWC3Q9ULE0 1092 aa23.53■■□□□ 1.36
LRCH1-204ENST00000443945 POLRMTO00411 1230 aaKnown RBP23.52■■□□□ 1.35
LRCH1-204ENST00000443945 HDGFL1Q5TGJ6 251 aa23.52■■□□□ 1.35
LRCH1-204ENST00000443945 NCBP3Q53F19 620 aaKnown RBP23.51■■□□□ 1.35
LRCH1-204ENST00000443945 TSPYL6Q8N831 410 aa23.51■■□□□ 1.35
LRCH1-204ENST00000443945 CHPF2Q9P2E5 772 aa23.5■■□□□ 1.35
LRCH1-204ENST00000443945 HLFQ16534 295 aa23.5■■□□□ 1.35
LRCH1-204ENST00000443945 LRP10Q7Z4F1 713 aa23.5■■□□□ 1.35
LRCH1-204ENST00000443945 BCORQ6W2J9 1755 aa23.49■■□□□ 1.35
LRCH1-204ENST00000443945 ZBTB3Q9H5J0 574 aa23.49■■□□□ 1.35
LRCH1-204ENST00000443945 FANCIQ9NVI1 1328 aa23.48■■□□□ 1.35
LRCH1-204ENST00000443945 WDR63Q8IWG1 891 aa23.48■■□□□ 1.35
LRCH1-204ENST00000443945 CD2APQ9Y5K6 639 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms