RNA–Protein interactions for RNA: ENST00000442744.6

UBA52-202, Transcript of ubiquitin A-52 residue ribosomal protein fusion product 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA52, Length 2,845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52-202ENST00000442744 CCDC174Q6PII3 467 aa12.98□□□□□ -0.33
UBA52-202ENST00000442744 VPS37AQ8NEZ2 397 aa12.98□□□□□ -0.33
UBA52-202ENST00000442744 CCDC47Q96A33 483 aaKnown RBP12.98□□□□□ -0.33
UBA52-202ENST00000442744 FAM210AQ96ND0 272 aa12.98□□□□□ -0.33
UBA52-202ENST00000442744 GTF2F1P35269 517 aaKnown RBP eCLIP12.97□□□□□ -0.336e-8■■■■■ 28.8
UBA52-202ENST00000442744 IFT57Q9NWB7 429 aa12.97□□□□□ -0.33
UBA52-202ENST00000442744 ARHGEF12Q9NZN5 1544 aa12.97□□□□□ -0.33
UBA52-202ENST00000442744 HMMRO75330 724 aa12.97□□□□□ -0.33
UBA52-202ENST00000442744 SRPK2P78362 688 aaKnown RBP12.97□□□□□ -0.33
UBA52-202ENST00000442744 NUTM2GQ5VZR2 741 aa12.97□□□□□ -0.33
UBA52-202ENST00000442744 KANK3Q6NY19 840 aa12.97□□□□□ -0.33
UBA52-202ENST00000442744 C22orf23Q9BZE7 217 aa12.97□□□□□ -0.33
UBA52-202ENST00000442744 DDX56Q9NY93 547 aaKnown RBP12.97□□□□□ -0.33
UBA52-202ENST00000442744 ZHX1Q9UKY1 873 aaPredicted RBP12.97□□□□□ -0.33
UBA52-202ENST00000442744 TMEM88BA6NKF7 163 aa12.96□□□□□ -0.33
UBA52-202ENST00000442744 TSPY4P0CV99 314 aa12.96□□□□□ -0.33
UBA52-202ENST00000442744 TSPY10P0CW01 314 aa12.96□□□□□ -0.33
UBA52-202ENST00000442744 NLRP13Q86W25 1043 aa12.96□□□□□ -0.33
UBA52-202ENST00000442744 PER1O15534 1290 aaPredicted RBP12.96□□□□□ -0.34
UBA52-202ENST00000442744 CDC37Q16543 378 aaPredicted RBP12.96□□□□□ -0.34
UBA52-202ENST00000442744 PHF8Q9UPP1 1060 aa12.96□□□□□ -0.34
UBA52-202ENST00000442744 PARD3Q8TEW0 1356 aa12.96□□□□□ -0.34
UBA52-202ENST00000442744 KDM5DQ9BY66 1539 aa12.95□□□□□ -0.34
UBA52-202ENST00000442744 FILIP1Q7Z7B0 1213 aa12.95□□□□□ -0.34
UBA52-202ENST00000442744 PMFBP1Q8TBY8 1022 aa12.95□□□□□ -0.34
UBA52-202ENST00000442744 CUEDC1Q9NWM3 386 aaPredicted RBP12.95□□□□□ -0.34
UBA52-202ENST00000442744 DISP3Q9P2K9 1392 aa12.95□□□□□ -0.34
UBA52-202ENST00000442744 CD151P48509 253 aa12.95□□□□□ -0.34
UBA52-202ENST00000442744 UBE4AQ14139 1066 aa12.95□□□□□ -0.34
UBA52-202ENST00000442744 SAFB2Q14151 953 aaKnown RBP eCLIP12.95□□□□□ -0.34
UBA52-202ENST00000442744 C20orf194Q5TEA3 1177 aa12.95□□□□□ -0.34
UBA52-202ENST00000442744 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.95□□□□□ -0.345e-7■□□□□ 8.7
UBA52-202ENST00000442744 SUDS3Q9H7L9 328 aaPredicted RBP12.95□□□□□ -0.34
UBA52-202ENST00000442744 ZSWIM4Q9H7M6 989 aa12.95□□□□□ -0.34
UBA52-202ENST00000442744 KTN1Q86UP2 1357 aaKnown RBP12.95□□□□□ -0.34
UBA52-202ENST00000442744 ABCC10Q5T3U5 1492 aa12.94□□□□□ -0.34
UBA52-202ENST00000442744 PAX7P23759 505 aa12.94□□□□□ -0.34
UBA52-202ENST00000442744 ALDH8A1Q9H2A2 487 aaPredicted RBP12.94□□□□□ -0.34
UBA52-202ENST00000442744 RETREG1Q9H6L5 497 aa12.94□□□□□ -0.34
UBA52-202ENST00000442744 IPO5O00410 1097 aaKnown RBP12.94□□□□□ -0.34
UBA52-202ENST00000442744 CFAP53Q96M91 514 aa12.94□□□□□ -0.34
UBA52-202ENST00000442744 CRBNQ96SW2 442 aa12.94□□□□□ -0.34
UBA52-202ENST00000442744 BACH2Q9BYV9 841 aa12.94□□□□□ -0.34
UBA52-202ENST00000442744 CASQ1P31415 396 aa12.94□□□□□ -0.34
UBA52-202ENST00000442744 ALDH1L2Q3SY69 923 aa12.94□□□□□ -0.34
UBA52-202ENST00000442744 GAS2L2Q8NHY3 880 aa12.94□□□□□ -0.34
UBA52-202ENST00000442744 ATP10BO94823 1461 aa12.93□□□□□ -0.34
UBA52-202ENST00000442744 SHANK2Q9UPX8 1470 aa12.93□□□□□ -0.34
UBA52-202ENST00000442744 C7P10643 843 aa12.93□□□□□ -0.34
UBA52-202ENST00000442744 MAN1A1P33908 653 aa12.93□□□□□ -0.34
UBA52-202ENST00000442744 L1TD1Q5T7N2 865 aaKnown RBP12.93□□□□□ -0.34
UBA52-202ENST00000442744 NOL7Q9UMY1 257 aaKnown RBP12.93□□□□□ -0.34
UBA52-202ENST00000442744 PRAG1Q86YV5 1406 aa12.93□□□□□ -0.34
UBA52-202ENST00000442744 FGAP02671 866 aa12.93□□□□□ -0.34
UBA52-202ENST00000442744 IFT88Q13099 833 aa12.93□□□□□ -0.34
UBA52-202ENST00000442744 CYB5RLQ6IPT4 315 aa12.93□□□□□ -0.34
UBA52-202ENST00000442744 NBPF3Q9H094 633 aa12.93□□□□□ -0.34
UBA52-202ENST00000442744 TRPM1Q7Z4N2 1603 aa12.93□□□□□ -0.34
UBA52-202ENST00000442744 ATICP31939 592 aa12.92□□□□□ -0.34
UBA52-202ENST00000442744 PRKAG2Q9UGJ0 569 aa12.92□□□□□ -0.34
UBA52-202ENST00000442744 CEP83Q9Y592 693 aa12.92□□□□□ -0.34
UBA52-202ENST00000442744 SVIPQ8NHG7 77 aa12.92□□□□□ -0.34
UBA52-202ENST00000442744 PANK3Q9H999 370 aa12.92□□□□□ -0.34
UBA52-202ENST00000442744 AKAP2Q9Y2D5 859 aa12.92□□□□□ -0.34
UBA52-202ENST00000442744 SLC45A1Q9Y2W3 748 aa12.92□□□□□ -0.34
UBA52-202ENST00000442744 MRPL42Q9Y6G3 142 aaKnown RBP12.92□□□□□ -0.34
UBA52-202ENST00000442744 FAM135AQ9P2D6 1515 aa12.92□□□□□ -0.34
UBA52-202ENST00000442744 PTPRGP23470 1445 aa12.91□□□□□ -0.34
UBA52-202ENST00000442744 C16orf87Q6PH81 154 aa12.91□□□□□ -0.34
UBA52-202ENST00000442744 LSM14AQ8ND56 463 aaKnown RBP12.91□□□□□ -0.34
UBA52-202ENST00000442744 TTF2Q9UNY4 1162 aaKnown RBP12.91□□□□□ -0.34
UBA52-202ENST00000442744 KCNA2P16389 499 aa12.91□□□□□ -0.34
UBA52-202ENST00000442744 TSR2Q969E8 191 aaKnown RBP12.91□□□□□ -0.34
UBA52-202ENST00000442744 TESK2Q96S53 571 aa12.9□□□□□ -0.34
UBA52-202ENST00000442744 ABCA8O94911 1581 aa12.9□□□□□ -0.34
UBA52-202ENST00000442744 VAMP1P23763 118 aa12.9□□□□□ -0.34
UBA52-202ENST00000442744 SLC4A3P48751 1232 aa12.9□□□□□ -0.34
UBA52-202ENST00000442744 CHST12Q9NRB3 414 aa12.9□□□□□ -0.34
UBA52-202ENST00000442744 CCDC144AA2RUR9 1427 aa12.9□□□□□ -0.34
UBA52-202ENST00000442744 MICALL1Q8N3F8 863 aa12.89□□□□□ -0.35
UBA52-202ENST00000442744 SNRKQ9NRH2 765 aa12.89□□□□□ -0.35
UBA52-202ENST00000442744 PLA2R1Q13018 1463 aa12.89□□□□□ -0.35
UBA52-202ENST00000442744 A2MP01023 1474 aa12.89□□□□□ -0.35
UBA52-202ENST00000442744 FAM160A1Q05DH4 1040 aa12.89□□□□□ -0.35
UBA52-202ENST00000442744 U3KPZ7 1027 aaPredicted RBP12.89□□□□□ -0.35
UBA52-202ENST00000442744 POU5F1BQ06416 359 aa12.89□□□□□ -0.35
UBA52-202ENST00000442744 CFAP70Q5T0N1 1121 aa12.89□□□□□ -0.35
UBA52-202ENST00000442744 GJC2Q5T442 439 aaPredicted RBP12.89□□□□□ -0.35
UBA52-202ENST00000442744 RNF187Q5TA31 235 aaPredicted RBP12.89□□□□□ -0.35
UBA52-202ENST00000442744 PAF1Q8N7H5 531 aa12.89□□□□□ -0.35
UBA52-202ENST00000442744 SLC39A13Q96H72 371 aa12.89□□□□□ -0.35
UBA52-202ENST00000442744 CASS4Q9NQ75 786 aa12.89□□□□□ -0.35
UBA52-202ENST00000442744 MARSP56192 900 aaKnown RBP12.88□□□□□ -0.35
UBA52-202ENST00000442744 SYCP2LQ5T4T6 812 aa12.88□□□□□ -0.35
UBA52-202ENST00000442744 ARMC3Q5W041 872 aa12.88□□□□□ -0.35
UBA52-202ENST00000442744 CHCHD4Q8N4Q1 142 aa12.88□□□□□ -0.35
UBA52-202ENST00000442744 AS3MTQ9HBK9 375 aa12.88□□□□□ -0.35
UBA52-202ENST00000442744 RAVER1Q8IY67 606 aaKnown RBP12.88□□□□□ -0.35
UBA52-202ENST00000442744 GDPD2Q9HCC8 539 aa12.88□□□□□ -0.35
UBA52-202ENST00000442744 CGNQ9P2M7 1197 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms