RNA–Protein interactions for RNA: ENST00000440827.3

PXN-205, Transcript of paxillin, humanhuman

TSL 4

Gene PXN, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-205ENST00000440827 PARP3Q9Y6F1 533 aa21.29■■□□□ 1
PXN-205ENST00000440827 USP42Q9H9J4 1324 aaKnown RBP21.29■■□□□ 1
PXN-205ENST00000440827 FKBP8Q14318 412 aa21.28■■□□□ 1
PXN-205ENST00000440827 USPL1Q5W0Q7 1092 aa21.28■■□□□ 1
PXN-205ENST00000440827 MIS18AQ9NYP9 233 aa21.28■■□□□ 1
PXN-205ENST00000440827 CICQ96RK0 1608 aaPredicted RBP21.27■■□□□ 1
PXN-205ENST00000440827 TAF7Q15545 349 aaPredicted RBP21.27■■□□□ 1
PXN-205ENST00000440827 THUMPD2Q9BTF0 503 aaKnown RBP21.27■■□□□ 1
PXN-205ENST00000440827 PRKRIP1Q9H875 184 aaPredicted RBP21.27■■□□□ 1
PXN-205ENST00000440827 SIPA1L3O60292 1781 aaPredicted RBP21.26■□□□□ 0.99
PXN-205ENST00000440827 UBR2Q8IWV8 1755 aa21.26■□□□□ 0.99
PXN-205ENST00000440827 WDR43Q15061 677 aaKnown RBP eCLIP21.26■□□□□ 0.99
PXN-205ENST00000440827 COL15A1P39059 1388 aa21.25■□□□□ 0.99
PXN-205ENST00000440827 A1BGP04217 495 aa21.25■□□□□ 0.99
PXN-205ENST00000440827 C4AP0C0L4 1744 aa21.25■□□□□ 0.99
PXN-205ENST00000440827 YBX3P16989 372 aaKnown RBP eCLIP21.25■□□□□ 0.99
PXN-205ENST00000440827 CCDC146Q8IYE0 955 aa21.25■□□□□ 0.99
PXN-205ENST00000440827 NPM2Q86SE8 214 aaKnown RBP21.24■□□□□ 0.99
PXN-205ENST00000440827 NARFQ9UHQ1 456 aa21.24■□□□□ 0.99
PXN-205ENST00000440827 PRAMEF22A3QJZ6 481 aa21.23■□□□□ 0.99
PXN-205ENST00000440827 RIPK4P57078 832 aa21.23■□□□□ 0.99
PXN-205ENST00000440827 USP16Q9Y5T5 823 aa21.23■□□□□ 0.99
PXN-205ENST00000440827 GRIN3BO60391 1043 aa21.22■□□□□ 0.99
PXN-205ENST00000440827 SNRPA1P09661 255 aaKnown RBP21.22■□□□□ 0.99
PXN-205ENST00000440827 EIF5P55010 431 aaKnown RBP21.22■□□□□ 0.99
PXN-205ENST00000440827 DDR1Q08345 913 aa21.22■□□□□ 0.99
PXN-205ENST00000440827 NEUROD2Q15784 382 aa21.22■□□□□ 0.99
PXN-205ENST00000440827 RRP7AQ9Y3A4 280 aaKnown RBP21.22■□□□□ 0.99
PXN-205ENST00000440827 ZNF316A6NFI3 1004 aaPredicted RBP21.21■□□□□ 0.99
PXN-205ENST00000440827 PIP4K2AP48426 406 aaPredicted RBP21.21■□□□□ 0.99
PXN-205ENST00000440827 TBC1D2BQ9UPU7 963 aa21.21■□□□□ 0.99
PXN-205ENST00000440827 A0A087WZG4 1122 aa21.2■□□□□ 0.98
PXN-205ENST00000440827 A0A0G2JLW4 131 aa21.2■□□□□ 0.98
PXN-205ENST00000440827 BICDL1Q6ZP65 573 aa21.2■□□□□ 0.98
PXN-205ENST00000440827 PNISRQ8TF01 805 aaKnown RBP21.2■□□□□ 0.98
PXN-205ENST00000440827 TM4SF1P30408 202 aa21.19■□□□□ 0.98
PXN-205ENST00000440827 IL6STP40189 918 aaPredicted RBP21.19■□□□□ 0.98
PXN-205ENST00000440827 TMPOP42166 694 aaKnown RBP21.19■□□□□ 0.98
PXN-205ENST00000440827 ADAMTS8Q9UP79 889 aa21.19■□□□□ 0.98
PXN-205ENST00000440827 DLG5Q8TDM6 1919 aa21.19■□□□□ 0.98
PXN-205ENST00000440827 NFIXQ14938 502 aa21.18■□□□□ 0.98
PXN-205ENST00000440827 BCL2L12Q9HB09 334 aa21.18■□□□□ 0.98
PXN-205ENST00000440827 POLRMTO00411 1230 aaKnown RBP21.17■□□□□ 0.98
PXN-205ENST00000440827 TGFB2P61812 414 aa21.17■□□□□ 0.98
PXN-205ENST00000440827 C10orf71Q711Q0 1435 aa21.16■□□□□ 0.98
PXN-205ENST00000440827 DPEP1P16444 411 aa21.16■□□□□ 0.98
PXN-205ENST00000440827 RUNDC1Q96C34 613 aa21.16■□□□□ 0.98
PXN-205ENST00000440827 LMOD3Q0VAK6 560 aa21.15■□□□□ 0.98
PXN-205ENST00000440827 TSPYL4Q9UJ04 414 aa21.15■□□□□ 0.98
PXN-205ENST00000440827 BCS1LQ9Y276 419 aa21.15■□□□□ 0.98
PXN-205ENST00000440827 PXDNLA1KZ92 1463 aa21.14■□□□□ 0.98
PXN-205ENST00000440827 SERPINB2P05120 415 aa21.14■□□□□ 0.97
PXN-205ENST00000440827 DZIP3Q86Y13 1208 aaKnown RBP21.14■□□□□ 0.97
PXN-205ENST00000440827 EIF4A1P60842 406 aaKnown RBP21.13■□□□□ 0.97
PXN-205ENST00000440827 TBC1D9BQ66K14 1250 aa21.12■□□□□ 0.97
PXN-205ENST00000440827 NGEFQ8N5V2 710 aa21.12■□□□□ 0.97
PXN-205ENST00000440827 LAS1LQ9Y4W2 734 aaKnown RBP21.12■□□□□ 0.97
PXN-205ENST00000440827 CHD4Q14839 1912 aa21.12■□□□□ 0.97
PXN-205ENST00000440827 NBPF26B4DH59 902 aa21.11■□□□□ 0.97
PXN-205ENST00000440827 GIGYF1O75420 1035 aaPredicted RBP21.11■□□□□ 0.97
PXN-205ENST00000440827 CHRNA5P30532 468 aa21.11■□□□□ 0.97
PXN-205ENST00000440827 NBPF10Q6P3W6 841 aaKnown RBP21.11■□□□□ 0.97
PXN-205ENST00000440827 NBPF15Q8N660 670 aa21.11■□□□□ 0.97
PXN-205ENST00000440827 ZNF784Q8NCA9 323 aaPredicted RBP21.11■□□□□ 0.97
PXN-205ENST00000440827 UTRNP46939 3433 aa21.11■□□□□ 0.97
PXN-205ENST00000440827 N4BP2Q86UW6 1770 aaPredicted RBP21.1■□□□□ 0.97
PXN-205ENST00000440827 CAMTA2O94983 1202 aa21.1■□□□□ 0.97
PXN-205ENST00000440827 NPHP1O15259 732 aa21.09■□□□□ 0.97
PXN-205ENST00000440827 PIM2Q9P1W9 311 aa21.09■□□□□ 0.97
PXN-205ENST00000440827 GOLGB1Q14789 3259 aaKnown RBP21.09■□□□□ 0.97
PXN-205ENST00000440827 KIF13BQ9NQT8 1826 aa21.08■□□□□ 0.97
PXN-205ENST00000440827 KCNA3P22001 575 aa21.08■□□□□ 0.97
PXN-205ENST00000440827 CCDC184Q52MB2 194 aa21.08■□□□□ 0.97
PXN-205ENST00000440827 CCDC24Q8N4L8 307 aa21.08■□□□□ 0.97
PXN-205ENST00000440827 SETDB2Q96T68 719 aa21.08■□□□□ 0.97
PXN-205ENST00000440827 ANP32CO43423 234 aa21.07■□□□□ 0.96
PXN-205ENST00000440827 MYL6BP14649 208 aa21.07■□□□□ 0.96
PXN-205ENST00000440827 TRIM35Q9UPQ4 493 aa21.07■□□□□ 0.96
PXN-205ENST00000440827 KDM3BQ7LBC6 1761 aa21.07■□□□□ 0.96
PXN-205ENST00000440827 APAF1O14727 1248 aa21.06■□□□□ 0.96
PXN-205ENST00000440827 EIF2S2P20042 333 aaKnown RBP21.06■□□□□ 0.96
PXN-205ENST00000440827 DALRD3Q5D0E6 543 aaKnown RBP21.06■□□□□ 0.96
PXN-205ENST00000440827 ARHGAP27Q6ZUM4 889 aa21.06■□□□□ 0.96
PXN-205ENST00000440827 ZNF652Q9Y2D9 606 aa21.06■□□□□ 0.96
PXN-205ENST00000440827 KIAA1551Q9HCM1 1747 aa21.05■□□□□ 0.96
PXN-205ENST00000440827 C2CD5Q86YS7 1000 aa21.04■□□□□ 0.96
PXN-205ENST00000440827 BABAM1Q9NWV8 329 aa21.04■□□□□ 0.96
PXN-205ENST00000440827 CARMIL3Q8ND23 1372 aa21.04■□□□□ 0.96
PXN-205ENST00000440827 SENP3-EIF4A1A0A087X0R7 540 aa21.03■□□□□ 0.96
PXN-205ENST00000440827 NECTIN2Q92692 538 aa21.03■□□□□ 0.96
PXN-205ENST00000440827 AFDNP55196 1824 aaKnown RBP21.03■□□□□ 0.96
PXN-205ENST00000440827 SCN7AQ01118 1682 aa21.02■□□□□ 0.96
PXN-205ENST00000440827 FAM177BA6PVY3 158 aa21.02■□□□□ 0.96
PXN-205ENST00000440827 H0YIN7 160 aa21.02■□□□□ 0.96
PXN-205ENST00000440827 PRR5LQ6MZQ0 368 aa21.02■□□□□ 0.96
PXN-205ENST00000440827 CNBD1Q8NA66 436 aa21.02■□□□□ 0.96
PXN-205ENST00000440827 CHL1O00533 1208 aa21.01■□□□□ 0.95
PXN-205ENST00000440827 HLFQ16534 295 aa21.01■□□□□ 0.95
PXN-205ENST00000440827 CLEC4GQ6UXB4 293 aa21.01■□□□□ 0.95
PXN-205ENST00000440827 KIF6Q6ZMV9 814 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms