RNA–Protein interactions for RNA: ENST00000439176.5

ERCC8-203, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-203ENST00000439176 IFNL2Q8IZJ0 200 aa9.31□□□□□ -0.92
ERCC8-203ENST00000439176 AK7Q96M32 723 aa9.31□□□□□ -0.92
ERCC8-203ENST00000439176 TMOD3Q9NYL9 352 aa9.31□□□□□ -0.92
ERCC8-203ENST00000439176 NKX1-1Q15270 411 aaPredicted RBP9.3□□□□□ -0.92
ERCC8-203ENST00000439176 COL23A1Q86Y22 540 aaPredicted RBP9.3□□□□□ -0.92
ERCC8-203ENST00000439176 EYA1Q99502 592 aa9.3□□□□□ -0.92
ERCC8-203ENST00000439176 POLKQ9UBT6 870 aa9.3□□□□□ -0.92
ERCC8-203ENST00000439176 LY75O60449 1722 aa9.3□□□□□ -0.92
ERCC8-203ENST00000439176 QSER1Q2KHR3 1735 aa9.3□□□□□ -0.92
ERCC8-203ENST00000439176 SHANK3Q9BYB0 1731 aa9.29□□□□□ -0.92
ERCC8-203ENST00000439176 GRIN3BO60391 1043 aa9.29□□□□□ -0.92
ERCC8-203ENST00000439176 HSP90AB1P08238 724 aaKnown RBP9.29□□□□□ -0.92
ERCC8-203ENST00000439176 HSPA5P11021 654 aaKnown RBP9.29□□□□□ -0.92
ERCC8-203ENST00000439176 GOLGA2Q08379 1002 aa9.29□□□□□ -0.92
ERCC8-203ENST00000439176 ZNF784Q8NCA9 323 aaPredicted RBP9.29□□□□□ -0.92
ERCC8-203ENST00000439176 PIGBQ92521 554 aa9.29□□□□□ -0.92
ERCC8-203ENST00000439176 PANK3Q9H999 370 aa9.29□□□□□ -0.92
ERCC8-203ENST00000439176 STK24Q9Y6E0 443 aa9.29□□□□□ -0.92
ERCC8-203ENST00000439176 PLEKHG2Q9H7P9 1386 aa9.28□□□□□ -0.92
ERCC8-203ENST00000439176 EIF4A2Q14240 407 aaKnown RBP9.28□□□□□ -0.92
ERCC8-203ENST00000439176 MORC1Q86VD1 984 aa9.28□□□□□ -0.92
ERCC8-203ENST00000439176 KNSTRNQ9Y448 316 aa9.28□□□□□ -0.92
ERCC8-203ENST00000439176 MAP2P11137 1827 aaKnown RBP9.27□□□□□ -0.93
ERCC8-203ENST00000439176 LOC102724428A0A0B4J2F2 783 aa9.27□□□□□ -0.93
ERCC8-203ENST00000439176 PHKG2P15735 406 aa9.27□□□□□ -0.93
ERCC8-203ENST00000439176 ATP6V1AP38606 617 aa9.27□□□□□ -0.93
ERCC8-203ENST00000439176 SIK1P57059 783 aa9.27□□□□□ -0.93
ERCC8-203ENST00000439176 AMOTQ4VCS5 1084 aa9.27□□□□□ -0.93
ERCC8-203ENST00000439176 PLEKHO1Q53GL0 409 aaPredicted RBP9.27□□□□□ -0.93
ERCC8-203ENST00000439176 MSL1Q68DK7 614 aa9.27□□□□□ -0.93
ERCC8-203ENST00000439176 CD2APQ9Y5K6 639 aa9.27□□□□□ -0.93
ERCC8-203ENST00000439176 NCAPD2Q15021 1401 aa9.27□□□□□ -0.93
ERCC8-203ENST00000439176 ERVV-2B6SEH9 535 aa9.26□□□□□ -0.93
ERCC8-203ENST00000439176 PHF14O94880 888 aa9.26□□□□□ -0.93
ERCC8-203ENST00000439176 SSFA2P28290 1259 aa9.26□□□□□ -0.93
ERCC8-203ENST00000439176 FBXO22Q8NEZ5 403 aa9.26□□□□□ -0.93
ERCC8-203ENST00000439176 L3MBTL3Q96JM7 780 aaPredicted RBP9.26□□□□□ -0.93
ERCC8-203ENST00000439176 CHD4Q14839 1912 aa9.26□□□□□ -0.93
ERCC8-203ENST00000439176 UTRNP46939 3433 aa9.25□□□□□ -0.93
ERCC8-203ENST00000439176 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.25□□□□□ -0.93
ERCC8-203ENST00000439176 C1orf141Q5JVX7 400 aa9.25□□□□□ -0.93
ERCC8-203ENST00000439176 NLGN2Q8NFZ4 835 aa9.25□□□□□ -0.93
ERCC8-203ENST00000439176 DCAF5Q96JK2 942 aa9.25□□□□□ -0.93
ERCC8-203ENST00000439176 MS4A4AQ96JQ5 239 aa9.25□□□□□ -0.93
ERCC8-203ENST00000439176 MFRPQ9BY79 579 aa9.25□□□□□ -0.93
ERCC8-203ENST00000439176 ASAP1Q9ULH1 1129 aa9.25□□□□□ -0.93
ERCC8-203ENST00000439176 C5P01031 1676 aa9.25□□□□□ -0.93
ERCC8-203ENST00000439176 IGSF1Q8N6C5 1336 aa9.25□□□□□ -0.93
ERCC8-203ENST00000439176 PKD1L3Q7Z443 1732 aa9.25□□□□□ -0.93
ERCC8-203ENST00000439176 ANKRD26Q9UPS8 1709 aa9.25□□□□□ -0.93
ERCC8-203ENST00000439176 GNPATO15228 680 aa9.24□□□□□ -0.93
ERCC8-203ENST00000439176 MTHFSP49914 203 aa9.24□□□□□ -0.93
ERCC8-203ENST00000439176 CABP4P57796 275 aa9.24□□□□□ -0.93
ERCC8-203ENST00000439176 TUBGCP6Q96RT7 1819 aa9.24□□□□□ -0.93
ERCC8-203ENST00000439176 C4BP0C0L5 1744 aa9.23□□□□□ -0.93
ERCC8-203ENST00000439176 COL24A1Q17RW2 1714 aa9.23□□□□□ -0.93
ERCC8-203ENST00000439176 TRAPPC3LQ5T215 181 aa9.23□□□□□ -0.93
ERCC8-203ENST00000439176 ZNF530Q6P9A1 599 aaPredicted RBP9.23□□□□□ -0.93
ERCC8-203ENST00000439176 LINC00116Q8NCU8 138 aa9.23□□□□□ -0.93
ERCC8-203ENST00000439176 ATG3Q9NT62 314 aa9.23□□□□□ -0.93
ERCC8-203ENST00000439176 RTCBQ9Y3I0 505 aaKnown RBP9.23□□□□□ -0.93
ERCC8-203ENST00000439176 ITGB4P16144 1822 aa9.23□□□□□ -0.93
ERCC8-203ENST00000439176 SULT6B1Q6IMI4 303 aa9.22□□□□□ -0.93
ERCC8-203ENST00000439176 DPY19L2Q6NUT2 758 aa9.22□□□□□ -0.93
ERCC8-203ENST00000439176 TAF1LQ8IZX4 1826 aa9.21□□□□□ -0.93
ERCC8-203ENST00000439176 GIGYF1O75420 1035 aaPredicted RBP9.21□□□□□ -0.94
ERCC8-203ENST00000439176 YBX3P16989 372 aaKnown RBP eCLIP9.21□□□□□ -0.94
ERCC8-203ENST00000439176 RFC4P35249 363 aa9.21□□□□□ -0.94
ERCC8-203ENST00000439176 C1QTNF8P60827 252 aa9.21□□□□□ -0.94
ERCC8-203ENST00000439176 ITPK1Q13572 414 aa9.21□□□□□ -0.94
ERCC8-203ENST00000439176 RC3H1Q5TC82 1133 aaKnown RBP9.21□□□□□ -0.94
ERCC8-203ENST00000439176 NLGN1Q8N2Q7 840 aa9.21□□□□□ -0.94
ERCC8-203ENST00000439176 TOGARAM1Q9Y4F4 1720 aa9.21□□□□□ -0.94
ERCC8-203ENST00000439176 SENP3-EIF4A1A0A087X0R7 540 aa9.19□□□□□ -0.94
ERCC8-203ENST00000439176 MMP10P09238 476 aa9.19□□□□□ -0.94
ERCC8-203ENST00000439176 IL13P35225 146 aa9.19□□□□□ -0.94
ERCC8-203ENST00000439176 AMIGO3Q86WK7 504 aa9.19□□□□□ -0.94
ERCC8-203ENST00000439176 AEBP1Q8IUX7 1158 aa9.19□□□□□ -0.94
ERCC8-203ENST00000439176 NFATC2IPQ8NCF5 419 aa9.19□□□□□ -0.94
ERCC8-203ENST00000439176 CNTNAP4Q9C0A0 1308 aa9.19□□□□□ -0.94
ERCC8-203ENST00000439176 PTCD1O75127 700 aaKnown RBP9.18□□□□□ -0.94
ERCC8-203ENST00000439176 RPS6KA4O75676 772 aa9.18□□□□□ -0.94
ERCC8-203ENST00000439176 TGFB2P61812 414 aa9.18□□□□□ -0.94
ERCC8-203ENST00000439176 KIF7Q2M1P5 1343 aa9.18□□□□□ -0.94
ERCC8-203ENST00000439176 AKAP4Q5JQC9 854 aa9.18□□□□□ -0.94
ERCC8-203ENST00000439176 UBR3Q6ZT12 1888 aa9.18□□□□□ -0.94
ERCC8-203ENST00000439176 SMIM5Q71RC9 77 aa9.18□□□□□ -0.94
ERCC8-203ENST00000439176 GPBP1L1Q9HC44 474 aaPredicted RBP9.18□□□□□ -0.94
ERCC8-203ENST00000439176 CCDC87Q9NVE4 849 aa9.18□□□□□ -0.94
ERCC8-203ENST00000439176 PARP3Q9Y6F1 533 aa9.18□□□□□ -0.94
ERCC8-203ENST00000439176 GOLGB1Q14789 3259 aaKnown RBP9.18□□□□□ -0.94
ERCC8-203ENST00000439176 KDRP35968 1356 aa9.17□□□□□ -0.94
ERCC8-203ENST00000439176 DIAPH1O60610 1272 aaKnown RBP9.17□□□□□ -0.94
ERCC8-203ENST00000439176 CC2D1BQ5T0F9 858 aaKnown RBP9.17□□□□□ -0.94
ERCC8-203ENST00000439176 ARHGEF1Q92888 912 aaKnown RBP9.17□□□□□ -0.94
ERCC8-203ENST00000439176 KDM6AO15550 1401 aaPredicted RBP9.16□□□□□ -0.94
ERCC8-203ENST00000439176 SLC4A9Q96Q91 983 aa9.16□□□□□ -0.94
ERCC8-203ENST00000439176 ZPR1O75312 459 aa9.15□□□□□ -0.94
ERCC8-203ENST00000439176 HMOX1P09601 288 aa9.15□□□□□ -0.94
ERCC8-203ENST00000439176 GYS1P13807 737 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms