RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 RREB1Q92766 1687 aa21.66■■□□□ 1.06
CALD1-209ENST00000436461 HDGFL1Q5TGJ6 251 aa21.66■■□□□ 1.06
CALD1-209ENST00000436461 A1BGP04217 495 aa21.65■■□□□ 1.06
CALD1-209ENST00000436461 CYP19A1P11511 503 aaPredicted RBP21.65■■□□□ 1.06
CALD1-209ENST00000436461 C4BP0C0L5 1744 aa21.64■■□□□ 1.06
CALD1-209ENST00000436461 NUP188Q5SRE5 1749 aa21.64■■□□□ 1.06
CALD1-209ENST00000436461 ANXA1P04083 346 aa21.64■■□□□ 1.05
CALD1-209ENST00000436461 SLC27A3Q5K4L6 730 aa21.64■■□□□ 1.05
CALD1-209ENST00000436461 HOXB7P09629 217 aa21.63■■□□□ 1.05
CALD1-209ENST00000436461 BCL2L13Q9BXK5 485 aa21.63■■□□□ 1.05
CALD1-209ENST00000436461 CRKLP46109 303 aaKnown RBP21.62■■□□□ 1.05
CALD1-209ENST00000436461 ZBTB1Q9Y2K1 713 aa21.62■■□□□ 1.05
CALD1-209ENST00000436461 STARD3NLO95772 234 aa21.62■■□□□ 1.05
CALD1-209ENST00000436461 PROSER3Q2NL68 480 aa21.62■■□□□ 1.05
CALD1-209ENST00000436461 SMIM5Q71RC9 77 aa21.62■■□□□ 1.05
CALD1-209ENST00000436461 TEX13AQ9BXU3 409 aaPredicted RBP21.62■■□□□ 1.05
CALD1-209ENST00000436461 CHPF2Q9P2E5 772 aa21.62■■□□□ 1.05
CALD1-209ENST00000436461 NBPF26B4DH59 902 aa21.6■■□□□ 1.05
CALD1-209ENST00000436461 MYL6BP14649 208 aa21.6■■□□□ 1.05
CALD1-209ENST00000436461 CANXP27824 592 aaKnown RBP21.6■■□□□ 1.05
CALD1-209ENST00000436461 NBPF14Q5TI25 921 aa21.6■■□□□ 1.05
CALD1-209ENST00000436461 NBPF10Q6P3W6 841 aaKnown RBP21.6■■□□□ 1.05
CALD1-209ENST00000436461 INTS5Q6P9B9 1019 aaKnown RBP21.6■■□□□ 1.05
CALD1-209ENST00000436461 NBPF15Q8N660 670 aa21.6■■□□□ 1.05
CALD1-209ENST00000436461 ZNF330Q9Y3S2 320 aaPredicted RBP21.59■■□□□ 1.05
CALD1-209ENST00000436461 SOS1Q07889 1333 aaPredicted RBP21.59■■□□□ 1.05
CALD1-209ENST00000436461 PDIA6Q15084 440 aa21.58■■□□□ 1.05
CALD1-209ENST00000436461 ZNF827Q17R98 1081 aa21.58■■□□□ 1.05
CALD1-209ENST00000436461 CCDC30Q5VVM6 783 aa21.58■■□□□ 1.05
CALD1-209ENST00000436461 AMIGO3Q86WK7 504 aa21.58■■□□□ 1.05
CALD1-209ENST00000436461 SSH1Q8WYL5 1049 aa21.58■■□□□ 1.05
CALD1-209ENST00000436461 CCDC87Q9NVE4 849 aa21.58■■□□□ 1.05
CALD1-209ENST00000436461 TUBGCP6Q96RT7 1819 aa21.58■■□□□ 1.05
CALD1-209ENST00000436461 ANO8Q9HCE9 1232 aaPredicted RBP21.58■■□□□ 1.04
CALD1-209ENST00000436461 UBR3Q6ZT12 1888 aa21.57■■□□□ 1.04
CALD1-209ENST00000436461 CNTNAP4Q9C0A0 1308 aa21.57■■□□□ 1.04
CALD1-209ENST00000436461 GNPATO15228 680 aa21.57■■□□□ 1.04
CALD1-209ENST00000436461 RARSP54136 660 aaKnown RBP21.57■■□□□ 1.04
CALD1-209ENST00000436461 BCAR3O75815 825 aa21.56■■□□□ 1.04
CALD1-209ENST00000436461 CT47B1P0C2W7 299 aaPredicted RBP21.56■■□□□ 1.04
CALD1-209ENST00000436461 AK7Q96M32 723 aa21.56■■□□□ 1.04
CALD1-209ENST00000436461 SLC4A2P04920 1241 aa21.55■■□□□ 1.04
CALD1-209ENST00000436461 STK31Q9BXU1 1019 aa21.55■■□□□ 1.04
CALD1-209ENST00000436461 SMC4Q9NTJ3 1288 aa21.55■■□□□ 1.04
CALD1-209ENST00000436461 G2E3Q7L622 706 aa21.55■■□□□ 1.04
CALD1-209ENST00000436461 PHAXQ9H814 394 aaKnown RBP21.55■■□□□ 1.04
CALD1-209ENST00000436461 DDX21Q9NR30 783 aaKnown RBP eCLIP21.55■■□□□ 1.04
CALD1-209ENST00000436461 DBF4Q9UBU7 674 aaPredicted RBP21.55■■□□□ 1.04
CALD1-209ENST00000436461 RCAN3Q9UKA8 241 aa21.55■■□□□ 1.04
CALD1-209ENST00000436461 PHF14O94880 888 aa21.54■■□□□ 1.04
CALD1-209ENST00000436461 RC3H1Q5TC82 1133 aaKnown RBP21.54■■□□□ 1.04
CALD1-209ENST00000436461 LRP10Q7Z4F1 713 aa21.54■■□□□ 1.04
CALD1-209ENST00000436461 AKT1S1Q96B36 256 aa21.54■■□□□ 1.04
CALD1-209ENST00000436461 CACNA1FO60840 1977 aa21.54■■□□□ 1.04
CALD1-209ENST00000436461 MRPL50Q8N5N7 158 aaKnown RBP21.53■■□□□ 1.04
CALD1-209ENST00000436461 AIMP1Q12904 312 aaKnown RBP21.52■■□□□ 1.04
CALD1-209ENST00000436461 ERBB4Q15303 1308 aa21.52■■□□□ 1.04
CALD1-209ENST00000436461 ALDH1L2Q3SY69 923 aa21.51■■□□□ 1.03
CALD1-209ENST00000436461 ZNF428Q96B54 188 aa21.51■■□□□ 1.03
CALD1-209ENST00000436461 ARXQ96QS3 562 aa21.51■■□□□ 1.03
CALD1-209ENST00000436461 C4AP0C0L4 1744 aa21.51■■□□□ 1.03
CALD1-209ENST00000436461 RPS6KA4O75676 772 aa21.51■■□□□ 1.03
CALD1-209ENST00000436461 IL6STP40189 918 aaPredicted RBP21.51■■□□□ 1.03
CALD1-209ENST00000436461 EIF5P55010 431 aaKnown RBP21.51■■□□□ 1.03
CALD1-209ENST00000436461 TFCP2L1Q9NZI6 479 aa21.51■■□□□ 1.03
CALD1-209ENST00000436461 RTCBQ9Y3I0 505 aaKnown RBP21.51■■□□□ 1.03
CALD1-209ENST00000436461 COL15A1P39059 1388 aa21.5■■□□□ 1.03
CALD1-209ENST00000436461 TTLL7Q6ZT98 887 aa21.5■■□□□ 1.03
CALD1-209ENST00000436461 COPS6Q7L5N1 327 aa21.5■■□□□ 1.03
CALD1-209ENST00000436461 XAGE3Q8WTP9 111 aa21.5■■□□□ 1.03
CALD1-209ENST00000436461 SLC15A2Q16348 729 aa21.49■■□□□ 1.03
CALD1-209ENST00000436461 HYPKQ9NX55 129 aa21.49■■□□□ 1.03
CALD1-209ENST00000436461 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.48■■□□□ 1.03
CALD1-209ENST00000436461 CHMP4AQ9BY43 222 aa21.48■■□□□ 1.03
CALD1-209ENST00000436461 STK32BQ9NY57 414 aa21.48■■□□□ 1.03
CALD1-209ENST00000436461 TBC1D2BQ9UPU7 963 aa21.48■■□□□ 1.03
CALD1-209ENST00000436461 FLIIQ13045 1269 aa21.47■■□□□ 1.03
CALD1-209ENST00000436461 FRAT1Q92837 279 aaPredicted RBP21.47■■□□□ 1.03
CALD1-209ENST00000436461 ARHGEF1Q92888 912 aaKnown RBP21.47■■□□□ 1.03
CALD1-209ENST00000436461 NOB1Q9ULX3 412 aaKnown RBP21.47■■□□□ 1.03
CALD1-209ENST00000436461 NPM2Q86SE8 214 aaKnown RBP21.46■■□□□ 1.03
CALD1-209ENST00000436461 PNPLA7Q6ZV29 1317 aa21.46■■□□□ 1.03
CALD1-209ENST00000436461 FKBP5Q13451 457 aaPredicted RBP21.45■■□□□ 1.02
CALD1-209ENST00000436461 TRAPPC3LQ5T215 181 aa21.45■■□□□ 1.02
CALD1-209ENST00000436461 DZIP3Q86Y13 1208 aaKnown RBP21.45■■□□□ 1.02
CALD1-209ENST00000436461 ZBTB3Q9H5J0 574 aa21.45■■□□□ 1.02
CALD1-209ENST00000436461 SRP68Q9UHB9 627 aaKnown RBP21.45■■□□□ 1.02
CALD1-209ENST00000436461 TNNQ9UQP3 1299 aa21.45■■□□□ 1.02
CALD1-209ENST00000436461 ARFGEF2Q9Y6D5 1785 aa21.44■■□□□ 1.02
CALD1-209ENST00000436461 PLIN1O60240 522 aa21.44■■□□□ 1.02
CALD1-209ENST00000436461 SSFA2P28290 1259 aa21.44■■□□□ 1.02
CALD1-209ENST00000436461 COL23A1Q86Y22 540 aaPredicted RBP21.44■■□□□ 1.02
CALD1-209ENST00000436461 PDGFDQ9GZP0 370 aaPredicted RBP21.44■■□□□ 1.02
CALD1-209ENST00000436461 QSER1Q2KHR3 1735 aa21.44■■□□□ 1.02
CALD1-209ENST00000436461 BCORQ6W2J9 1755 aa21.44■■□□□ 1.02
CALD1-209ENST00000436461 SOCS7O14512 581 aa21.44■■□□□ 1.02
CALD1-209ENST00000436461 CENPBP07199 599 aaPredicted RBP21.44■■□□□ 1.02
CALD1-209ENST00000436461 F6X3S4 739 aa21.43■■□□□ 1.02
CALD1-209ENST00000436461 MSH5O43196 834 aa21.43■■□□□ 1.02
CALD1-209ENST00000436461 HMGB2P26583 209 aaKnown RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms