RNA–Protein interactions for RNA: ENST00000436216.1

EXT1-202, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 3

Gene EXT1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-202ENST00000436216 USP42Q9H9J4 1324 aaKnown RBP16.4■□□□□ 0.22
EXT1-202ENST00000436216 MMP10P09238 476 aa16.39■□□□□ 0.21
EXT1-202ENST00000436216 EIF5P55010 431 aaKnown RBP16.38■□□□□ 0.21
EXT1-202ENST00000436216 SRP68Q9UHB9 627 aaKnown RBP16.38■□□□□ 0.21
EXT1-202ENST00000436216 ADAMTS8Q9UP79 889 aa16.38■□□□□ 0.21
EXT1-202ENST00000436216 TMPOP42166 694 aaKnown RBP16.37■□□□□ 0.21
EXT1-202ENST00000436216 KLHL34Q8N239 644 aa16.37■□□□□ 0.21
EXT1-202ENST00000436216 PNISRQ8TF01 805 aaKnown RBP16.37■□□□□ 0.21
EXT1-202ENST00000436216 SNRPA1P09661 255 aaKnown RBP16.36■□□□□ 0.21
EXT1-202ENST00000436216 RIPK4P57078 832 aa16.36■□□□□ 0.21
EXT1-202ENST00000436216 FKBP8Q14318 412 aa16.36■□□□□ 0.21
EXT1-202ENST00000436216 WDR43Q15061 677 aaKnown RBP eCLIP16.36■□□□□ 0.21
EXT1-202ENST00000436216 RUNDC1Q96C34 613 aa16.36■□□□□ 0.21
EXT1-202ENST00000436216 NARFQ9UHQ1 456 aa16.36■□□□□ 0.21
EXT1-202ENST00000436216 USP16Q9Y5T5 823 aa16.36■□□□□ 0.21
EXT1-202ENST00000436216 COL15A1P39059 1388 aa16.36■□□□□ 0.21
EXT1-202ENST00000436216 A1BGP04217 495 aa16.35■□□□□ 0.21
EXT1-202ENST00000436216 CANXP27824 592 aaKnown RBP16.35■□□□□ 0.21
EXT1-202ENST00000436216 TM4SF1P30408 202 aa16.35■□□□□ 0.21
EXT1-202ENST00000436216 IL6STP40189 918 aaPredicted RBP16.35■□□□□ 0.21
EXT1-202ENST00000436216 THUMPD2Q9BTF0 503 aaKnown RBP16.35■□□□□ 0.21
EXT1-202ENST00000436216 MIS18AQ9NYP9 233 aa16.35■□□□□ 0.21
EXT1-202ENST00000436216 PRAMEF22A3QJZ6 481 aa16.34■□□□□ 0.21
EXT1-202ENST00000436216 ZPR1O75312 459 aa16.34■□□□□ 0.21
EXT1-202ENST00000436216 USPL1Q5W0Q7 1092 aa16.34■□□□□ 0.21
EXT1-202ENST00000436216 BCL2L12Q9HB09 334 aa16.34■□□□□ 0.21
EXT1-202ENST00000436216 KDM3BQ7LBC6 1761 aa16.33■□□□□ 0.21
EXT1-202ENST00000436216 A0A087WZG4 1122 aa16.33■□□□□ 0.2
EXT1-202ENST00000436216 LMOD3Q0VAK6 560 aa16.33■□□□□ 0.2
EXT1-202ENST00000436216 CCDC146Q8IYE0 955 aa16.33■□□□□ 0.2
EXT1-202ENST00000436216 PARP3Q9Y6F1 533 aa16.33■□□□□ 0.2
EXT1-202ENST00000436216 KIF13BQ9NQT8 1826 aa16.33■□□□□ 0.2
EXT1-202ENST00000436216 EIF4A1P60842 406 aaKnown RBP16.32■□□□□ 0.2
EXT1-202ENST00000436216 DDR1Q08345 913 aa16.32■□□□□ 0.2
EXT1-202ENST00000436216 GPR162Q16538 588 aa16.32■□□□□ 0.2
EXT1-202ENST00000436216 BABAM1Q9NWV8 329 aa16.32■□□□□ 0.2
EXT1-202ENST00000436216 C10orf71Q711Q0 1435 aa16.31■□□□□ 0.2
EXT1-202ENST00000436216 GIGYF1O75420 1035 aaPredicted RBP16.31■□□□□ 0.2
EXT1-202ENST00000436216 TGFB2P61812 414 aa16.31■□□□□ 0.2
EXT1-202ENST00000436216 CCDC184Q52MB2 194 aa16.31■□□□□ 0.2
EXT1-202ENST00000436216 TRIM35Q9UPQ4 493 aa16.31■□□□□ 0.2
EXT1-202ENST00000436216 POLRMTO00411 1230 aaKnown RBP16.3■□□□□ 0.2
EXT1-202ENST00000436216 YBX3P16989 372 aaKnown RBP eCLIP16.3■□□□□ 0.2
EXT1-202ENST00000436216 NFIXQ14938 502 aa16.3■□□□□ 0.2
EXT1-202ENST00000436216 RRP7AQ9Y3A4 280 aaKnown RBP16.3■□□□□ 0.2
EXT1-202ENST00000436216 NBPF26B4DH59 902 aa16.29■□□□□ 0.2
EXT1-202ENST00000436216 NBPF10Q6P3W6 841 aaKnown RBP16.29■□□□□ 0.2
EXT1-202ENST00000436216 NBPF15Q8N660 670 aa16.29■□□□□ 0.2
EXT1-202ENST00000436216 KIAA1551Q9HCM1 1747 aa16.28■□□□□ 0.2
EXT1-202ENST00000436216 GRIN3BO60391 1043 aa16.28■□□□□ 0.2
EXT1-202ENST00000436216 YY1P25490 414 aa16.28■□□□□ 0.2
EXT1-202ENST00000436216 NEUROD2Q15784 382 aa16.28■□□□□ 0.2
EXT1-202ENST00000436216 TBC1D2BQ9UPU7 963 aa16.28■□□□□ 0.2
EXT1-202ENST00000436216 PXDNLA1KZ92 1463 aa16.28■□□□□ 0.2
EXT1-202ENST00000436216 CHL1O00533 1208 aa16.27■□□□□ 0.2
EXT1-202ENST00000436216 CAMTA2O94983 1202 aa16.27■□□□□ 0.2
EXT1-202ENST00000436216 TSPYL4Q9UJ04 414 aa16.27■□□□□ 0.2
EXT1-202ENST00000436216 NRXN2Q9P2S2 1712 aa16.26■□□□□ 0.19
EXT1-202ENST00000436216 RGL2O15211 777 aa16.26■□□□□ 0.19
EXT1-202ENST00000436216 ANP32CO43423 234 aa16.26■□□□□ 0.19
EXT1-202ENST00000436216 PIP4K2AP48426 406 aaPredicted RBP16.26■□□□□ 0.19
EXT1-202ENST00000436216 PELP1Q8IZL8 1130 aaKnown RBP16.26■□□□□ 0.19
EXT1-202ENST00000436216 SCN7AQ01118 1682 aa16.26■□□□□ 0.19
EXT1-202ENST00000436216 LAMB4A4D0S4 1761 aa16.26■□□□□ 0.19
EXT1-202ENST00000436216 CHD4Q14839 1912 aa16.25■□□□□ 0.19
EXT1-202ENST00000436216 APAF1O14727 1248 aa16.25■□□□□ 0.19
EXT1-202ENST00000436216 KCNA3P22001 575 aa16.25■□□□□ 0.19
EXT1-202ENST00000436216 NPM2Q86SE8 214 aaKnown RBP16.25■□□□□ 0.19
EXT1-202ENST00000436216 DZIP3Q86Y13 1208 aaKnown RBP16.25■□□□□ 0.19
EXT1-202ENST00000436216 ZNF330Q9Y3S2 320 aaPredicted RBP16.25■□□□□ 0.19
EXT1-202ENST00000436216 A0A0G2JLW4 131 aa16.24■□□□□ 0.19
EXT1-202ENST00000436216 SERPINB2P05120 415 aa16.24■□□□□ 0.19
EXT1-202ENST00000436216 DPEP1P16444 411 aa16.24■□□□□ 0.19
EXT1-202ENST00000436216 TBC1D9BQ66K14 1250 aa16.24■□□□□ 0.19
EXT1-202ENST00000436216 CLEC4GQ6UXB4 293 aa16.24■□□□□ 0.19
EXT1-202ENST00000436216 AFDNP55196 1824 aaKnown RBP16.24■□□□□ 0.19
EXT1-202ENST00000436216 BCORQ6W2J9 1755 aa16.23■□□□□ 0.19
EXT1-202ENST00000436216 N4BP2Q86UW6 1770 aaPredicted RBP16.23■□□□□ 0.19
EXT1-202ENST00000436216 ERBB4Q15303 1308 aa16.22■□□□□ 0.19
EXT1-202ENST00000436216 BRCA1P38398 1863 aaKnown RBP16.21■□□□□ 0.19
EXT1-202ENST00000436216 ZNF853P0CG23 659 aa16.21■□□□□ 0.19
EXT1-202ENST00000436216 CFAP44Q96MT7 982 aa16.21■□□□□ 0.19
EXT1-202ENST00000436216 MRS2Q9HD23 443 aa16.21■□□□□ 0.19
EXT1-202ENST00000436216 PDIA6Q15084 440 aa16.2■□□□□ 0.18
EXT1-202ENST00000436216 BICDL1Q6ZP65 573 aa16.2■□□□□ 0.18
EXT1-202ENST00000436216 LRP10Q7Z4F1 713 aa16.2■□□□□ 0.18
EXT1-202ENST00000436216 SETDB2Q96T68 719 aa16.2■□□□□ 0.18
EXT1-202ENST00000436216 CARMIL3Q8ND23 1372 aa16.2■□□□□ 0.18
EXT1-202ENST00000436216 ERVV-1B6SEH8 477 aa16.19■□□□□ 0.18
EXT1-202ENST00000436216 NCBP3Q53F19 620 aaKnown RBP16.19■□□□□ 0.18
EXT1-202ENST00000436216 PIM2Q9P1W9 311 aa16.19■□□□□ 0.18
EXT1-202ENST00000436216 WWC3Q9ULE0 1092 aa16.19■□□□□ 0.18
EXT1-202ENST00000436216 ZNF652Q9Y2D9 606 aa16.19■□□□□ 0.18
EXT1-202ENST00000436216 CHRNA5P30532 468 aa16.18■□□□□ 0.18
EXT1-202ENST00000436216 CALD1Q05682 793 aaKnown RBP16.18■□□□□ 0.18
EXT1-202ENST00000436216 CCDC27Q2M243 656 aa16.18■□□□□ 0.18
EXT1-202ENST00000436216 PRR5LQ6MZQ0 368 aa16.18■□□□□ 0.18
EXT1-202ENST00000436216 IFT57Q9NWB7 429 aa16.18■□□□□ 0.18
EXT1-202ENST00000436216 HOXB7P09629 217 aa16.17■□□□□ 0.18
EXT1-202ENST00000436216 HLFQ16534 295 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms