RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 CABP4P57796 275 aa10.56□□□□□ -0.72
VPS50-203ENST00000436177 LCE2DQ5TA82 110 aaPredicted RBP10.56□□□□□ -0.72
VPS50-203ENST00000436177 LINC00116Q8NCU8 138 aa10.56□□□□□ -0.72
VPS50-203ENST00000436177 TOGARAM1Q9Y4F4 1720 aa10.55□□□□□ -0.72
VPS50-203ENST00000436177 GOLGB1Q14789 3259 aaKnown RBP10.55□□□□□ -0.72
VPS50-203ENST00000436177 C1QTNF8P60827 252 aa10.55□□□□□ -0.72
VPS50-203ENST00000436177 ATG3Q9NT62 314 aa10.55□□□□□ -0.72
VPS50-203ENST00000436177 RTCBQ9Y3I0 505 aaKnown RBP10.55□□□□□ -0.72
VPS50-203ENST00000436177 MTHFSP49914 203 aa10.54□□□□□ -0.72
VPS50-203ENST00000436177 ITPK1Q13572 414 aa10.54□□□□□ -0.72
VPS50-203ENST00000436177 IER5LQ5T953 404 aa10.54□□□□□ -0.72
VPS50-203ENST00000436177 CHD4Q14839 1912 aa10.54□□□□□ -0.72
VPS50-203ENST00000436177 MMP10P09238 476 aa10.53□□□□□ -0.72
VPS50-203ENST00000436177 TRAPPC3LQ5T215 181 aa10.53□□□□□ -0.72
VPS50-203ENST00000436177 SULT6B1Q6IMI4 303 aa10.53□□□□□ -0.72
VPS50-203ENST00000436177 SMIM5Q71RC9 77 aa10.53□□□□□ -0.72
VPS50-203ENST00000436177 AMIGO3Q86WK7 504 aa10.53□□□□□ -0.72
VPS50-203ENST00000436177 WWC3Q9ULE0 1092 aa10.53□□□□□ -0.72
VPS50-203ENST00000436177 COL24A1Q17RW2 1714 aa10.53□□□□□ -0.72
VPS50-203ENST00000436177 PTCD1O75127 700 aaKnown RBP10.52□□□□□ -0.73
VPS50-203ENST00000436177 RFC4P35249 363 aa10.52□□□□□ -0.73
VPS50-203ENST00000436177 AEBP1Q8IUX7 1158 aa10.52□□□□□ -0.73
VPS50-203ENST00000436177 NLGN1Q8N2Q7 840 aa10.52□□□□□ -0.73
VPS50-203ENST00000436177 GPBP1L1Q9HC44 474 aaPredicted RBP10.52□□□□□ -0.73
VPS50-203ENST00000436177 FBXO3Q9UK99 471 aa10.52□□□□□ -0.73
VPS50-203ENST00000436177 KDRP35968 1356 aa10.52□□□□□ -0.73
VPS50-203ENST00000436177 MAP2P11137 1827 aaKnown RBP10.51□□□□□ -0.73
VPS50-203ENST00000436177 ITGB4P16144 1822 aa10.51□□□□□ -0.73
VPS50-203ENST00000436177 ATP10DQ9P241 1426 aa10.51□□□□□ -0.73
VPS50-203ENST00000436177 RC3H1Q5TC82 1133 aaKnown RBP10.51□□□□□ -0.73
VPS50-203ENST00000436177 CCDC87Q9NVE4 849 aa10.51□□□□□ -0.73
VPS50-203ENST00000436177 CNTNAP4Q9C0A0 1308 aa10.51□□□□□ -0.73
VPS50-203ENST00000436177 TAF1LQ8IZX4 1826 aa10.51□□□□□ -0.73
VPS50-203ENST00000436177 KDM6AO15550 1401 aaPredicted RBP10.5□□□□□ -0.73
VPS50-203ENST00000436177 PLCG2P16885 1265 aa10.5□□□□□ -0.73
VPS50-203ENST00000436177 ZNF526Q8TF50 670 aaPredicted RBP10.5□□□□□ -0.73
VPS50-203ENST00000436177 PCDHB8Q9UN66 801 aa10.5□□□□□ -0.73
VPS50-203ENST00000436177 PARP3Q9Y6F1 533 aa10.5□□□□□ -0.73
VPS50-203ENST00000436177 RPS6KA4O75676 772 aa10.49□□□□□ -0.73
VPS50-203ENST00000436177 NFATC2IPQ8NCF5 419 aa10.49□□□□□ -0.73
VPS50-203ENST00000436177 UBR3Q6ZT12 1888 aa10.49□□□□□ -0.73
VPS50-203ENST00000436177 CRKLP46109 303 aaKnown RBP10.48□□□□□ -0.73
VPS50-203ENST00000436177 SLAIN1Q8ND83 568 aa10.48□□□□□ -0.73
VPS50-203ENST00000436177 ARHGEF1Q92888 912 aaKnown RBP10.48□□□□□ -0.73
VPS50-203ENST00000436177 BCS1LQ9Y276 419 aa10.48□□□□□ -0.73
VPS50-203ENST00000436177 KIF7Q2M1P5 1343 aa10.48□□□□□ -0.73
VPS50-203ENST00000436177 IL13P35225 146 aa10.47□□□□□ -0.73
VPS50-203ENST00000436177 TGFB2P61812 414 aa10.47□□□□□ -0.73
VPS50-203ENST00000436177 AKAP4Q5JQC9 854 aa10.47□□□□□ -0.73
VPS50-203ENST00000436177 AMER1Q5JTC6 1135 aaPredicted RBP10.47□□□□□ -0.73
VPS50-203ENST00000436177 CC2D1BQ5T0F9 858 aaKnown RBP10.47□□□□□ -0.73
VPS50-203ENST00000436177 SLC4A9Q96Q91 983 aa10.47□□□□□ -0.73
VPS50-203ENST00000436177 CICQ96RK0 1608 aaPredicted RBP10.47□□□□□ -0.73
VPS50-203ENST00000436177 DIAPH1O60610 1272 aaKnown RBP10.46□□□□□ -0.73
VPS50-203ENST00000436177 ZPR1O75312 459 aa10.46□□□□□ -0.73
VPS50-203ENST00000436177 HMOX1P09601 288 aa10.46□□□□□ -0.73
VPS50-203ENST00000436177 GYS1P13807 737 aa10.46□□□□□ -0.73
VPS50-203ENST00000436177 CNGB1Q14028 1251 aaPredicted RBP10.46□□□□□ -0.73
VPS50-203ENST00000436177 C10orf71Q711Q0 1435 aa10.46□□□□□ -0.74
VPS50-203ENST00000436177 PXDNLA1KZ92 1463 aa10.46□□□□□ -0.74
VPS50-203ENST00000436177 ADCY9O60503 1353 aa10.45□□□□□ -0.74
VPS50-203ENST00000436177 A0A0G2JLW4 131 aa10.45□□□□□ -0.74
VPS50-203ENST00000436177 FCHSD2O94868 740 aa10.45□□□□□ -0.74
VPS50-203ENST00000436177 ARHGAP27Q6ZUM4 889 aa10.45□□□□□ -0.74
VPS50-203ENST00000436177 TTC5Q8N0Z6 440 aa10.45□□□□□ -0.74
VPS50-203ENST00000436177 SLC52A2Q9HAB3 445 aa10.45□□□□□ -0.74
VPS50-203ENST00000436177 USP42Q9H9J4 1324 aaKnown RBP10.44□□□□□ -0.74
VPS50-203ENST00000436177 U2SURPO15042 1029 aaKnown RBP10.44□□□□□ -0.74
VPS50-203ENST00000436177 VASPP50552 380 aaPredicted RBP10.44□□□□□ -0.74
VPS50-203ENST00000436177 PCDH10Q9P2E7 1040 aa10.44□□□□□ -0.74
VPS50-203ENST00000436177 SRP68Q9UHB9 627 aaKnown RBP10.44□□□□□ -0.74
VPS50-203ENST00000436177 ZNF831Q5JPB2 1677 aa10.44□□□□□ -0.74
VPS50-203ENST00000436177 RNMTO43148 476 aaKnown RBP10.43□□□□□ -0.74
VPS50-203ENST00000436177 DPEP1P16444 411 aa10.43□□□□□ -0.74
VPS50-203ENST00000436177 IRX5P78411 483 aaPredicted RBP10.43□□□□□ -0.74
VPS50-203ENST00000436177 TEFQ10587 303 aa10.43□□□□□ -0.74
VPS50-203ENST00000436177 NPM2Q86SE8 214 aaKnown RBP10.43□□□□□ -0.74
VPS50-203ENST00000436177 CFAP53Q96M91 514 aa10.43□□□□□ -0.74
VPS50-203ENST00000436177 PIM2Q9P1W9 311 aa10.43□□□□□ -0.74
VPS50-203ENST00000436177 STARD3NLO95772 234 aa10.42□□□□□ -0.74
VPS50-203ENST00000436177 DALRD3Q5D0E6 543 aaKnown RBP10.42□□□□□ -0.74
VPS50-203ENST00000436177 DNAJC10Q8IXB1 793 aa10.42□□□□□ -0.74
VPS50-203ENST00000436177 C4AP0C0L4 1744 aa10.41□□□□□ -0.74
VPS50-203ENST00000436177 CEP350Q5VT06 3117 aa10.41□□□□□ -0.74
VPS50-203ENST00000436177 SLC39A6Q13433 755 aa10.41□□□□□ -0.74
VPS50-203ENST00000436177 MTHFSDQ2M296 383 aaKnown RBP10.41□□□□□ -0.74
VPS50-203ENST00000436177 INTS5Q6P9B9 1019 aaKnown RBP10.41□□□□□ -0.74
VPS50-203ENST00000436177 GAS2L2Q8NHY3 880 aa10.41□□□□□ -0.74
VPS50-203ENST00000436177 LGR6Q9HBX8 967 aa10.41□□□□□ -0.74
VPS50-203ENST00000436177 MRC1P22897 1456 aa10.41□□□□□ -0.74
VPS50-203ENST00000436177 COL15A1P39059 1388 aa10.4□□□□□ -0.74
VPS50-203ENST00000436177 NPC1L1Q9UHC9 1359 aa10.4□□□□□ -0.74
VPS50-203ENST00000436177 SOS1Q07889 1333 aaPredicted RBP10.4□□□□□ -0.74
VPS50-203ENST00000436177 CYP19A1P11511 503 aaPredicted RBP10.4□□□□□ -0.74
VPS50-203ENST00000436177 HSPA6P17066 643 aa10.4□□□□□ -0.74
VPS50-203ENST00000436177 DDR1Q08345 913 aa10.4□□□□□ -0.74
VPS50-203ENST00000436177 USPL1Q5W0Q7 1092 aa10.4□□□□□ -0.74
VPS50-203ENST00000436177 C16orf71Q8IYS4 520 aaPredicted RBP10.4□□□□□ -0.74
VPS50-203ENST00000436177 VSIG10Q8N0Z9 540 aa10.4□□□□□ -0.74
VPS50-203ENST00000436177 OCEL1Q9H607 264 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms