RNA–Protein interactions for RNA: ENST00000432331.1

LINC00390-201, long intergenic non-protein coding RNA 390, humanhuman

TSL 5 BASIC

Gene LINC00390, Length 340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00390-201ENST00000432331 DDX41Q9UJV9 622 aaKnown RBP8.3□□□□□ -1.08
LINC00390-201ENST00000432331 DDX49Q9Y6V7 483 aaKnown RBP8.3□□□□□ -1.08
LINC00390-201ENST00000432331 CPDO75976 1380 aa8.3□□□□□ -1.08
LINC00390-201ENST00000432331 JCADQ9P266 1359 aa8.3□□□□□ -1.08
LINC00390-201ENST00000432331 KIF16BQ96L93 1317 aa8.29□□□□□ -1.08
LINC00390-201ENST00000432331 PLIN1O60240 522 aa8.29□□□□□ -1.08
LINC00390-201ENST00000432331 CALRP27797 417 aaKnown RBP8.29□□□□□ -1.08
LINC00390-201ENST00000432331 AMPHP49418 695 aa8.29□□□□□ -1.08
LINC00390-201ENST00000432331 NUCB2P80303 420 aa8.29□□□□□ -1.08
LINC00390-201ENST00000432331 WDR43Q15061 677 aaKnown RBP eCLIP8.29□□□□□ -1.08
LINC00390-201ENST00000432331 MUM1L1Q5H9M0 696 aa8.29□□□□□ -1.08
LINC00390-201ENST00000432331 CLUAP1Q96AJ1 413 aa8.29□□□□□ -1.08
LINC00390-201ENST00000432331 CARD10Q9BWT7 1032 aa8.29□□□□□ -1.08
LINC00390-201ENST00000432331 SHPRHQ149N8 1683 aa8.29□□□□□ -1.08
LINC00390-201ENST00000432331 KIAA0232Q92628 1395 aa8.28□□□□□ -1.08
LINC00390-201ENST00000432331 ZBTB7CA1YPR0 619 aa8.28□□□□□ -1.08
LINC00390-201ENST00000432331 TULP1O00294 542 aaPredicted RBP8.28□□□□□ -1.08
LINC00390-201ENST00000432331 CLSTN1O94985 981 aa8.28□□□□□ -1.08
LINC00390-201ENST00000432331 REC8O95072 547 aa8.28□□□□□ -1.08
LINC00390-201ENST00000432331 MBD3O95983 291 aa8.28□□□□□ -1.08
LINC00390-201ENST00000432331 SATB1Q01826 763 aa8.28□□□□□ -1.08
LINC00390-201ENST00000432331 LMOD3Q0VAK6 560 aa8.28□□□□□ -1.08
LINC00390-201ENST00000432331 NOLC1Q14978 699 aaKnown RBP eCLIP8.28□□□□□ -1.08
LINC00390-201ENST00000432331 RNF20Q5VTR2 975 aa8.28□□□□□ -1.08
LINC00390-201ENST00000432331 ARHGEF25Q86VW2 580 aa8.28□□□□□ -1.08
LINC00390-201ENST00000432331 TICAM2Q86XR7 235 aa8.28□□□□□ -1.08
LINC00390-201ENST00000432331 GOLGA6L1Q8N7Z2 621 aa8.28□□□□□ -1.08
LINC00390-201ENST00000432331 CABLES1Q8TDN4 633 aa8.28□□□□□ -1.08
LINC00390-201ENST00000432331 SYAP1Q96A49 352 aaPredicted RBP8.28□□□□□ -1.08
LINC00390-201ENST00000432331 CFAP44Q96MT7 982 aa8.28□□□□□ -1.08
LINC00390-201ENST00000432331 RASSF4Q9H2L5 321 aa8.28□□□□□ -1.08
LINC00390-201ENST00000432331 SMC4Q9NTJ3 1288 aa8.28□□□□□ -1.08
LINC00390-201ENST00000432331 FEZ2Q9UHY8 353 aaPredicted RBP8.28□□□□□ -1.08
LINC00390-201ENST00000432331 PEAK1Q9H792 1746 aa8.28□□□□□ -1.08
LINC00390-201ENST00000432331 DIAPH1O60610 1272 aaKnown RBP8.27□□□□□ -1.09
LINC00390-201ENST00000432331 CAPN2P17655 700 aa8.27□□□□□ -1.09
LINC00390-201ENST00000432331 FBLN1P23142 703 aa8.27□□□□□ -1.09
LINC00390-201ENST00000432331 HOXC9P31274 260 aa8.27□□□□□ -1.09
LINC00390-201ENST00000432331 BRPF1P55201 1214 aaPredicted RBP8.27□□□□□ -1.09
LINC00390-201ENST00000432331 ZSCAN23Q3MJ62 389 aa8.27□□□□□ -1.09
LINC00390-201ENST00000432331 SLFNL1Q499Z3 407 aa8.27□□□□□ -1.09
LINC00390-201ENST00000432331 DUSP27Q5VZP5 1158 aa8.27□□□□□ -1.09
LINC00390-201ENST00000432331 ICE2Q659A1 982 aa8.27□□□□□ -1.09
LINC00390-201ENST00000432331 LRSAM1Q6UWE0 723 aa8.27□□□□□ -1.09
LINC00390-201ENST00000432331 RPAINQ86UA6 219 aa8.27□□□□□ -1.09
LINC00390-201ENST00000432331 SKAP1Q86WV1 359 aa8.27□□□□□ -1.09
LINC00390-201ENST00000432331 PRDM11Q9NQV5 511 aa8.27□□□□□ -1.09
LINC00390-201ENST00000432331 CTNNA3Q9UI47 895 aa8.27□□□□□ -1.09
LINC00390-201ENST00000432331 CEP83Q9Y592 693 aa8.27□□□□□ -1.09
LINC00390-201ENST00000432331 SPATA31A6Q5VVP1 1343 aa8.27□□□□□ -1.09
LINC00390-201ENST00000432331 ZNF521Q96K83 1311 aa8.27□□□□□ -1.09
LINC00390-201ENST00000432331 SEC24BO95487 1268 aa8.26□□□□□ -1.09
LINC00390-201ENST00000432331 HSPA1LP34931 641 aa8.26□□□□□ -1.09
LINC00390-201ENST00000432331 GTF2A1P52655 376 aaPredicted RBP8.26□□□□□ -1.09
LINC00390-201ENST00000432331 ZC3H6P61129 1189 aaKnown RBP8.26□□□□□ -1.09
LINC00390-201ENST00000432331 GOLGA2Q08379 1002 aa8.26□□□□□ -1.09
LINC00390-201ENST00000432331 MKRN4PQ13434 485 aaPredicted RBP8.26□□□□□ -1.09
LINC00390-201ENST00000432331 C20orf194Q5TEA3 1177 aa8.26□□□□□ -1.09
LINC00390-201ENST00000432331 CAVIN1Q6NZI2 390 aaKnown RBP8.26□□□□□ -1.09
LINC00390-201ENST00000432331 TXLNBQ8N3L3 684 aa8.26□□□□□ -1.09
LINC00390-201ENST00000432331 IP6K1Q92551 441 aa8.26□□□□□ -1.09
LINC00390-201ENST00000432331 CWC15Q9P013 229 aaKnown RBP8.26□□□□□ -1.09
LINC00390-201ENST00000432331 RAI14Q9P0K7 980 aa8.26□□□□□ -1.09
LINC00390-201ENST00000432331 LTN1O94822 1766 aa8.25□□□□□ -1.09
LINC00390-201ENST00000432331 E9PSI1 815 aa8.25□□□□□ -1.09
LINC00390-201ENST00000432331 U2SURPO15042 1029 aaKnown RBP8.25□□□□□ -1.09
LINC00390-201ENST00000432331 BAG4O95429 457 aaKnown RBP8.25□□□□□ -1.09
LINC00390-201ENST00000432331 CCDC172P0C7W6 258 aa8.25□□□□□ -1.09
LINC00390-201ENST00000432331 GUCY2CP25092 1073 aa8.25□□□□□ -1.09
LINC00390-201ENST00000432331 U2AF2P26368 475 aaKnown RBP eCLIP8.25□□□□□ -1.09
LINC00390-201ENST00000432331 EIF4A2Q14240 407 aaKnown RBP8.25□□□□□ -1.09
LINC00390-201ENST00000432331 HSP90AB2PQ58FF8 381 aa8.25□□□□□ -1.09
LINC00390-201ENST00000432331 TRMT2AQ8IZ69 625 aaKnown RBP8.25□□□□□ -1.09
LINC00390-201ENST00000432331 CDCA7LQ96GN5 454 aa8.25□□□□□ -1.09
LINC00390-201ENST00000432331 RWDD1Q9H446 243 aaPredicted RBP8.25□□□□□ -1.09
LINC00390-201ENST00000432331 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.25□□□□□ -1.09
LINC00390-201ENST00000432331 ERBB3P21860 1342 aa8.25□□□□□ -1.09
LINC00390-201ENST00000432331 LMO7Q8WWI1 1683 aa8.24□□□□□ -1.09
LINC00390-201ENST00000432331 U2AF1L5P0DN76 240 aaPredicted RBP8.24□□□□□ -1.09
LINC00390-201ENST00000432331 CYP2C19P33261 490 aa8.24□□□□□ -1.09
LINC00390-201ENST00000432331 IL13P35225 146 aa8.24□□□□□ -1.09
LINC00390-201ENST00000432331 NOP2P46087 812 aaKnown RBP8.24□□□□□ -1.09
LINC00390-201ENST00000432331 U2AF1Q01081 240 aaKnown RBP eCLIP8.24□□□□□ -1.09
LINC00390-201ENST00000432331 NOM1Q5C9Z4 860 aaKnown RBP8.24□□□□□ -1.09
LINC00390-201ENST00000432331 BANK1Q8NDB2 785 aa8.24□□□□□ -1.09
LINC00390-201ENST00000432331 TACO1Q9BSH4 297 aaKnown RBP8.24□□□□□ -1.09
LINC00390-201ENST00000432331 RBSNQ9H1K0 784 aa8.24□□□□□ -1.09
LINC00390-201ENST00000432331 FAM53CQ9NYF3 392 aa8.24□□□□□ -1.09
LINC00390-201ENST00000432331 COL14A1Q05707 1796 aaKnown RBP8.24□□□□□ -1.09
LINC00390-201ENST00000432331 COL5A2P05997 1499 aaPredicted RBP8.24□□□□□ -1.09
LINC00390-201ENST00000432331 SPDYE4A6NLX3 237 aa8.23□□□□□ -1.09
LINC00390-201ENST00000432331 SMTNL1A8MU46 457 aa8.23□□□□□ -1.09
LINC00390-201ENST00000432331 K7ELQ4 463 aaPredicted RBP8.23□□□□□ -1.09
LINC00390-201ENST00000432331 SETQ01105 290 aaPredicted RBP8.23□□□□□ -1.09
LINC00390-201ENST00000432331 TRDNQ13061 729 aa8.23□□□□□ -1.09
LINC00390-201ENST00000432331 RABEP1Q15276 862 aa8.23□□□□□ -1.09
LINC00390-201ENST00000432331 CHRNA2Q15822 529 aa8.23□□□□□ -1.09
LINC00390-201ENST00000432331 TEX35Q5T0J7 233 aa8.23□□□□□ -1.09
LINC00390-201ENST00000432331 AEBP1Q8IUX7 1158 aa8.23□□□□□ -1.09
LINC00390-201ENST00000432331 EGFL6Q8IUX8 553 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms