RNA–Protein interactions for RNA: ENST00000431715.5

ATG9A-209, Transcript of autophagy related 9A, humanhuman

TSL 3

Gene ATG9A, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-209ENST00000431715 ZBTB1Q9Y2K1 713 aa23.31■■□□□ 1.32
ATG9A-209ENST00000431715 KDM3BQ7LBC6 1761 aa23.31■■□□□ 1.32
ATG9A-209ENST00000431715 STARD3NLO95772 234 aa23.3■■□□□ 1.32
ATG9A-209ENST00000431715 KLHL34Q8N239 644 aa23.3■■□□□ 1.32
ATG9A-209ENST00000431715 SYT17Q9BSW7 474 aa23.3■■□□□ 1.32
ATG9A-209ENST00000431715 TEX13AQ9BXU3 409 aaPredicted RBP23.3■■□□□ 1.32
ATG9A-209ENST00000431715 CANXP27824 592 aaKnown RBP23.29■■□□□ 1.32
ATG9A-209ENST00000431715 PNISRQ8TF01 805 aaKnown RBP23.29■■□□□ 1.32
ATG9A-209ENST00000431715 SOS1Q07889 1333 aaPredicted RBP23.29■■□□□ 1.32
ATG9A-209ENST00000431715 LMOD3Q0VAK6 560 aa23.28■■□□□ 1.32
ATG9A-209ENST00000431715 PRAMEF22A3QJZ6 481 aa23.27■■□□□ 1.32
ATG9A-209ENST00000431715 MRS2Q9HD23 443 aa23.27■■□□□ 1.32
ATG9A-209ENST00000431715 SRP68Q9UHB9 627 aaKnown RBP23.27■■□□□ 1.32
ATG9A-209ENST00000431715 USP16Q9Y5T5 823 aa23.27■■□□□ 1.32
ATG9A-209ENST00000431715 SNRPA1P09661 255 aaKnown RBP23.26■■□□□ 1.31
ATG9A-209ENST00000431715 GYS1P13807 737 aa23.26■■□□□ 1.31
ATG9A-209ENST00000431715 TRIM35Q9UPQ4 493 aa23.26■■□□□ 1.31
ATG9A-209ENST00000431715 A1BGP04217 495 aa23.25■■□□□ 1.31
ATG9A-209ENST00000431715 NLGN1Q8N2Q7 840 aa23.25■■□□□ 1.31
ATG9A-209ENST00000431715 APAF1O14727 1248 aa23.24■■□□□ 1.31
ATG9A-209ENST00000431715 USP42Q9H9J4 1324 aaKnown RBP23.24■■□□□ 1.31
ATG9A-209ENST00000431715 COL15A1P39059 1388 aa23.24■■□□□ 1.31
ATG9A-209ENST00000431715 MMP10P09238 476 aa23.22■■□□□ 1.31
ATG9A-209ENST00000431715 EIF5P55010 431 aaKnown RBP23.22■■□□□ 1.31
ATG9A-209ENST00000431715 EIF4A1P60842 406 aaKnown RBP23.22■■□□□ 1.31
ATG9A-209ENST00000431715 TSPYL4Q9UJ04 414 aa23.22■■□□□ 1.31
ATG9A-209ENST00000431715 ZPR1O75312 459 aa23.21■■□□□ 1.31
ATG9A-209ENST00000431715 FKBP8Q14318 412 aa23.21■■□□□ 1.31
ATG9A-209ENST00000431715 USPL1Q5W0Q7 1092 aa23.21■■□□□ 1.31
ATG9A-209ENST00000431715 ZNF330Q9Y3S2 320 aaPredicted RBP23.21■■□□□ 1.31
ATG9A-209ENST00000431715 PIP4K2AP48426 406 aaPredicted RBP23.2■■□□□ 1.3
ATG9A-209ENST00000431715 NLGN2Q8NFZ4 835 aa23.2■■□□□ 1.3
ATG9A-209ENST00000431715 NARFQ9UHQ1 456 aa23.2■■□□□ 1.3
ATG9A-209ENST00000431715 LAMB4A4D0S4 1761 aa23.19■■□□□ 1.3
ATG9A-209ENST00000431715 IL6STP40189 918 aaPredicted RBP23.19■■□□□ 1.3
ATG9A-209ENST00000431715 A0A087WZG4 1122 aa23.18■■□□□ 1.3
ATG9A-209ENST00000431715 GIGYF1O75420 1035 aaPredicted RBP23.18■■□□□ 1.3
ATG9A-209ENST00000431715 BABAM1Q9NWV8 329 aa23.18■■□□□ 1.3
ATG9A-209ENST00000431715 LAS1LQ9Y4W2 734 aaKnown RBP23.18■■□□□ 1.3
ATG9A-209ENST00000431715 BCL2L12Q9HB09 334 aa23.17■■□□□ 1.3
ATG9A-209ENST00000431715 CD2APQ9Y5K6 639 aa23.17■■□□□ 1.3
ATG9A-209ENST00000431715 SENP3-EIF4A1A0A087X0R7 540 aa23.16■■□□□ 1.3
ATG9A-209ENST00000431715 DCAF8L1A6NGE4 600 aa23.16■■□□□ 1.3
ATG9A-209ENST00000431715 TBC1D2BQ9UPU7 963 aa23.16■■□□□ 1.3
ATG9A-209ENST00000431715 PARP3Q9Y6F1 533 aa23.16■■□□□ 1.3
ATG9A-209ENST00000431715 NBPF26B4DH59 902 aa23.15■■□□□ 1.3
ATG9A-209ENST00000431715 NBPF10Q6P3W6 841 aaKnown RBP23.15■■□□□ 1.3
ATG9A-209ENST00000431715 NPM2Q86SE8 214 aaKnown RBP23.15■■□□□ 1.3
ATG9A-209ENST00000431715 NBPF15Q8N660 670 aa23.15■■□□□ 1.3
ATG9A-209ENST00000431715 CHL1O00533 1208 aa23.14■■□□□ 1.29
ATG9A-209ENST00000431715 TM4SF1P30408 202 aa23.14■■□□□ 1.29
ATG9A-209ENST00000431715 DDR1Q08345 913 aa23.13■■□□□ 1.29
ATG9A-209ENST00000431715 KIF13BQ9NQT8 1826 aa23.12■■□□□ 1.29
ATG9A-209ENST00000431715 AFDNP55196 1824 aaKnown RBP23.12■■□□□ 1.29
ATG9A-209ENST00000431715 NFIXQ14938 502 aa23.11■■□□□ 1.29
ATG9A-209ENST00000431715 DZIP3Q86Y13 1208 aaKnown RBP23.11■■□□□ 1.29
ATG9A-209ENST00000431715 FAM9BQ8IZU0 186 aa23.11■■□□□ 1.29
ATG9A-209ENST00000431715 SCN7AQ01118 1682 aa23.11■■□□□ 1.29
ATG9A-209ENST00000431715 BCORQ6W2J9 1755 aa23.1■■□□□ 1.29
ATG9A-209ENST00000431715 POLRMTO00411 1230 aaKnown RBP23.1■■□□□ 1.29
ATG9A-209ENST00000431715 PELP1Q8IZL8 1130 aaKnown RBP23.1■■□□□ 1.29
ATG9A-209ENST00000431715 CFAP44Q96MT7 982 aa23.1■■□□□ 1.29
ATG9A-209ENST00000431715 CAMTA2O94983 1202 aa23.09■■□□□ 1.29
ATG9A-209ENST00000431715 GPR162Q16538 588 aa23.09■■□□□ 1.29
ATG9A-209ENST00000431715 KRT24Q2M2I5 525 aa23.09■■□□□ 1.29
ATG9A-209ENST00000431715 BICDL1Q6ZP65 573 aa23.09■■□□□ 1.29
ATG9A-209ENST00000431715 N4BP2Q86UW6 1770 aaPredicted RBP23.09■■□□□ 1.29
ATG9A-209ENST00000431715 EIF2S2P20042 333 aaKnown RBP23.08■■□□□ 1.29
ATG9A-209ENST00000431715 NGEFQ8N5V2 710 aa23.08■■□□□ 1.29
ATG9A-209ENST00000431715 C10orf71Q711Q0 1435 aa23.08■■□□□ 1.28
ATG9A-209ENST00000431715 ZNF853P0CG23 659 aa23.07■■□□□ 1.28
ATG9A-209ENST00000431715 TBC1D9BQ66K14 1250 aa23.07■■□□□ 1.28
ATG9A-209ENST00000431715 MBIPQ9NS73 344 aa23.07■■□□□ 1.28
ATG9A-209ENST00000431715 KIAA1551Q9HCM1 1747 aa23.06■■□□□ 1.28
ATG9A-209ENST00000431715 MYL6BP14649 208 aa23.06■■□□□ 1.28
ATG9A-209ENST00000431715 CALD1Q05682 793 aaKnown RBP23.06■■□□□ 1.28
ATG9A-209ENST00000431715 IFT57Q9NWB7 429 aa23.06■■□□□ 1.28
ATG9A-209ENST00000431715 SERPINB2P05120 415 aa23.05■■□□□ 1.28
ATG9A-209ENST00000431715 GNAI1P63096 354 aa23.05■■□□□ 1.28
ATG9A-209ENST00000431715 NRXN2Q9P2S2 1712 aa23.05■■□□□ 1.28
ATG9A-209ENST00000431715 CCDC27Q2M243 656 aa23.04■■□□□ 1.28
ATG9A-209ENST00000431715 NECTIN2Q92692 538 aa23.04■■□□□ 1.28
ATG9A-209ENST00000431715 WWC3Q9ULE0 1092 aa23.04■■□□□ 1.28
ATG9A-209ENST00000431715 SALL2Q9Y467 1007 aaPredicted RBP23.04■■□□□ 1.28
ATG9A-209ENST00000431715 TGFB2P61812 414 aa23.03■■□□□ 1.28
ATG9A-209ENST00000431715 WWC1Q8IX03 1113 aa23.03■■□□□ 1.28
ATG9A-209ENST00000431715 ERBB4Q15303 1308 aa23.03■■□□□ 1.28
ATG9A-209ENST00000431715 NUP98P52948 1817 aa23.03■■□□□ 1.28
ATG9A-209ENST00000431715 A0A0G2JLW4 131 aa23.02■■□□□ 1.28
ATG9A-209ENST00000431715 YBX3P16989 372 aaKnown RBP eCLIP23.02■■□□□ 1.28
ATG9A-209ENST00000431715 PXDNLA1KZ92 1463 aa23.02■■□□□ 1.28
ATG9A-209ENST00000431715 CHD4Q14839 1912 aa23.02■■□□□ 1.28
ATG9A-209ENST00000431715 ANXA1P04083 346 aa23.01■■□□□ 1.27
ATG9A-209ENST00000431715 PDIA6Q15084 440 aa23.01■■□□□ 1.27
ATG9A-209ENST00000431715 CLEC4GQ6UXB4 293 aa23.01■■□□□ 1.27
ATG9A-209ENST00000431715 TTLL7Q6ZT98 887 aa23.01■■□□□ 1.27
ATG9A-209ENST00000431715 DPEP1P16444 411 aa23■■□□□ 1.27
ATG9A-209ENST00000431715 HLFQ16534 295 aa23■■□□□ 1.27
ATG9A-209ENST00000431715 PROSER3Q2NL68 480 aa23■■□□□ 1.27
ATG9A-209ENST00000431715 NCBP3Q53F19 620 aaKnown RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms