RNA–Protein interactions for RNA: ENST00000431373.1

DDR1-236, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 886 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-236ENST00000431373 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.28■■□□□ 1.48
DDR1-236ENST00000431373 EIF4A1P60842 406 aaKnown RBP24.28■■□□□ 1.48
DDR1-236ENST00000431373 INTS5Q6P9B9 1019 aaKnown RBP24.28■■□□□ 1.48
DDR1-236ENST00000431373 SMIM5Q71RC9 77 aa24.28■■□□□ 1.48
DDR1-236ENST00000431373 SLC16A10Q8TF71 515 aa24.28■■□□□ 1.48
DDR1-236ENST00000431373 CHL1O00533 1208 aa24.27■■□□□ 1.48
DDR1-236ENST00000431373 ZBTB7AO95365 584 aa24.27■■□□□ 1.48
DDR1-236ENST00000431373 WWC1Q8IX03 1113 aa24.26■■□□□ 1.47
DDR1-236ENST00000431373 CFAP44Q96MT7 982 aa24.26■■□□□ 1.47
DDR1-236ENST00000431373 MTFR1LQ9H019 292 aa24.26■■□□□ 1.47
DDR1-236ENST00000431373 COL24A1Q17RW2 1714 aa24.26■■□□□ 1.47
DDR1-236ENST00000431373 PRAMEF22A3QJZ6 481 aa24.25■■□□□ 1.47
DDR1-236ENST00000431373 ADRA2BP18089 450 aa24.25■■□□□ 1.47
DDR1-236ENST00000431373 NGEFQ8N5V2 710 aa24.25■■□□□ 1.47
DDR1-236ENST00000431373 SPON1Q9HCB6 807 aa24.25■■□□□ 1.47
DDR1-236ENST00000431373 TRAPPC3LQ5T215 181 aa24.24■■□□□ 1.47
DDR1-236ENST00000431373 IFT57Q9NWB7 429 aa24.24■■□□□ 1.47
DDR1-236ENST00000431373 ZBTB1Q9Y2K1 713 aa24.24■■□□□ 1.47
DDR1-236ENST00000431373 SALL2Q9Y467 1007 aaPredicted RBP24.24■■□□□ 1.47
DDR1-236ENST00000431373 USP16Q9Y5T5 823 aa24.24■■□□□ 1.47
DDR1-236ENST00000431373 GIGYF1O75420 1035 aaPredicted RBP24.23■■□□□ 1.47
DDR1-236ENST00000431373 ZNF853P0CG23 659 aa24.23■■□□□ 1.47
DDR1-236ENST00000431373 GNAI1P63096 354 aa24.23■■□□□ 1.47
DDR1-236ENST00000431373 ATF5Q9Y2D1 282 aaPredicted RBP24.23■■□□□ 1.47
DDR1-236ENST00000431373 SOS1Q07889 1333 aaPredicted RBP24.22■■□□□ 1.47
DDR1-236ENST00000431373 ARHGEF1Q92888 912 aaKnown RBP24.22■■□□□ 1.47
DDR1-236ENST00000431373 CANXP27824 592 aaKnown RBP24.21■■□□□ 1.47
DDR1-236ENST00000431373 IL16Q14005 1332 aa24.2■■□□□ 1.46
DDR1-236ENST00000431373 A1BGP04217 495 aa24.2■■□□□ 1.46
DDR1-236ENST00000431373 MBIPQ9NS73 344 aa24.2■■□□□ 1.46
DDR1-236ENST00000431373 COL15A1P39059 1388 aa24.19■■□□□ 1.46
DDR1-236ENST00000431373 RFC4P35249 363 aa24.19■■□□□ 1.46
DDR1-236ENST00000431373 WDR63Q8IWG1 891 aa24.18■■□□□ 1.46
DDR1-236ENST00000431373 PTGER2P43116 358 aa24.17■■□□□ 1.46
DDR1-236ENST00000431373 EIF5P55010 431 aaKnown RBP24.17■■□□□ 1.46
DDR1-236ENST00000431373 IL6STP40189 918 aaPredicted RBP24.16■■□□□ 1.46
DDR1-236ENST00000431373 MSL1Q68DK7 614 aa24.16■■□□□ 1.46
DDR1-236ENST00000431373 KRT24Q2M2I5 525 aa24.15■■□□□ 1.46
DDR1-236ENST00000431373 SGIP1Q9BQI5 828 aa24.15■■□□□ 1.46
DDR1-236ENST00000431373 USP42Q9H9J4 1324 aaKnown RBP24.14■■□□□ 1.46
DDR1-236ENST00000431373 POLD1P28340 1107 aa24.14■■□□□ 1.45
DDR1-236ENST00000431373 PIP4K2AP48426 406 aaPredicted RBP24.14■■□□□ 1.45
DDR1-236ENST00000431373 NPM2Q86SE8 214 aaKnown RBP24.14■■□□□ 1.45
DDR1-236ENST00000431373 ZNF330Q9Y3S2 320 aaPredicted RBP24.14■■□□□ 1.45
DDR1-236ENST00000431373 A0A087WZG4 1122 aa24.13■■□□□ 1.45
DDR1-236ENST00000431373 SRP68Q9UHB9 627 aaKnown RBP24.13■■□□□ 1.45
DDR1-236ENST00000431373 SCN7AQ01118 1682 aa24.13■■□□□ 1.45
DDR1-236ENST00000431373 NBPF26B4DH59 902 aa24.12■■□□□ 1.45
DDR1-236ENST00000431373 ZPR1O75312 459 aa24.12■■□□□ 1.45
DDR1-236ENST00000431373 HOXB7P09629 217 aa24.12■■□□□ 1.45
DDR1-236ENST00000431373 GYS1P13807 737 aa24.12■■□□□ 1.45
DDR1-236ENST00000431373 NBPF10Q6P3W6 841 aaKnown RBP24.12■■□□□ 1.45
DDR1-236ENST00000431373 NBPF15Q8N660 670 aa24.12■■□□□ 1.45
DDR1-236ENST00000431373 TSR2Q969E8 191 aaKnown RBP24.12■■□□□ 1.45
DDR1-236ENST00000431373 PPP1R1BQ9UD71 204 aaPredicted RBP24.12■■□□□ 1.45
DDR1-236ENST00000431373 ERBB4Q15303 1308 aa24.11■■□□□ 1.45
DDR1-236ENST00000431373 ZNF521Q96K83 1311 aa24.11■■□□□ 1.45
DDR1-236ENST00000431373 BCORQ6W2J9 1755 aa24.11■■□□□ 1.45
DDR1-236ENST00000431373 EIF2S2P20042 333 aaKnown RBP24.11■■□□□ 1.45
DDR1-236ENST00000431373 NARFQ9UHQ1 456 aa24.11■■□□□ 1.45
DDR1-236ENST00000431373 DUSP27Q5VZP5 1158 aa24.1■■□□□ 1.45
DDR1-236ENST00000431373 NLGN1Q8N2Q7 840 aa24.1■■□□□ 1.45
DDR1-236ENST00000431373 USPL1Q5W0Q7 1092 aa24.09■■□□□ 1.45
DDR1-236ENST00000431373 ARXQ96QS3 562 aa24.09■■□□□ 1.45
DDR1-236ENST00000431373 FANCIQ9NVI1 1328 aa24.08■■□□□ 1.44
DDR1-236ENST00000431373 SRCAPQ6ZRS2 3230 aa24.07■■□□□ 1.44
DDR1-236ENST00000431373 HDGFL1Q5TGJ6 251 aa24.07■■□□□ 1.44
DDR1-236ENST00000431373 DZIP3Q86Y13 1208 aaKnown RBP24.07■■□□□ 1.44
DDR1-236ENST00000431373 C8orf58Q8NAV2 365 aa24.07■■□□□ 1.44
DDR1-236ENST00000431373 NECTIN2Q92692 538 aa24.07■■□□□ 1.44
DDR1-236ENST00000431373 TBC1D2BQ9UPU7 963 aa24.07■■□□□ 1.44
DDR1-236ENST00000431373 ELL2O00472 640 aaPredicted RBP24.06■■□□□ 1.44
DDR1-236ENST00000431373 MYL6BP14649 208 aa24.06■■□□□ 1.44
DDR1-236ENST00000431373 FKBP8Q14318 412 aa24.06■■□□□ 1.44
DDR1-236ENST00000431373 SPINK5Q9NQ38 1064 aaPredicted RBP24.06■■□□□ 1.44
DDR1-236ENST00000431373 MYH16Q9H6N6 1097 aa24.05■■□□□ 1.44
DDR1-236ENST00000431373 MMP10P09238 476 aa24.04■■□□□ 1.44
DDR1-236ENST00000431373 GOLGA2Q08379 1002 aa24.04■■□□□ 1.44
DDR1-236ENST00000431373 PDIA6Q15084 440 aa24.04■■□□□ 1.44
DDR1-236ENST00000431373 BCL2L12Q9HB09 334 aa24.04■■□□□ 1.44
DDR1-236ENST00000431373 CAMTA2O94983 1202 aa24.03■■□□□ 1.44
DDR1-236ENST00000431373 TSPYL6Q8N831 410 aa24.03■■□□□ 1.44
DDR1-236ENST00000431373 DDX21Q9NR30 783 aaKnown RBP eCLIP24.03■■□□□ 1.44
DDR1-236ENST00000431373 NUP98P52948 1817 aa24.03■■□□□ 1.44
DDR1-236ENST00000431373 PROSER3Q2NL68 480 aa24.02■■□□□ 1.44
DDR1-236ENST00000431373 CHMP4AQ9BY43 222 aa24.02■■□□□ 1.44
DDR1-236ENST00000431373 CHPF2Q9P2E5 772 aa24.02■■□□□ 1.44
DDR1-236ENST00000431373 ANXA1P04083 346 aa24.01■■□□□ 1.43
DDR1-236ENST00000431373 TWISTNBQ3B726 338 aaPredicted RBP24.01■■□□□ 1.43
DDR1-236ENST00000431373 LRP10Q7Z4F1 713 aa24.01■■□□□ 1.43
DDR1-236ENST00000431373 DBF4Q9UBU7 674 aaPredicted RBP24.01■■□□□ 1.43
DDR1-236ENST00000431373 PARP3Q9Y6F1 533 aa24.01■■□□□ 1.43
DDR1-236ENST00000431373 AFDNP55196 1824 aaKnown RBP24■■□□□ 1.43
DDR1-236ENST00000431373 E9PSI1 815 aa23.99■■□□□ 1.43
DDR1-236ENST00000431373 TM4SF1P30408 202 aa23.99■■□□□ 1.43
DDR1-236ENST00000431373 EXOSC9Q06265 439 aaKnown RBP23.99■■□□□ 1.43
DDR1-236ENST00000431373 KIF6Q6ZMV9 814 aa23.99■■□□□ 1.43
DDR1-236ENST00000431373 TTLL7Q6ZT98 887 aa23.99■■□□□ 1.43
DDR1-236ENST00000431373 FHDC1Q9C0D6 1143 aaPredicted RBP23.99■■□□□ 1.43
DDR1-236ENST00000431373 ZNF652Q9Y2D9 606 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms