RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 SMIM5Q71RC9 77 aa22.81■■□□□ 1.24
CTDSP1-203ENST00000431127 SNRPA1P09661 255 aaKnown RBP22.8■■□□□ 1.24
CTDSP1-203ENST00000431127 RFC4P35249 363 aa22.8■■□□□ 1.24
CTDSP1-203ENST00000431127 ARHGEF1Q92888 912 aaKnown RBP22.8■■□□□ 1.24
CTDSP1-203ENST00000431127 BABAM1Q9NWV8 329 aa22.8■■□□□ 1.24
CTDSP1-203ENST00000431127 MIS18AQ9NYP9 233 aa22.79■■□□□ 1.24
CTDSP1-203ENST00000431127 APAF1O14727 1248 aa22.78■■□□□ 1.24
CTDSP1-203ENST00000431127 MSL1Q68DK7 614 aa22.78■■□□□ 1.24
CTDSP1-203ENST00000431127 MYH14Q7Z406 1995 aaKnown RBP22.78■■□□□ 1.24
CTDSP1-203ENST00000431127 TRIM35Q9UPQ4 493 aa22.77■■□□□ 1.24
CTDSP1-203ENST00000431127 TSPYL4Q9UJ04 414 aa22.76■■□□□ 1.23
CTDSP1-203ENST00000431127 ZBTB1Q9Y2K1 713 aa22.76■■□□□ 1.23
CTDSP1-203ENST00000431127 SOS1Q07889 1333 aaPredicted RBP22.76■■□□□ 1.23
CTDSP1-203ENST00000431127 UTRNP46939 3433 aa22.75■■□□□ 1.23
CTDSP1-203ENST00000431127 COL24A1Q17RW2 1714 aa22.75■■□□□ 1.23
CTDSP1-203ENST00000431127 NLGN1Q8N2Q7 840 aa22.75■■□□□ 1.23
CTDSP1-203ENST00000431127 CANXP27824 592 aaKnown RBP22.74■■□□□ 1.23
CTDSP1-203ENST00000431127 EIF4A1P60842 406 aaKnown RBP22.73■■□□□ 1.23
CTDSP1-203ENST00000431127 CALD1Q05682 793 aaKnown RBP22.73■■□□□ 1.23
CTDSP1-203ENST00000431127 USP16Q9Y5T5 823 aa22.73■■□□□ 1.23
CTDSP1-203ENST00000431127 A0A087WZG4 1122 aa22.72■■□□□ 1.23
CTDSP1-203ENST00000431127 ZPR1O75312 459 aa22.72■■□□□ 1.23
CTDSP1-203ENST00000431127 NPM2Q86SE8 214 aaKnown RBP22.72■■□□□ 1.23
CTDSP1-203ENST00000431127 USP42Q9H9J4 1324 aaKnown RBP22.72■■□□□ 1.23
CTDSP1-203ENST00000431127 GIGYF1O75420 1035 aaPredicted RBP22.71■■□□□ 1.23
CTDSP1-203ENST00000431127 GYS1P13807 737 aa22.71■■□□□ 1.23
CTDSP1-203ENST00000431127 IL6STP40189 918 aaPredicted RBP22.71■■□□□ 1.23
CTDSP1-203ENST00000431127 EIF5P55010 431 aaKnown RBP22.71■■□□□ 1.23
CTDSP1-203ENST00000431127 COL15A1P39059 1388 aa22.71■■□□□ 1.23
CTDSP1-203ENST00000431127 CHL1O00533 1208 aa22.7■■□□□ 1.22
CTDSP1-203ENST00000431127 A1BGP04217 495 aa22.7■■□□□ 1.22
CTDSP1-203ENST00000431127 KDM3BQ7LBC6 1761 aa22.7■■□□□ 1.22
CTDSP1-203ENST00000431127 PRAMEF22A3QJZ6 481 aa22.69■■□□□ 1.22
CTDSP1-203ENST00000431127 NCBP3Q53F19 620 aaKnown RBP22.69■■□□□ 1.22
CTDSP1-203ENST00000431127 NARFQ9UHQ1 456 aa22.69■■□□□ 1.22
CTDSP1-203ENST00000431127 LAS1LQ9Y4W2 734 aaKnown RBP22.69■■□□□ 1.22
CTDSP1-203ENST00000431127 GPR162Q16538 588 aa22.68■■□□□ 1.22
CTDSP1-203ENST00000431127 KLHL34Q8N239 644 aa22.68■■□□□ 1.22
CTDSP1-203ENST00000431127 CFAP44Q96MT7 982 aa22.68■■□□□ 1.22
CTDSP1-203ENST00000431127 SRP68Q9UHB9 627 aaKnown RBP22.68■■□□□ 1.22
CTDSP1-203ENST00000431127 MMP10P09238 476 aa22.67■■□□□ 1.22
CTDSP1-203ENST00000431127 CCDC27Q2M243 656 aa22.67■■□□□ 1.22
CTDSP1-203ENST00000431127 FAM9BQ8IZU0 186 aa22.67■■□□□ 1.22
CTDSP1-203ENST00000431127 ZNF330Q9Y3S2 320 aaPredicted RBP22.67■■□□□ 1.22
CTDSP1-203ENST00000431127 USPL1Q5W0Q7 1092 aa22.66■■□□□ 1.22
CTDSP1-203ENST00000431127 ZNF784Q8NCA9 323 aaPredicted RBP22.66■■□□□ 1.22
CTDSP1-203ENST00000431127 C4AP0C0L4 1744 aa22.65■■□□□ 1.22
CTDSP1-203ENST00000431127 IFT57Q9NWB7 429 aa22.65■■□□□ 1.22
CTDSP1-203ENST00000431127 CD2APQ9Y5K6 639 aa22.65■■□□□ 1.22
CTDSP1-203ENST00000431127 GNAI1P63096 354 aa22.64■■□□□ 1.21
CTDSP1-203ENST00000431127 FKBP8Q14318 412 aa22.64■■□□□ 1.21
CTDSP1-203ENST00000431127 CCER2I3L3R5 266 aa22.63■■□□□ 1.21
CTDSP1-203ENST00000431127 PARP3Q9Y6F1 533 aa22.63■■□□□ 1.21
CTDSP1-203ENST00000431127 ZNF853P0CG23 659 aa22.62■■□□□ 1.21
CTDSP1-203ENST00000431127 NGEFQ8N5V2 710 aa22.62■■□□□ 1.21
CTDSP1-203ENST00000431127 NLGN2Q8NFZ4 835 aa22.62■■□□□ 1.21
CTDSP1-203ENST00000431127 ERBB4Q15303 1308 aa22.61■■□□□ 1.21
CTDSP1-203ENST00000431127 NBPF26B4DH59 902 aa22.61■■□□□ 1.21
CTDSP1-203ENST00000431127 PIP4K2AP48426 406 aaPredicted RBP22.61■■□□□ 1.21
CTDSP1-203ENST00000431127 DIEXFQ68CQ4 756 aaKnown RBP22.61■■□□□ 1.21
CTDSP1-203ENST00000431127 NBPF10Q6P3W6 841 aaKnown RBP22.61■■□□□ 1.21
CTDSP1-203ENST00000431127 DZIP3Q86Y13 1208 aaKnown RBP22.61■■□□□ 1.21
CTDSP1-203ENST00000431127 WWC1Q8IX03 1113 aa22.61■■□□□ 1.21
CTDSP1-203ENST00000431127 NBPF15Q8N660 670 aa22.61■■□□□ 1.21
CTDSP1-203ENST00000431127 TBC1D2BQ9UPU7 963 aa22.61■■□□□ 1.21
CTDSP1-203ENST00000431127 TM4SF1P30408 202 aa22.6■■□□□ 1.21
CTDSP1-203ENST00000431127 MBIPQ9NS73 344 aa22.6■■□□□ 1.21
CTDSP1-203ENST00000431127 LAMB4A4D0S4 1761 aa22.6■■□□□ 1.21
CTDSP1-203ENST00000431127 HOXB7P09629 217 aa22.59■■□□□ 1.21
CTDSP1-203ENST00000431127 PELP1Q8IZL8 1130 aaKnown RBP22.59■■□□□ 1.21
CTDSP1-203ENST00000431127 BCL2L12Q9HB09 334 aa22.59■■□□□ 1.21
CTDSP1-203ENST00000431127 CHD4Q14839 1912 aa22.59■■□□□ 1.21
CTDSP1-203ENST00000431127 RGL2O15211 777 aa22.57■■□□□ 1.2
CTDSP1-203ENST00000431127 CAMTA2O94983 1202 aa22.57■■□□□ 1.2
CTDSP1-203ENST00000431127 EIF2S2P20042 333 aaKnown RBP22.57■■□□□ 1.2
CTDSP1-203ENST00000431127 NFIXQ14938 502 aa22.57■■□□□ 1.2
CTDSP1-203ENST00000431127 IL16Q14005 1332 aa22.57■■□□□ 1.2
CTDSP1-203ENST00000431127 SENP3-EIF4A1A0A087X0R7 540 aa22.56■■□□□ 1.2
CTDSP1-203ENST00000431127 POLRMTO00411 1230 aaKnown RBP22.56■■□□□ 1.2
CTDSP1-203ENST00000431127 DDR1Q08345 913 aa22.56■■□□□ 1.2
CTDSP1-203ENST00000431127 CLEC4GQ6UXB4 293 aa22.56■■□□□ 1.2
CTDSP1-203ENST00000431127 ZNF652Q9Y2D9 606 aa22.56■■□□□ 1.2
CTDSP1-203ENST00000431127 KRT24Q2M2I5 525 aa22.55■■□□□ 1.2
CTDSP1-203ENST00000431127 WDR63Q8IWG1 891 aa22.55■■□□□ 1.2
CTDSP1-203ENST00000431127 GRIN3BO60391 1043 aa22.54■■□□□ 1.2
CTDSP1-203ENST00000431127 MYL6BP14649 208 aa22.54■■□□□ 1.2
CTDSP1-203ENST00000431127 DUSP27Q5VZP5 1158 aa22.54■■□□□ 1.2
CTDSP1-203ENST00000431127 YBX3P16989 372 aaKnown RBP eCLIP22.53■■□□□ 1.21e-6■□□□□ 10.2
CTDSP1-203ENST00000431127 CHMP4AQ9BY43 222 aa22.53■■□□□ 1.2
CTDSP1-203ENST00000431127 SALL2Q9Y467 1007 aaPredicted RBP22.53■■□□□ 1.2
CTDSP1-203ENST00000431127 GOLGB1Q14789 3259 aaKnown RBP22.53■■□□□ 1.2
CTDSP1-203ENST00000431127 C10orf71Q711Q0 1435 aa22.52■■□□□ 1.2
CTDSP1-203ENST00000431127 TGFB2P61812 414 aa22.52■■□□□ 1.2
CTDSP1-203ENST00000431127 HDGFL1Q5TGJ6 251 aa22.52■■□□□ 1.2
CTDSP1-203ENST00000431127 TBC1D9BQ66K14 1250 aa22.52■■□□□ 1.2
CTDSP1-203ENST00000431127 KIF6Q6ZMV9 814 aa22.52■■□□□ 1.2
CTDSP1-203ENST00000431127 BICDL1Q6ZP65 573 aa22.52■■□□□ 1.2
CTDSP1-203ENST00000431127 SETDB2Q96T68 719 aa22.52■■□□□ 1.2
CTDSP1-203ENST00000431127 SCN7AQ01118 1682 aa22.52■■□□□ 1.2
CTDSP1-203ENST00000431127 ERVV-1B6SEH8 477 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms