RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 DDX11Q96FC9 970 aa5.32□□□□□ -1.56
LRRK2-204ENST00000430804 LUC7LQ9NQ29 371 aaKnown RBP5.32□□□□□ -1.56
LRRK2-204ENST00000430804 KCNH4Q9UQ05 1017 aa5.32□□□□□ -1.56
LRRK2-204ENST00000430804 PCDH11XQ9BZA7 1347 aa5.32□□□□□ -1.56
LRRK2-204ENST00000430804 PCDH11YQ9BZA8 1340 aa5.32□□□□□ -1.56
LRRK2-204ENST00000430804 ECM2O94769 699 aaPredicted RBP5.31□□□□□ -1.56
LRRK2-204ENST00000430804 OSBPP22059 807 aa5.31□□□□□ -1.56
LRRK2-204ENST00000430804 CCT4P50991 539 aaKnown RBP5.31□□□□□ -1.56
LRRK2-204ENST00000430804 IQCA1Q86XH1 822 aa5.31□□□□□ -1.56
LRRK2-204ENST00000430804 NUTM1Q86Y26 1132 aa5.31□□□□□ -1.56
LRRK2-204ENST00000430804 CRNKL1Q9BZJ0 848 aaKnown RBP5.31□□□□□ -1.56
LRRK2-204ENST00000430804 PNMA2Q9UL42 364 aa5.31□□□□□ -1.56
LRRK2-204ENST00000430804 CIZ1Q9ULV3 898 aaPredicted RBP5.31□□□□□ -1.56
LRRK2-204ENST00000430804 ASXL2Q76L83 1435 aa5.31□□□□□ -1.56
LRRK2-204ENST00000430804 IGF1RP08069 1367 aa5.31□□□□□ -1.56
LRRK2-204ENST00000430804 KIF20AO95235 890 aa5.31□□□□□ -1.56
LRRK2-204ENST00000430804 CFAP70Q5T0N1 1121 aa5.31□□□□□ -1.56
LRRK2-204ENST00000430804 RSPH6AQ9H0K4 717 aa5.31□□□□□ -1.56
LRRK2-204ENST00000430804 HYPKQ9NX55 129 aa5.31□□□□□ -1.56
LRRK2-204ENST00000430804 NSFL1CQ9UNZ2 370 aaKnown RBP5.31□□□□□ -1.56
LRRK2-204ENST00000430804 NR2E3Q9Y5X4 410 aa5.31□□□□□ -1.56
LRRK2-204ENST00000430804 SURF6O75683 361 aaKnown RBP5.31□□□□□ -1.56
LRRK2-204ENST00000430804 NUCB2P80303 420 aa5.31□□□□□ -1.56
LRRK2-204ENST00000430804 FKBP4Q02790 459 aaKnown RBP eCLIP5.31□□□□□ -1.56
LRRK2-204ENST00000430804 TTF1Q15361 905 aaPredicted RBP5.31□□□□□ -1.56
LRRK2-204ENST00000430804 DLGAP5Q15398 846 aa5.31□□□□□ -1.56
LRRK2-204ENST00000430804 USP37Q86T82 979 aa5.31□□□□□ -1.56
LRRK2-204ENST00000430804 SNRPA1P09661 255 aaKnown RBP5.31□□□□□ -1.56
LRRK2-204ENST00000430804 NOM1Q5C9Z4 860 aaKnown RBP5.31□□□□□ -1.56
LRRK2-204ENST00000430804 C2CD5Q86YS7 1000 aa5.31□□□□□ -1.56
LRRK2-204ENST00000430804 CERS3Q8IU89 383 aa5.31□□□□□ -1.56
LRRK2-204ENST00000430804 RETREG2Q8NC44 543 aa5.31□□□□□ -1.56
LRRK2-204ENST00000430804 EIF4G3O43432 1585 aaKnown RBP5.31□□□□□ -1.56
LRRK2-204ENST00000430804 SMC2O95347 1197 aa5.31□□□□□ -1.56
LRRK2-204ENST00000430804 SRGAP2BP0DMP2 458 aa5.31□□□□□ -1.56
LRRK2-204ENST00000430804 COMMD10Q9Y6G5 202 aa5.31□□□□□ -1.56
LRRK2-204ENST00000430804 WDR62O43379 1518 aa5.31□□□□□ -1.56
LRRK2-204ENST00000430804 CFTRP13569 1480 aa5.31□□□□□ -1.56
LRRK2-204ENST00000430804 KIF28PB7ZC32 967 aa5.3□□□□□ -1.56
LRRK2-204ENST00000430804 MVPQ14764 893 aaKnown RBP5.3□□□□□ -1.56
LRRK2-204ENST00000430804 TMEM266Q2M3C6 531 aa5.3□□□□□ -1.56
LRRK2-204ENST00000430804 TTC16Q8NEE8 873 aa5.3□□□□□ -1.56
LRRK2-204ENST00000430804 BRD4O60885 1362 aaPredicted RBP5.3□□□□□ -1.56
LRRK2-204ENST00000430804 SSBP05455 408 aaKnown RBP eCLIP5.3□□□□□ -1.56
LRRK2-204ENST00000430804 UQCRFS1P1P0C7P4 283 aa5.3□□□□□ -1.56
LRRK2-204ENST00000430804 NAP1L1P55209 391 aaKnown RBP5.3□□□□□ -1.56
LRRK2-204ENST00000430804 MRPS9P82933 396 aaKnown RBP5.3□□□□□ -1.56
LRRK2-204ENST00000430804 PARP10Q53GL7 1025 aa5.3□□□□□ -1.56
LRRK2-204ENST00000430804 RSPH3Q86UC2 560 aa5.3□□□□□ -1.56
LRRK2-204ENST00000430804 CTCFLQ8NI51 663 aaPredicted RBP5.3□□□□□ -1.56
LRRK2-204ENST00000430804 L3MBTL2Q969R5 705 aa5.3□□□□□ -1.56
LRRK2-204ENST00000430804 ORC3Q9UBD5 711 aaPredicted RBP5.3□□□□□ -1.56
LRRK2-204ENST00000430804 SAMM50Q9Y512 469 aa5.3□□□□□ -1.56
LRRK2-204ENST00000430804 TTC21BQ7Z4L5 1316 aa5.3□□□□□ -1.56
LRRK2-204ENST00000430804 ANKRD62A6NC57 917 aa5.3□□□□□ -1.56
LRRK2-204ENST00000430804 BECN2A8MW95 431 aa5.3□□□□□ -1.56
LRRK2-204ENST00000430804 NUP133Q8WUM0 1156 aa5.3□□□□□ -1.56
LRRK2-204ENST00000430804 HINFPQ9BQA5 517 aa5.3□□□□□ -1.56
LRRK2-204ENST00000430804 GOLGA6L19H0YKK7 550 aa5.3□□□□□ -1.56
LRRK2-204ENST00000430804 GPTP24298 496 aa5.3□□□□□ -1.56
LRRK2-204ENST00000430804 IREB2P48200 963 aaKnown RBP5.3□□□□□ -1.56
LRRK2-204ENST00000430804 ODR4Q5SWX8 454 aa5.3□□□□□ -1.56
LRRK2-204ENST00000430804 FBXO31Q5XUX0 539 aaPredicted RBP5.3□□□□□ -1.56
LRRK2-204ENST00000430804 JMYQ8N9B5 988 aa5.3□□□□□ -1.56
LRRK2-204ENST00000430804 SIRT1Q96EB6 747 aa5.3□□□□□ -1.56
LRRK2-204ENST00000430804 TCHPQ9BT92 498 aa5.3□□□□□ -1.56
LRRK2-204ENST00000430804 ARHGEF10LQ9HCE6 1279 aa5.3□□□□□ -1.56
LRRK2-204ENST00000430804 TBX22Q9Y458 520 aa5.3□□□□□ -1.56
LRRK2-204ENST00000430804 CCDC196A0A1B0GTZ2 297 aa5.3□□□□□ -1.56
LRRK2-204ENST00000430804 FAM47CQ5HY64 1035 aa5.3□□□□□ -1.56
LRRK2-204ENST00000430804 ANKRD45Q5TZF3 282 aa5.3□□□□□ -1.56
LRRK2-204ENST00000430804 DNMBPQ6XZF7 1577 aa5.3□□□□□ -1.56
LRRK2-204ENST00000430804 CLUAP1Q96AJ1 413 aa5.3□□□□□ -1.56
LRRK2-204ENST00000430804 ZBED4O75132 1171 aa5.29□□□□□ -1.56
LRRK2-204ENST00000430804 HMGB1P09429 215 aaKnown RBP5.29□□□□□ -1.56
LRRK2-204ENST00000430804 DZIP3Q86Y13 1208 aaKnown RBP5.29□□□□□ -1.56
LRRK2-204ENST00000430804 FAM193BQ96PV7 902 aaPredicted RBP5.29□□□□□ -1.56
LRRK2-204ENST00000430804 AP5M1Q9H0R1 490 aa5.29□□□□□ -1.56
LRRK2-204ENST00000430804 CWC25Q9NXE8 425 aaPredicted RBP5.29□□□□□ -1.56
LRRK2-204ENST00000430804 GGA1Q9UJY5 639 aa5.29□□□□□ -1.56
LRRK2-204ENST00000430804 LRFN2Q9ULH4 789 aa5.29□□□□□ -1.56
LRRK2-204ENST00000430804 C9orf84Q5VXU9 1444 aa5.29□□□□□ -1.56
LRRK2-204ENST00000430804 CBX1P83916 185 aa5.29□□□□□ -1.56
LRRK2-204ENST00000430804 PIM2Q9P1W9 311 aa5.29□□□□□ -1.56
LRRK2-204ENST00000430804 GNAI2P04899 355 aa5.29□□□□□ -1.56
LRRK2-204ENST00000430804 PRKAR2BP31323 418 aa5.29□□□□□ -1.56
LRRK2-204ENST00000430804 KIF5BP33176 963 aa5.29□□□□□ -1.56
LRRK2-204ENST00000430804 ANAPC15P60006 121 aa5.29□□□□□ -1.56
LRRK2-204ENST00000430804 ARID5AQ03989 594 aa5.29□□□□□ -1.56
LRRK2-204ENST00000430804 GTF3C6Q969F1 213 aa5.29□□□□□ -1.56
LRRK2-204ENST00000430804 HAUS2Q9NVX0 235 aa5.29□□□□□ -1.56
LRRK2-204ENST00000430804 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.29□□□□□ -1.56
LRRK2-204ENST00000430804 F8W031 263 aaPredicted RBP5.29□□□□□ -1.56
LRRK2-204ENST00000430804 RIOK3O14730 519 aaKnown RBP5.29□□□□□ -1.56
LRRK2-204ENST00000430804 RIMBP2O15034 1052 aa5.29□□□□□ -1.56
LRRK2-204ENST00000430804 SLU7O95391 586 aaKnown RBP5.29□□□□□ -1.56
LRRK2-204ENST00000430804 CETN1Q12798 172 aa5.29□□□□□ -1.56
LRRK2-204ENST00000430804 NBPF1Q3BBV0 1214 aa5.29□□□□□ -1.56
LRRK2-204ENST00000430804 TTLL7Q6ZT98 887 aa5.29□□□□□ -1.56
LRRK2-204ENST00000430804 TTC6Q86TZ1 520 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms