RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 TBC1D2Q9BYX2 928 aa10.9□□□□□ -0.66
GABPB1-205ENST00000429662 TNNQ9UQP3 1299 aa10.9□□□□□ -0.66
GABPB1-205ENST00000429662 AKAP12Q02952 1782 aa10.9□□□□□ -0.67
GABPB1-205ENST00000429662 PLSCR1O15162 318 aa10.9□□□□□ -0.67
GABPB1-205ENST00000429662 GIGYF1O75420 1035 aaPredicted RBP10.9□□□□□ -0.67
GABPB1-205ENST00000429662 GNAI1P63096 354 aa10.9□□□□□ -0.67
GABPB1-205ENST00000429662 NUCB1Q02818 461 aa10.9□□□□□ -0.67
GABPB1-205ENST00000429662 SAFB2Q14151 953 aaKnown RBP eCLIP10.9□□□□□ -0.67
GABPB1-205ENST00000429662 NFE2L2Q16236 605 aa10.9□□□□□ -0.67
GABPB1-205ENST00000429662 IFT57Q9NWB7 429 aa10.9□□□□□ -0.67
GABPB1-205ENST00000429662 CHMP5Q9NZZ3 219 aa10.9□□□□□ -0.67
GABPB1-205ENST00000429662 KIF24Q5T7B8 1368 aa10.89□□□□□ -0.67
GABPB1-205ENST00000429662 AATKQ6ZMQ8 1374 aa10.89□□□□□ -0.67
GABPB1-205ENST00000429662 TOPAZ1Q8N9V7 1692 aa10.89□□□□□ -0.67
GABPB1-205ENST00000429662 QSER1Q2KHR3 1735 aa10.89□□□□□ -0.67
GABPB1-205ENST00000429662 TUBGCP6Q96RT7 1819 aa10.89□□□□□ -0.67
GABPB1-205ENST00000429662 PTMSP20962 102 aa10.89□□□□□ -0.67
GABPB1-205ENST00000429662 TMEM57Q8N5G2 664 aa10.89□□□□□ -0.67
GABPB1-205ENST00000429662 RSPH6AQ9H0K4 717 aa10.89□□□□□ -0.67
GABPB1-205ENST00000429662 CABP1Q9NZU7 370 aa10.89□□□□□ -0.67
GABPB1-205ENST00000429662 PYGBP11216 843 aa10.88□□□□□ -0.67
GABPB1-205ENST00000429662 RBM25P49756 843 aaKnown RBP10.88□□□□□ -0.67
GABPB1-205ENST00000429662 CHRNA2Q15822 529 aa10.88□□□□□ -0.67
GABPB1-205ENST00000429662 DCAF8Q5TAQ9 597 aa10.88□□□□□ -0.67
GABPB1-205ENST00000429662 EDC4Q6P2E9 1401 aaKnown RBP10.88□□□□□ -0.67
GABPB1-205ENST00000429662 LMOD2Q6P5Q4 547 aa10.88□□□□□ -0.67
GABPB1-205ENST00000429662 HSCBQ8IWL3 235 aa10.88□□□□□ -0.67
GABPB1-205ENST00000429662 SNX21Q969T3 373 aa10.88□□□□□ -0.67
GABPB1-205ENST00000429662 KIF20BQ96Q89 1820 aa10.88□□□□□ -0.67
GABPB1-205ENST00000429662 PCDH10Q9P2E7 1040 aa10.88□□□□□ -0.67
GABPB1-205ENST00000429662 COL18A1P39060 1754 aa10.87□□□□□ -0.67
GABPB1-205ENST00000429662 OVOS2A0A0G2JMS6 1433 aa10.87□□□□□ -0.67
GABPB1-205ENST00000429662 OVOS2A0A0J9YW53 1432 aa10.87□□□□□ -0.67
GABPB1-205ENST00000429662 BCL9O00512 1426 aa10.87□□□□□ -0.67
GABPB1-205ENST00000429662 OVOS2Q6IE36 1432 aa10.87□□□□□ -0.67
GABPB1-205ENST00000429662 BMP2KLQ5H9B9 411 aa10.87□□□□□ -0.67
GABPB1-205ENST00000429662 IL27Q8NEV9 243 aa10.87□□□□□ -0.67
GABPB1-205ENST00000429662 API5Q9BZZ5 524 aaKnown RBP10.87□□□□□ -0.67
GABPB1-205ENST00000429662 PRDM11Q9NQV5 511 aa10.87□□□□□ -0.67
GABPB1-205ENST00000429662 POLKQ9UBT6 870 aa10.87□□□□□ -0.67
GABPB1-205ENST00000429662 ISY1Q9ULR0 285 aaKnown RBP10.87□□□□□ -0.67
GABPB1-205ENST00000429662 CIZ1Q9ULV3 898 aaPredicted RBP10.87□□□□□ -0.67
GABPB1-205ENST00000429662 ITSN1Q15811 1721 aa10.86□□□□□ -0.67
GABPB1-205ENST00000429662 COL5A2P05997 1499 aaPredicted RBP10.86□□□□□ -0.67
GABPB1-205ENST00000429662 PRKAR2BP31323 418 aa10.86□□□□□ -0.67
GABPB1-205ENST00000429662 CHD1LQ86WJ1 897 aa10.86□□□□□ -0.67
GABPB1-205ENST00000429662 FAM43AQ8N2R8 423 aa10.86□□□□□ -0.67
GABPB1-205ENST00000429662 FBXO3Q9UK99 471 aa10.86□□□□□ -0.67
GABPB1-205ENST00000429662 CPSF1Q10570 1443 aaKnown RBP10.85□□□□□ -0.67
GABPB1-205ENST00000429662 VAMP4O75379 141 aa10.85□□□□□ -0.67
GABPB1-205ENST00000429662 ZNF853P0CG23 659 aa10.85□□□□□ -0.67
GABPB1-205ENST00000429662 MFAP1P55081 439 aaKnown RBP10.85□□□□□ -0.67
GABPB1-205ENST00000429662 IRX5P78411 483 aaPredicted RBP10.85□□□□□ -0.67
GABPB1-205ENST00000429662 LARP1Q6PKG0 1096 aaKnown RBP10.85□□□□□ -0.67
GABPB1-205ENST00000429662 MRPL50Q8N5N7 158 aaKnown RBP10.85□□□□□ -0.67
GABPB1-205ENST00000429662 SLKQ9H2G2 1235 aaPredicted RBP10.85□□□□□ -0.67
GABPB1-205ENST00000429662 ADCY9O60503 1353 aa10.84□□□□□ -0.67
GABPB1-205ENST00000429662 NHSQ6T4R5 1651 aa10.84□□□□□ -0.67
GABPB1-205ENST00000429662 DDX11L8A8MPP1 907 aa10.84□□□□□ -0.67
GABPB1-205ENST00000429662 WASLO00401 505 aaPredicted RBP10.84□□□□□ -0.67
GABPB1-205ENST00000429662 ZBTB7BO15156 539 aaPredicted RBP10.84□□□□□ -0.67
GABPB1-205ENST00000429662 MCM4P33991 863 aa10.84□□□□□ -0.67
GABPB1-205ENST00000429662 IL13P35225 146 aa10.84□□□□□ -0.67
GABPB1-205ENST00000429662 CPDO75976 1380 aa10.83□□□□□ -0.68
GABPB1-205ENST00000429662 PLCG2P16885 1265 aa10.83□□□□□ -0.68
GABPB1-205ENST00000429662 STRN4Q9NRL3 753 aa10.83□□□□□ -0.68
GABPB1-205ENST00000429662 BRPF3Q9ULD4 1205 aa10.83□□□□□ -0.68
GABPB1-205ENST00000429662 PCDHB8Q9UN66 801 aa10.83□□□□□ -0.68
GABPB1-205ENST00000429662 ABCC4O15439 1325 aa10.82□□□□□ -0.68
GABPB1-205ENST00000429662 COG3Q96JB2 828 aa10.82□□□□□ -0.68
GABPB1-205ENST00000429662 MTFR1LQ9H019 292 aa10.82□□□□□ -0.68
GABPB1-205ENST00000429662 SLC15A2Q16348 729 aa10.81□□□□□ -0.68
GABPB1-205ENST00000429662 ATP10DQ9P241 1426 aa10.81□□□□□ -0.68
GABPB1-205ENST00000429662 GOLGA6L3A6NEY3 463 aa10.8□□□□□ -0.68
GABPB1-205ENST00000429662 HSPA6P17066 643 aa10.8□□□□□ -0.68
GABPB1-205ENST00000429662 SKOR2Q2VWA4 1001 aaPredicted RBP10.8□□□□□ -0.68
GABPB1-205ENST00000429662 TWISTNBQ3B726 338 aaPredicted RBP10.8□□□□□ -0.68
GABPB1-205ENST00000429662 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.8□□□□□ -0.68
GABPB1-205ENST00000429662 BCL11BQ9C0K0 894 aaPredicted RBP10.8□□□□□ -0.68
GABPB1-205ENST00000429662 BTAF1O14981 1849 aa10.8□□□□□ -0.68
GABPB1-205ENST00000429662 RGPD5Q99666 1765 aa10.8□□□□□ -0.68
GABPB1-205ENST00000429662 CRB1P82279 1406 aa10.79□□□□□ -0.68
GABPB1-205ENST00000429662 VASPP50552 380 aaPredicted RBP10.79□□□□□ -0.68
GABPB1-205ENST00000429662 ZC3H6P61129 1189 aaKnown RBP10.79□□□□□ -0.68
GABPB1-205ENST00000429662 ANKRD45Q5TZF3 282 aa10.79□□□□□ -0.68
GABPB1-205ENST00000429662 SLAIN1Q8ND83 568 aa10.79□□□□□ -0.68
GABPB1-205ENST00000429662 GBP4Q96PP9 640 aa10.79□□□□□ -0.68
GABPB1-205ENST00000429662 ARXQ96QS3 562 aa10.79□□□□□ -0.68
GABPB1-205ENST00000429662 THRAP3Q9Y2W1 955 aaKnown RBP10.79□□□□□ -0.68
GABPB1-205ENST00000429662 FSD2A1L4K1 749 aa10.78□□□□□ -0.68
GABPB1-205ENST00000429662 YBX3P16989 372 aaKnown RBP eCLIP10.78□□□□□ -0.681e-6■□□□□ 11.3
GABPB1-205ENST00000429662 DDIT3P35638 169 aa10.78□□□□□ -0.68
GABPB1-205ENST00000429662 TXNRD1Q16881 649 aa10.78□□□□□ -0.68
GABPB1-205ENST00000429662 NUDT16Q96DE0 195 aaKnown RBP10.78□□□□□ -0.68
GABPB1-205ENST00000429662 PHACTR3Q96KR7 559 aa10.78□□□□□ -0.68
GABPB1-205ENST00000429662 LNPKQ9C0E8 428 aa10.78□□□□□ -0.68
GABPB1-205ENST00000429662 MBIPQ9NS73 344 aa10.78□□□□□ -0.68
GABPB1-205ENST00000429662 TRAK2O60296 914 aa10.77□□□□□ -0.68
GABPB1-205ENST00000429662 CDC45O75419 566 aa10.77□□□□□ -0.68
GABPB1-205ENST00000429662 HSP90AB1P08238 724 aaKnown RBP10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms