RNA–Protein interactions for RNA: ENST00000428554.6

CCDC30-203, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 3,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-203ENST00000428554 SLC39A13Q96H72 371 aa4.61□□□□□ -1.67
CCDC30-203ENST00000428554 C8orf48Q96LL4 319 aa4.61□□□□□ -1.67
CCDC30-203ENST00000428554 DDX56Q9NY93 547 aaKnown RBP4.61□□□□□ -1.67
CCDC30-203ENST00000428554 GABBR1Q9UBS5 961 aa4.61□□□□□ -1.67
CCDC30-203ENST00000428554 CFAP69A5D8W1 941 aa4.61□□□□□ -1.67
CCDC30-203ENST00000428554 TAGLNQ01995 201 aaKnown RBP4.61□□□□□ -1.67
CCDC30-203ENST00000428554 STAG1Q8WVM7 1258 aa4.61□□□□□ -1.67
CCDC30-203ENST00000428554 SPC25Q9HBM1 224 aa4.61□□□□□ -1.67
CCDC30-203ENST00000428554 EGFL7Q9UHF1 273 aa4.61□□□□□ -1.67
CCDC30-203ENST00000428554 CCSAPQ6IQ19 270 aaPredicted RBP4.61□□□□□ -1.67
CCDC30-203ENST00000428554 ZBTB33Q86T24 672 aa4.61□□□□□ -1.67
CCDC30-203ENST00000428554 NFATC2IPQ8NCF5 419 aa4.61□□□□□ -1.67
CCDC30-203ENST00000428554 C1orf216Q8TAB5 229 aa4.61□□□□□ -1.67
CCDC30-203ENST00000428554 ASB16Q96NS5 453 aa4.61□□□□□ -1.67
CCDC30-203ENST00000428554 RPS6KC1Q96S38 1066 aa4.61□□□□□ -1.67
CCDC30-203ENST00000428554 METTL5Q9NRN9 209 aaKnown RBP4.61□□□□□ -1.67
CCDC30-203ENST00000428554 EVA1CP58658 441 aa4.6□□□□□ -1.67
CCDC30-203ENST00000428554 BIRC2Q13490 618 aa4.6□□□□□ -1.67
CCDC30-203ENST00000428554 NCOA4Q13772 614 aa4.6□□□□□ -1.67
CCDC30-203ENST00000428554 SLFNL1Q499Z3 407 aa4.6□□□□□ -1.67
CCDC30-203ENST00000428554 PLA2G2CQ5R387 149 aa4.6□□□□□ -1.67
CCDC30-203ENST00000428554 RNF135Q8IUD6 432 aa4.6□□□□□ -1.67
CCDC30-203ENST00000428554 ZNF511Q8NB15 262 aa4.6□□□□□ -1.67
CCDC30-203ENST00000428554 STK32AQ8WU08 396 aa4.6□□□□□ -1.67
CCDC30-203ENST00000428554 SLAIN2Q9P270 581 aa4.6□□□□□ -1.67
CCDC30-203ENST00000428554 FBXO9Q9UK97 447 aaPredicted RBP4.6□□□□□ -1.67
CCDC30-203ENST00000428554 PRC1O43663 620 aa4.6□□□□□ -1.67
CCDC30-203ENST00000428554 ERFEQ4G0M1 354 aa4.6□□□□□ -1.67
CCDC30-203ENST00000428554 PLPP7Q8NBV4 271 aa4.6□□□□□ -1.67
CCDC30-203ENST00000428554 CLP1Q92989 425 aaKnown RBP4.6□□□□□ -1.67
CCDC30-203ENST00000428554 RIMBP3CA6NJZ7 1639 aa4.6□□□□□ -1.67
CCDC30-203ENST00000428554 RIMBP3BA6NNM3 1639 aa4.6□□□□□ -1.67
CCDC30-203ENST00000428554 RIMBP3Q9UFD9 1639 aa4.6□□□□□ -1.67
CCDC30-203ENST00000428554 SYNJ2O15056 1496 aa4.59□□□□□ -1.67
CCDC30-203ENST00000428554 A0A0G2JS52 829 aa4.59□□□□□ -1.67
CCDC30-203ENST00000428554 COL6A1P12109 1028 aa4.59□□□□□ -1.67
CCDC30-203ENST00000428554 COPB2P35606 906 aa4.59□□□□□ -1.67
CCDC30-203ENST00000428554 BMS1Q14692 1282 aaKnown RBP4.59□□□□□ -1.67
CCDC30-203ENST00000428554 CRTC2Q53ET0 693 aaPredicted RBP4.59□□□□□ -1.67
CCDC30-203ENST00000428554 PLEKHM2Q8IWE5 1019 aa4.59□□□□□ -1.67
CCDC30-203ENST00000428554 OSBPL2Q9H1P3 480 aa4.59□□□□□ -1.67
CCDC30-203ENST00000428554 IFT57Q9NWB7 429 aa4.59□□□□□ -1.67
CCDC30-203ENST00000428554 GIGYF1O75420 1035 aaPredicted RBP4.59□□□□□ -1.67
CCDC30-203ENST00000428554 MAN1A1P33908 653 aa4.59□□□□□ -1.67
CCDC30-203ENST00000428554 SH3BP2P78314 561 aa4.59□□□□□ -1.67
CCDC30-203ENST00000428554 UBE4AQ14139 1066 aa4.59□□□□□ -1.67
CCDC30-203ENST00000428554 AGERQ15109 404 aa4.59□□□□□ -1.67
CCDC30-203ENST00000428554 DZIP3Q86Y13 1208 aaKnown RBP4.59□□□□□ -1.67
CCDC30-203ENST00000428554 IPO4Q8TEX9 1081 aaKnown RBP4.59□□□□□ -1.67
CCDC30-203ENST00000428554 ARHGEF10LQ9HCE6 1279 aa4.59□□□□□ -1.67
CCDC30-203ENST00000428554 MKRN1Q9UHC7 482 aaKnown RBP4.59□□□□□ -1.67
CCDC30-203ENST00000428554 PRR12Q9ULL5 1215 aa4.59□□□□□ -1.67
CCDC30-203ENST00000428554 PRKAB1Q9Y478 270 aa4.59□□□□□ -1.67
CCDC30-203ENST00000428554 RNF223E7ERA6 249 aa4.59□□□□□ -1.68
CCDC30-203ENST00000428554 WDHD1O75717 1129 aaPredicted RBP4.59□□□□□ -1.68
CCDC30-203ENST00000428554 FGAP02671 866 aa4.59□□□□□ -1.68
CCDC30-203ENST00000428554 XRCC5P13010 732 aaKnown RBP4.59□□□□□ -1.68
CCDC30-203ENST00000428554 TRAF7Q6Q0C0 670 aa4.59□□□□□ -1.68
CCDC30-203ENST00000428554 FRMD6Q96NE9 622 aa4.59□□□□□ -1.68
CCDC30-203ENST00000428554 CHIC2Q9UKJ5 165 aa4.59□□□□□ -1.68
CCDC30-203ENST00000428554 HSP90AA1P07900 732 aaKnown RBP4.58□□□□□ -1.68
CCDC30-203ENST00000428554 ZNF280DQ6N043 979 aa4.58□□□□□ -1.68
CCDC30-203ENST00000428554 S100BP04271 92 aaPredicted RBP4.58□□□□□ -1.68
CCDC30-203ENST00000428554 GTF2F1P35269 517 aaKnown RBP eCLIP4.58□□□□□ -1.68
CCDC30-203ENST00000428554 BPHLQ86WA6 291 aaPredicted RBP4.58□□□□□ -1.68
CCDC30-203ENST00000428554 ZSWIM4Q9H7M6 989 aa4.58□□□□□ -1.68
CCDC30-203ENST00000428554 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.58□□□□□ -1.68
CCDC30-203ENST00000428554 NRBP1Q9UHY1 535 aa4.58□□□□□ -1.68
CCDC30-203ENST00000428554 NOVA2Q9UNW9 492 aaKnown RBP4.58□□□□□ -1.68
CCDC30-203ENST00000428554 DNAJC6O75061 913 aa4.57□□□□□ -1.68
CCDC30-203ENST00000428554 ZRANB2O95218 330 aaKnown RBP eCLIP4.57□□□□□ -1.68
CCDC30-203ENST00000428554 KIF4AO95239 1232 aa4.57□□□□□ -1.68
CCDC30-203ENST00000428554 GGCXP38435 758 aa4.57□□□□□ -1.68
CCDC30-203ENST00000428554 FAM69CQ0P6D2 419 aa4.57□□□□□ -1.68
CCDC30-203ENST00000428554 VPS72Q15906 364 aa4.57□□□□□ -1.68
CCDC30-203ENST00000428554 FMNL3Q8IVF7 1028 aa4.57□□□□□ -1.68
CCDC30-203ENST00000428554 SCINQ9Y6U3 715 aa4.57□□□□□ -1.68
CCDC30-203ENST00000428554 CC2D2AQ9P2K1 1620 aa4.57□□□□□ -1.68
CCDC30-203ENST00000428554 USP17L15C9J2P7 530 aa4.57□□□□□ -1.68
CCDC30-203ENST00000428554 USP17L10C9JJH3 530 aa4.57□□□□□ -1.68
CCDC30-203ENST00000428554 USP17L13C9JLJ4 530 aa4.57□□□□□ -1.68
CCDC30-203ENST00000428554 USP17L12C9JPN9 530 aa4.57□□□□□ -1.68
CCDC30-203ENST00000428554 USP17L11C9JVI0 530 aa4.57□□□□□ -1.68
CCDC30-203ENST00000428554 USP17L21D6R901 530 aa4.57□□□□□ -1.68
CCDC30-203ENST00000428554 USP17L18D6R9N7 530 aa4.57□□□□□ -1.68
CCDC30-203ENST00000428554 USP17L22D6RA61 530 aa4.57□□□□□ -1.68
CCDC30-203ENST00000428554 USP17L17D6RBQ6 530 aa4.57□□□□□ -1.68
CCDC30-203ENST00000428554 USP17L19D6RCP7 530 aa4.57□□□□□ -1.68
CCDC30-203ENST00000428554 USP17L20D6RJB6 530 aa4.57□□□□□ -1.68
CCDC30-203ENST00000428554 ZNF500O60304 480 aaPredicted RBP4.57□□□□□ -1.68
CCDC30-203ENST00000428554 PDGFRBP09619 1106 aa4.57□□□□□ -1.68
CCDC30-203ENST00000428554 SERPINB4P48594 390 aa4.57□□□□□ -1.68
CCDC30-203ENST00000428554 CLDN10P78369 228 aa4.57□□□□□ -1.68
CCDC30-203ENST00000428554 SKOR1P84550 965 aa4.57□□□□□ -1.68
CCDC30-203ENST00000428554 USP17L24Q0WX57 530 aa4.57□□□□□ -1.68
CCDC30-203ENST00000428554 CXorf38Q8TB03 319 aa4.57□□□□□ -1.68
CCDC30-203ENST00000428554 C1QTNF2Q9BXJ5 285 aa4.57□□□□□ -1.68
CCDC30-203ENST00000428554 DMGDHQ9UI17 866 aaKnown RBP4.57□□□□□ -1.68
CCDC30-203ENST00000428554 RASA1P20936 1047 aa4.57□□□□□ -1.68
CCDC30-203ENST00000428554 POU5F1BQ06416 359 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms