RNA–Protein interactions for RNA: ENST00000428253.1

MMP11-202, Transcript of matrix metallopeptidase 11, humanhuman

TSL 4

Gene MMP11, Length 537 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-202ENST00000428253 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.39■■□□□ 1.33
MMP11-202ENST00000428253 GIGYF1O75420 1035 aaPredicted RBP23.39■■□□□ 1.33
MMP11-202ENST00000428253 SLC16A10Q8TF71 515 aa23.39■■□□□ 1.33
MMP11-202ENST00000428253 USP16Q9Y5T5 823 aa23.39■■□□□ 1.33
MMP11-202ENST00000428253 STARD3NLO95772 234 aa23.38■■□□□ 1.33
MMP11-202ENST00000428253 CALD1Q05682 793 aaKnown RBP23.38■■□□□ 1.33
MMP11-202ENST00000428253 IFT57Q9NWB7 429 aa23.38■■□□□ 1.33
MMP11-202ENST00000428253 RTCBQ9Y3I0 505 aaKnown RBP23.38■■□□□ 1.33
MMP11-202ENST00000428253 COL24A1Q17RW2 1714 aa23.38■■□□□ 1.33
MMP11-202ENST00000428253 ADRA2BP18089 450 aa23.37■■□□□ 1.33
MMP11-202ENST00000428253 ZBTB1Q9Y2K1 713 aa23.37■■□□□ 1.33
MMP11-202ENST00000428253 LRP5O75197 1615 aa23.37■■□□□ 1.33
MMP11-202ENST00000428253 SOS1Q07889 1333 aaPredicted RBP23.36■■□□□ 1.33
MMP11-202ENST00000428253 MBIPQ9NS73 344 aa23.36■■□□□ 1.33
MMP11-202ENST00000428253 IL16Q14005 1332 aa23.35■■□□□ 1.33
MMP11-202ENST00000428253 LAMB4A4D0S4 1761 aa23.35■■□□□ 1.33
MMP11-202ENST00000428253 GNAI1P63096 354 aa23.35■■□□□ 1.33
MMP11-202ENST00000428253 SGIP1Q9BQI5 828 aa23.35■■□□□ 1.33
MMP11-202ENST00000428253 MTFR1LQ9H019 292 aa23.35■■□□□ 1.33
MMP11-202ENST00000428253 ZNF521Q96K83 1311 aa23.34■■□□□ 1.33
MMP11-202ENST00000428253 PHF14O94880 888 aa23.34■■□□□ 1.33
MMP11-202ENST00000428253 ZBTB7AO95365 584 aa23.34■■□□□ 1.33
MMP11-202ENST00000428253 WDR63Q8IWG1 891 aa23.34■■□□□ 1.33
MMP11-202ENST00000428253 ARHGEF1Q92888 912 aaKnown RBP23.34■■□□□ 1.33
MMP11-202ENST00000428253 LAS1LQ9Y4W2 734 aaKnown RBP23.34■■□□□ 1.33
MMP11-202ENST00000428253 C4AP0C0L4 1744 aa23.33■■□□□ 1.33
MMP11-202ENST00000428253 A1BGP04217 495 aa23.33■■□□□ 1.33
MMP11-202ENST00000428253 EIF5P55010 431 aaKnown RBP23.33■■□□□ 1.33
MMP11-202ENST00000428253 TRAPPC3LQ5T215 181 aa23.33■■□□□ 1.33
MMP11-202ENST00000428253 PTGER2P43116 358 aa23.32■■□□□ 1.32
MMP11-202ENST00000428253 SPON1Q9HCB6 807 aa23.32■■□□□ 1.32
MMP11-202ENST00000428253 SALL2Q9Y467 1007 aaPredicted RBP23.32■■□□□ 1.32
MMP11-202ENST00000428253 KRT24Q2M2I5 525 aa23.31■■□□□ 1.32
MMP11-202ENST00000428253 NBPF26B4DH59 902 aa23.3■■□□□ 1.32
MMP11-202ENST00000428253 IL6STP40189 918 aaPredicted RBP23.3■■□□□ 1.32
MMP11-202ENST00000428253 NBPF10Q6P3W6 841 aaKnown RBP23.3■■□□□ 1.32
MMP11-202ENST00000428253 NBPF15Q8N660 670 aa23.3■■□□□ 1.32
MMP11-202ENST00000428253 ATF5Q9Y2D1 282 aaPredicted RBP23.3■■□□□ 1.32
MMP11-202ENST00000428253 CANXP27824 592 aaKnown RBP23.29■■□□□ 1.32
MMP11-202ENST00000428253 COL15A1P39059 1388 aa23.28■■□□□ 1.32
MMP11-202ENST00000428253 MSH5O43196 834 aa23.28■■□□□ 1.32
MMP11-202ENST00000428253 SRCAPQ6ZRS2 3230 aa23.28■■□□□ 1.32
MMP11-202ENST00000428253 HOXB7P09629 217 aa23.27■■□□□ 1.32
MMP11-202ENST00000428253 SPINK5Q9NQ38 1064 aaPredicted RBP23.27■■□□□ 1.32
MMP11-202ENST00000428253 USP42Q9H9J4 1324 aaKnown RBP23.27■■□□□ 1.32
MMP11-202ENST00000428253 RFC4P35249 363 aa23.26■■□□□ 1.31
MMP11-202ENST00000428253 GYS1P13807 737 aa23.25■■□□□ 1.31
MMP11-202ENST00000428253 PIP4K2AP48426 406 aaPredicted RBP23.25■■□□□ 1.31
MMP11-202ENST00000428253 ERBB4Q15303 1308 aa23.25■■□□□ 1.31
MMP11-202ENST00000428253 PDIA6Q15084 440 aa23.24■■□□□ 1.31
MMP11-202ENST00000428253 DUSP27Q5VZP5 1158 aa23.24■■□□□ 1.31
MMP11-202ENST00000428253 LRP10Q7Z4F1 713 aa23.24■■□□□ 1.31
MMP11-202ENST00000428253 C8orf58Q8NAV2 365 aa23.24■■□□□ 1.31
MMP11-202ENST00000428253 TSR2Q969E8 191 aaKnown RBP23.24■■□□□ 1.31
MMP11-202ENST00000428253 SRP68Q9UHB9 627 aaKnown RBP23.24■■□□□ 1.31
MMP11-202ENST00000428253 NARFQ9UHQ1 456 aa23.24■■□□□ 1.31
MMP11-202ENST00000428253 MSL1Q68DK7 614 aa23.23■■□□□ 1.31
MMP11-202ENST00000428253 BCL2L12Q9HB09 334 aa23.23■■□□□ 1.31
MMP11-202ENST00000428253 A0A087WZG4 1122 aa23.22■■□□□ 1.31
MMP11-202ENST00000428253 FANCIQ9NVI1 1328 aa23.22■■□□□ 1.31
MMP11-202ENST00000428253 NLGN1Q8N2Q7 840 aa23.21■■□□□ 1.31
MMP11-202ENST00000428253 EIF2S2P20042 333 aaKnown RBP23.2■■□□□ 1.3
MMP11-202ENST00000428253 TSPYL6Q8N831 410 aa23.2■■□□□ 1.3
MMP11-202ENST00000428253 SCN7AQ01118 1682 aa23.19■■□□□ 1.3
MMP11-202ENST00000428253 ZPR1O75312 459 aa23.19■■□□□ 1.3
MMP11-202ENST00000428253 CAMTA2O94983 1202 aa23.19■■□□□ 1.3
MMP11-202ENST00000428253 FKBP8Q14318 412 aa23.19■■□□□ 1.3
MMP11-202ENST00000428253 PROSER3Q2NL68 480 aa23.19■■□□□ 1.3
MMP11-202ENST00000428253 USPL1Q5W0Q7 1092 aa23.19■■□□□ 1.3
MMP11-202ENST00000428253 TBC1D2BQ9UPU7 963 aa23.18■■□□□ 1.3
MMP11-202ENST00000428253 BCORQ6W2J9 1755 aa23.18■■□□□ 1.3
MMP11-202ENST00000428253 ELL2O00472 640 aaPredicted RBP23.17■■□□□ 1.3
MMP11-202ENST00000428253 POLD1P28340 1107 aa23.17■■□□□ 1.3
MMP11-202ENST00000428253 TM4SF1P30408 202 aa23.17■■□□□ 1.3
MMP11-202ENST00000428253 GOLGA2Q08379 1002 aa23.17■■□□□ 1.3
MMP11-202ENST00000428253 HDGFL1Q5TGJ6 251 aa23.17■■□□□ 1.3
MMP11-202ENST00000428253 DZIP3Q86Y13 1208 aaKnown RBP23.17■■□□□ 1.3
MMP11-202ENST00000428253 ARXQ96QS3 562 aa23.17■■□□□ 1.3
MMP11-202ENST00000428253 DDX21Q9NR30 783 aaKnown RBP eCLIP23.17■■□□□ 1.3
MMP11-202ENST00000428253 ZNF330Q9Y3S2 320 aaPredicted RBP23.17■■□□□ 1.3
MMP11-202ENST00000428253 RGL2O15211 777 aa23.16■■□□□ 1.3
MMP11-202ENST00000428253 MYH16Q9H6N6 1097 aa23.16■■□□□ 1.3
MMP11-202ENST00000428253 MMP10P09238 476 aa23.15■■□□□ 1.3
MMP11-202ENST00000428253 MYL6BP14649 208 aa23.15■■□□□ 1.3
MMP11-202ENST00000428253 SLFN5Q08AF3 891 aa23.15■■□□□ 1.3
MMP11-202ENST00000428253 TRMT2AQ8IZ69 625 aaKnown RBP23.15■■□□□ 1.3
MMP11-202ENST00000428253 NECTIN2Q92692 538 aa23.15■■□□□ 1.3
MMP11-202ENST00000428253 ANXA1P04083 346 aa23.14■■□□□ 1.29
MMP11-202ENST00000428253 CHPF2Q9P2E5 772 aa23.14■■□□□ 1.29
MMP11-202ENST00000428253 E9PSI1 815 aa23.13■■□□□ 1.29
MMP11-202ENST00000428253 EXOSC9Q06265 439 aaKnown RBP23.13■■□□□ 1.29
MMP11-202ENST00000428253 DDR1Q08345 913 aa23.13■■□□□ 1.29
MMP11-202ENST00000428253 TWISTNBQ3B726 338 aaPredicted RBP23.13■■□□□ 1.29
MMP11-202ENST00000428253 TTLL7Q6ZT98 887 aa23.13■■□□□ 1.29
MMP11-202ENST00000428253 NPM2Q86SE8 214 aaKnown RBP23.13■■□□□ 1.29
MMP11-202ENST00000428253 DBF4Q9UBU7 674 aaPredicted RBP23.13■■□□□ 1.29
MMP11-202ENST00000428253 NFIXQ14938 502 aa23.12■■□□□ 1.29
MMP11-202ENST00000428253 CLEC4GQ6UXB4 293 aa23.12■■□□□ 1.29
MMP11-202ENST00000428253 CDCA7LQ96GN5 454 aa23.12■■□□□ 1.29
MMP11-202ENST00000428253 ERVV-1B6SEH8 477 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms