RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 ARHGEF1Q92888 912 aaKnown RBP20.62■□□□□ 0.89
CLK3P2-201ENST00000427566 SYT17Q9BSW7 474 aa20.62■□□□□ 0.89
CLK3P2-201ENST00000427566 CCER2I3L3R5 266 aa20.61■□□□□ 0.89
CLK3P2-201ENST00000427566 CCDC87Q9NVE4 849 aa20.61■□□□□ 0.89
CLK3P2-201ENST00000427566 HEG1Q9ULI3 1381 aa20.6■□□□□ 0.89
CLK3P2-201ENST00000427566 DCAF8L1A6NGE4 600 aa20.6■□□□□ 0.89
CLK3P2-201ENST00000427566 CYP19A1P11511 503 aaPredicted RBP20.6■□□□□ 0.89
CLK3P2-201ENST00000427566 INTS5Q6P9B9 1019 aaKnown RBP20.6■□□□□ 0.89
CLK3P2-201ENST00000427566 VSIG10Q8N0Z9 540 aa20.6■□□□□ 0.89
CLK3P2-201ENST00000427566 FMNL2Q96PY5 1086 aa20.6■□□□□ 0.89
CLK3P2-201ENST00000427566 ADRA2BP18089 450 aa20.59■□□□□ 0.89
CLK3P2-201ENST00000427566 TAF7Q15545 349 aaPredicted RBP20.59■□□□□ 0.89
CLK3P2-201ENST00000427566 KDM3BQ7LBC6 1761 aa20.58■□□□□ 0.88
CLK3P2-201ENST00000427566 STARD3NLO95772 234 aa20.57■□□□□ 0.88
CLK3P2-201ENST00000427566 CANXP27824 592 aaKnown RBP20.57■□□□□ 0.88
CLK3P2-201ENST00000427566 LMOD3Q0VAK6 560 aa20.56■□□□□ 0.88
CLK3P2-201ENST00000427566 ZBTB1Q9Y2K1 713 aa20.56■□□□□ 0.88
CLK3P2-201ENST00000427566 ZNF330Q9Y3S2 320 aaPredicted RBP20.56■□□□□ 0.88
CLK3P2-201ENST00000427566 TEX13AQ9BXU3 409 aaPredicted RBP20.56■□□□□ 0.88
CLK3P2-201ENST00000427566 SRP68Q9UHB9 627 aaKnown RBP20.56■□□□□ 0.88
CLK3P2-201ENST00000427566 SALL2Q9Y467 1007 aaPredicted RBP20.55■□□□□ 0.88
CLK3P2-201ENST00000427566 MMP10P09238 476 aa20.54■□□□□ 0.88
CLK3P2-201ENST00000427566 SOS1Q07889 1333 aaPredicted RBP20.54■□□□□ 0.88
CLK3P2-201ENST00000427566 PRAMEF22A3QJZ6 481 aa20.53■□□□□ 0.88
CLK3P2-201ENST00000427566 ZPR1O75312 459 aa20.53■□□□□ 0.88
CLK3P2-201ENST00000427566 GYS1P13807 737 aa20.53■□□□□ 0.88
CLK3P2-201ENST00000427566 PELP1Q8IZL8 1130 aaKnown RBP20.53■□□□□ 0.88
CLK3P2-201ENST00000427566 NLGN1Q8N2Q7 840 aa20.53■□□□□ 0.88
CLK3P2-201ENST00000427566 COL15A1P39059 1388 aa20.53■□□□□ 0.88
CLK3P2-201ENST00000427566 LAMB4A4D0S4 1761 aa20.52■□□□□ 0.88
CLK3P2-201ENST00000427566 NLGN2Q8NFZ4 835 aa20.52■□□□□ 0.88
CLK3P2-201ENST00000427566 USP42Q9H9J4 1324 aaKnown RBP20.52■□□□□ 0.88
CLK3P2-201ENST00000427566 USPL1Q5W0Q7 1092 aa20.51■□□□□ 0.87
CLK3P2-201ENST00000427566 NPM2Q86SE8 214 aaKnown RBP20.51■□□□□ 0.87
CLK3P2-201ENST00000427566 LAS1LQ9Y4W2 734 aaKnown RBP20.51■□□□□ 0.87
CLK3P2-201ENST00000427566 USP16Q9Y5T5 823 aa20.51■□□□□ 0.87
CLK3P2-201ENST00000427566 A1BGP04217 495 aa20.5■□□□□ 0.87
CLK3P2-201ENST00000427566 CENPBP07199 599 aaPredicted RBP20.5■□□□□ 0.87
CLK3P2-201ENST00000427566 SNRPA1P09661 255 aaKnown RBP20.5■□□□□ 0.87
CLK3P2-201ENST00000427566 TSPYL4Q9UJ04 414 aa20.5■□□□□ 0.87
CLK3P2-201ENST00000427566 PIP4K2AP48426 406 aaPredicted RBP20.5■□□□□ 0.87
CLK3P2-201ENST00000427566 EIF4A1P60842 406 aaKnown RBP20.49■□□□□ 0.87
CLK3P2-201ENST00000427566 FKBP8Q14318 412 aa20.49■□□□□ 0.87
CLK3P2-201ENST00000427566 WWC1Q8IX03 1113 aa20.49■□□□□ 0.87
CLK3P2-201ENST00000427566 PARP3Q9Y6F1 533 aa20.49■□□□□ 0.87
CLK3P2-201ENST00000427566 CHL1O00533 1208 aa20.48■□□□□ 0.87
CLK3P2-201ENST00000427566 GPR162Q16538 588 aa20.48■□□□□ 0.87
CLK3P2-201ENST00000427566 N4BP2Q86UW6 1770 aaPredicted RBP20.47■□□□□ 0.87
CLK3P2-201ENST00000427566 A0A087WZG4 1122 aa20.47■□□□□ 0.87
CLK3P2-201ENST00000427566 CCDC27Q2M243 656 aa20.47■□□□□ 0.87
CLK3P2-201ENST00000427566 NARFQ9UHQ1 456 aa20.47■□□□□ 0.87
CLK3P2-201ENST00000427566 CD2APQ9Y5K6 639 aa20.47■□□□□ 0.87
CLK3P2-201ENST00000427566 ZNF853P0CG23 659 aa20.46■□□□□ 0.87
CLK3P2-201ENST00000427566 EIF5P55010 431 aaKnown RBP20.46■□□□□ 0.87
CLK3P2-201ENST00000427566 TBC1D2BQ9UPU7 963 aa20.46■□□□□ 0.87
CLK3P2-201ENST00000427566 AFDNP55196 1824 aaKnown RBP20.46■□□□□ 0.87
CLK3P2-201ENST00000427566 KIF13BQ9NQT8 1826 aa20.45■□□□□ 0.86
CLK3P2-201ENST00000427566 IL6STP40189 918 aaPredicted RBP20.45■□□□□ 0.86
CLK3P2-201ENST00000427566 KRT24Q2M2I5 525 aa20.45■□□□□ 0.86
CLK3P2-201ENST00000427566 CFAP44Q96MT7 982 aa20.45■□□□□ 0.86
CLK3P2-201ENST00000427566 WWC3Q9ULE0 1092 aa20.45■□□□□ 0.86
CLK3P2-201ENST00000427566 SCN7AQ01118 1682 aa20.45■□□□□ 0.86
CLK3P2-201ENST00000427566 MBIPQ9NS73 344 aa20.44■□□□□ 0.86
CLK3P2-201ENST00000427566 BABAM1Q9NWV8 329 aa20.44■□□□□ 0.86
CLK3P2-201ENST00000427566 CHD4Q14839 1912 aa20.44■□□□□ 0.86
CLK3P2-201ENST00000427566 GIGYF1O75420 1035 aaPredicted RBP20.43■□□□□ 0.86
CLK3P2-201ENST00000427566 BICDL1Q6ZP65 573 aa20.43■□□□□ 0.86
CLK3P2-201ENST00000427566 BCORQ6W2J9 1755 aa20.43■□□□□ 0.86
CLK3P2-201ENST00000427566 NCBP3Q53F19 620 aaKnown RBP20.43■□□□□ 0.86
CLK3P2-201ENST00000427566 DDR1Q08345 913 aa20.42■□□□□ 0.86
CLK3P2-201ENST00000427566 IFT57Q9NWB7 429 aa20.42■□□□□ 0.86
CLK3P2-201ENST00000427566 DZIP3Q86Y13 1208 aaKnown RBP20.41■□□□□ 0.86
CLK3P2-201ENST00000427566 NGEFQ8N5V2 710 aa20.41■□□□□ 0.86
CLK3P2-201ENST00000427566 TSR2Q969E8 191 aaKnown RBP20.41■□□□□ 0.86
CLK3P2-201ENST00000427566 BCL2L12Q9HB09 334 aa20.41■□□□□ 0.86
CLK3P2-201ENST00000427566 SPINK5Q9NQ38 1064 aaPredicted RBP20.41■□□□□ 0.86
CLK3P2-201ENST00000427566 GNAI1P63096 354 aa20.4■□□□□ 0.86
CLK3P2-201ENST00000427566 CALD1Q05682 793 aaKnown RBP20.4■□□□□ 0.86
CLK3P2-201ENST00000427566 NFIXQ14938 502 aa20.4■□□□□ 0.86
CLK3P2-201ENST00000427566 KIAA1551Q9HCM1 1747 aa20.39■□□□□ 0.86
CLK3P2-201ENST00000427566 NBPF26B4DH59 902 aa20.39■□□□□ 0.85
CLK3P2-201ENST00000427566 TM4SF1P30408 202 aa20.39■□□□□ 0.85
CLK3P2-201ENST00000427566 NBPF10Q6P3W6 841 aaKnown RBP20.39■□□□□ 0.85
CLK3P2-201ENST00000427566 NBPF15Q8N660 670 aa20.39■□□□□ 0.85
CLK3P2-201ENST00000427566 POLRMTO00411 1230 aaKnown RBP20.38■□□□□ 0.85
CLK3P2-201ENST00000427566 MYL6BP14649 208 aa20.38■□□□□ 0.85
CLK3P2-201ENST00000427566 EIF2S2P20042 333 aaKnown RBP20.38■□□□□ 0.85
CLK3P2-201ENST00000427566 C10orf71Q711Q0 1435 aa20.38■□□□□ 0.85
CLK3P2-201ENST00000427566 ZNF521Q96K83 1311 aa20.38■□□□□ 0.85
CLK3P2-201ENST00000427566 WDR63Q8IWG1 891 aa20.37■□□□□ 0.85
CLK3P2-201ENST00000427566 A0A0G2JLW4 131 aa20.37■□□□□ 0.85
CLK3P2-201ENST00000427566 SERPINB2P05120 415 aa20.37■□□□□ 0.85
CLK3P2-201ENST00000427566 YBX3P16989 372 aaKnown RBP eCLIP20.37■□□□□ 0.85
CLK3P2-201ENST00000427566 TBC1D9BQ66K14 1250 aa20.37■□□□□ 0.85
CLK3P2-201ENST00000427566 NECTIN2Q92692 538 aa20.37■□□□□ 0.85
CLK3P2-201ENST00000427566 NUP98P52948 1817 aa20.36■□□□□ 0.85
CLK3P2-201ENST00000427566 CAMTA2O94983 1202 aa20.36■□□□□ 0.85
CLK3P2-201ENST00000427566 YY1P25490 414 aa20.36■□□□□ 0.85
CLK3P2-201ENST00000427566 NRXN2Q9P2S2 1712 aa20.36■□□□□ 0.85
CLK3P2-201ENST00000427566 IL16Q14005 1332 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms