RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 HMOX1P09601 288 aa7.67□□□□□ -1.18
HERPUD2-204ENST00000426180 RXRBP28702 533 aa7.67□□□□□ -1.18
HERPUD2-204ENST00000426180 RBM6P78332 1123 aaKnown RBP7.67□□□□□ -1.18
HERPUD2-204ENST00000426180 MRPL50Q8N5N7 158 aaKnown RBP7.67□□□□□ -1.18
HERPUD2-204ENST00000426180 DDX27Q96GQ7 796 aaKnown RBP7.67□□□□□ -1.18
HERPUD2-204ENST00000426180 CFAP53Q96M91 514 aa7.67□□□□□ -1.18
HERPUD2-204ENST00000426180 IGSF1Q8N6C5 1336 aa7.67□□□□□ -1.18
HERPUD2-204ENST00000426180 DISP2A7MBM2 1401 aa7.67□□□□□ -1.18
HERPUD2-204ENST00000426180 NCAPD2Q15021 1401 aa7.67□□□□□ -1.18
HERPUD2-204ENST00000426180 MEGF6O75095 1541 aa7.67□□□□□ -1.18
HERPUD2-204ENST00000426180 RGPD2P0DJD1 1756 aa7.66□□□□□ -1.18
HERPUD2-204ENST00000426180 U2SURPO15042 1029 aaKnown RBP7.66□□□□□ -1.18
HERPUD2-204ENST00000426180 ONECUT3O60422 494 aaPredicted RBP7.66□□□□□ -1.18
HERPUD2-204ENST00000426180 SULT6B1Q6IMI4 303 aa7.66□□□□□ -1.18
HERPUD2-204ENST00000426180 THSD4Q6ZMP0 1018 aa7.66□□□□□ -1.18
HERPUD2-204ENST00000426180 BARGINQ6ZT62 677 aa7.66□□□□□ -1.18
HERPUD2-204ENST00000426180 SEPT12Q8IYM1 358 aa7.66□□□□□ -1.18
HERPUD2-204ENST00000426180 WNT2BQ93097 391 aa7.66□□□□□ -1.18
HERPUD2-204ENST00000426180 ADAM33Q9BZ11 813 aa7.66□□□□□ -1.18
HERPUD2-204ENST00000426180 RGS12O14924 1447 aa7.66□□□□□ -1.18
HERPUD2-204ENST00000426180 RGPD1P0DJD0 1748 aa7.65□□□□□ -1.18
HERPUD2-204ENST00000426180 U2AF1L5P0DN76 240 aaPredicted RBP7.65□□□□□ -1.18
HERPUD2-204ENST00000426180 U2AF1Q01081 240 aaKnown RBP eCLIP7.65□□□□□ -1.18
HERPUD2-204ENST00000426180 THRAP3Q9Y2W1 955 aaKnown RBP7.65□□□□□ -1.18
HERPUD2-204ENST00000426180 THSD7AQ9UPZ6 1657 aa7.64□□□□□ -1.19
HERPUD2-204ENST00000426180 IL2RBP14784 551 aa7.64□□□□□ -1.19
HERPUD2-204ENST00000426180 FAM182BQ5T319 152 aa7.64□□□□□ -1.19
HERPUD2-204ENST00000426180 IFFO2Q5TF58 517 aa7.64□□□□□ -1.19
HERPUD2-204ENST00000426180 ILDR2Q71H61 639 aa7.64□□□□□ -1.19
HERPUD2-204ENST00000426180 NBPF3Q9H094 633 aa7.64□□□□□ -1.19
HERPUD2-204ENST00000426180 RSPH6AQ9H0K4 717 aa7.64□□□□□ -1.19
HERPUD2-204ENST00000426180 MRS2Q9HD23 443 aa7.64□□□□□ -1.19
HERPUD2-204ENST00000426180 OVOS2A0A0G2JMS6 1433 aa7.63□□□□□ -1.19
HERPUD2-204ENST00000426180 KDRP35968 1356 aa7.63□□□□□ -1.19
HERPUD2-204ENST00000426180 A0A0G2JS52 829 aa7.63□□□□□ -1.19
HERPUD2-204ENST00000426180 TATP17735 454 aaPredicted RBP7.63□□□□□ -1.19
HERPUD2-204ENST00000426180 MYT1Q01538 1121 aa7.63□□□□□ -1.19
HERPUD2-204ENST00000426180 MARCH10Q8NA82 808 aaPredicted RBP7.63□□□□□ -1.19
HERPUD2-204ENST00000426180 PNISRQ8TF01 805 aaKnown RBP7.63□□□□□ -1.19
HERPUD2-204ENST00000426180 RAPGEF4Q8WZA2 1011 aa7.63□□□□□ -1.19
HERPUD2-204ENST00000426180 PHACTR3Q96KR7 559 aa7.63□□□□□ -1.19
HERPUD2-204ENST00000426180 ADAMTS8Q9UP79 889 aa7.63□□□□□ -1.19
HERPUD2-204ENST00000426180 NUDCQ9Y266 331 aa7.63□□□□□ -1.19
HERPUD2-204ENST00000426180 PRKAR2BP31323 418 aa7.62□□□□□ -1.19
HERPUD2-204ENST00000426180 DDB1Q16531 1140 aa7.62□□□□□ -1.19
HERPUD2-204ENST00000426180 CCDC146Q8IYE0 955 aa7.62□□□□□ -1.19
HERPUD2-204ENST00000426180 ZCRB1Q8TBF4 217 aaKnown RBP7.62□□□□□ -1.19
HERPUD2-204ENST00000426180 DDX54Q8TDD1 881 aaKnown RBP7.62□□□□□ -1.19
HERPUD2-204ENST00000426180 PLEKHF1Q96S99 279 aa7.62□□□□□ -1.19
HERPUD2-204ENST00000426180 LRRC37A3O60309 1634 aa7.62□□□□□ -1.19
HERPUD2-204ENST00000426180 WNK3Q9BYP7 1800 aa7.62□□□□□ -1.19
HERPUD2-204ENST00000426180 SENP3-EIF4A1A0A087X0R7 540 aa7.61□□□□□ -1.19
HERPUD2-204ENST00000426180 EXOC5O00471 708 aa7.61□□□□□ -1.19
HERPUD2-204ENST00000426180 CYP27B1O15528 508 aa7.61□□□□□ -1.19
HERPUD2-204ENST00000426180 RGS20O76081 388 aa7.61□□□□□ -1.19
HERPUD2-204ENST00000426180 FCHSD2O94868 740 aa7.61□□□□□ -1.19
HERPUD2-204ENST00000426180 MFSD10Q14728 455 aa7.61□□□□□ -1.19
HERPUD2-204ENST00000426180 MTHFSDQ2M296 383 aaKnown RBP7.61□□□□□ -1.19
HERPUD2-204ENST00000426180 CDCA7Q9BWT1 371 aaPredicted RBP7.61□□□□□ -1.19
HERPUD2-204ENST00000426180 TNS2Q63HR2 1409 aa7.61□□□□□ -1.19
HERPUD2-204ENST00000426180 CCER2I3L3R5 266 aa7.6□□□□□ -1.19
HERPUD2-204ENST00000426180 PDE3BQ13370 1112 aa7.6□□□□□ -1.19
HERPUD2-204ENST00000426180 WDR43Q15061 677 aaKnown RBP eCLIP7.6□□□□□ -1.19
HERPUD2-204ENST00000426180 ZNF530Q6P9A1 599 aaPredicted RBP7.6□□□□□ -1.19
HERPUD2-204ENST00000426180 PTF1AQ7RTS3 328 aa7.6□□□□□ -1.19
HERPUD2-204ENST00000426180 KRT27Q7Z3Y8 459 aa7.6□□□□□ -1.19
HERPUD2-204ENST00000426180 FAM9BQ8IZU0 186 aa7.6□□□□□ -1.19
HERPUD2-204ENST00000426180 EMILIN3Q9NT22 766 aa7.6□□□□□ -1.19
HERPUD2-204ENST00000426180 PCDHGA10Q9Y5H3 936 aa7.6□□□□□ -1.19
HERPUD2-204ENST00000426180 PARP4Q9UKK3 1724 aaKnown RBP7.6□□□□□ -1.19
HERPUD2-204ENST00000426180 SHANK3Q9BYB0 1731 aa7.59□□□□□ -1.19
HERPUD2-204ENST00000426180 PPP1R3GB7ZBB8 358 aa7.59□□□□□ -1.19
HERPUD2-204ENST00000426180 PHKG2P15735 406 aa7.59□□□□□ -1.19
HERPUD2-204ENST00000426180 PLEKHO1Q53GL0 409 aaPredicted RBP7.59□□□□□ -1.19
HERPUD2-204ENST00000426180 RABGEF1Q9UJ41 708 aa7.59□□□□□ -1.19
HERPUD2-204ENST00000426180 SPG7Q9UQ90 795 aa7.59□□□□□ -1.19
HERPUD2-204ENST00000426180 BRWD3Q6RI45 1802 aa7.59□□□□□ -1.19
HERPUD2-204ENST00000426180 PKD1L3Q7Z443 1732 aa7.58□□□□□ -1.2
HERPUD2-204ENST00000426180 PCDH11XQ9BZA7 1347 aa7.58□□□□□ -1.2
HERPUD2-204ENST00000426180 PCDH11YQ9BZA8 1340 aa7.58□□□□□ -1.2
HERPUD2-204ENST00000426180 AMOTQ4VCS5 1084 aa7.58□□□□□ -1.2
HERPUD2-204ENST00000426180 RRP7AQ9Y3A4 280 aaKnown RBP7.58□□□□□ -1.2
HERPUD2-204ENST00000426180 KCNQ2O43526 872 aa7.57□□□□□ -1.2
HERPUD2-204ENST00000426180 MPRIPQ6WCQ1 1025 aa7.57□□□□□ -1.2
HERPUD2-204ENST00000426180 IFNL2Q8IZJ0 200 aa7.57□□□□□ -1.2
HERPUD2-204ENST00000426180 FBXW7Q969H0 707 aa7.57□□□□□ -1.2
HERPUD2-204ENST00000426180 RUNDC1Q96C34 613 aa7.57□□□□□ -1.2
HERPUD2-204ENST00000426180 ACSBG1Q96GR2 724 aa7.57□□□□□ -1.2
HERPUD2-204ENST00000426180 LGR6Q9HBX8 967 aa7.57□□□□□ -1.2
HERPUD2-204ENST00000426180 KDM6AO15550 1401 aaPredicted RBP7.57□□□□□ -1.2
HERPUD2-204ENST00000426180 APAF1O14727 1248 aa7.56□□□□□ -1.2
HERPUD2-204ENST00000426180 PHF14O94880 888 aa7.56□□□□□ -1.2
HERPUD2-204ENST00000426180 COL9A1P20849 921 aa7.56□□□□□ -1.2
HERPUD2-204ENST00000426180 DCTN1Q14203 1278 aa7.56□□□□□ -1.2
HERPUD2-204ENST00000426180 NEUROD2Q15784 382 aa7.56□□□□□ -1.2
HERPUD2-204ENST00000426180 NFE2L2Q16236 605 aa7.56□□□□□ -1.2
HERPUD2-204ENST00000426180 PROX2Q3B8N5 592 aa7.56□□□□□ -1.2
HERPUD2-204ENST00000426180 AKAP4Q5JQC9 854 aa7.56□□□□□ -1.2
HERPUD2-204ENST00000426180 TYW1BQ6NUM6 668 aa7.56□□□□□ -1.2
HERPUD2-204ENST00000426180 MCM10Q7L590 875 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms