RNA–Protein interactions for RNA: ENST00000424192.6

LMO3-206, Transcript of LIM domain only 3, humanhuman

TSL 1 (best)

Gene LMO3, Length 983 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-206ENST00000424192 CASZ1Q86V15 1759 aa15.27■□□□□ 0.04
LMO3-206ENST00000424192 R3HDM1Q15032 1099 aaKnown RBP15.27■□□□□ 0.04
LMO3-206ENST00000424192 RC3H1Q5TC82 1133 aaKnown RBP15.27■□□□□ 0.04
LMO3-206ENST00000424192 MIER1Q8N108 512 aa15.27■□□□□ 0.04
LMO3-206ENST00000424192 THUMPD2Q9BTF0 503 aaKnown RBP15.27■□□□□ 0.04
LMO3-206ENST00000424192 TFCP2L1Q9NZI6 479 aa15.27■□□□□ 0.04
LMO3-206ENST00000424192 TSPYL4Q9UJ04 414 aa15.27■□□□□ 0.04
LMO3-206ENST00000424192 STARD3NLO95772 234 aa15.26■□□□□ 0.03
LMO3-206ENST00000424192 SSFA2P28290 1259 aa15.26■□□□□ 0.03
LMO3-206ENST00000424192 ITPK1Q13572 414 aa15.26■□□□□ 0.03
LMO3-206ENST00000424192 ZNF827Q17R98 1081 aa15.26■□□□□ 0.03
LMO3-206ENST00000424192 LINC00116Q8NCU8 138 aa15.26■□□□□ 0.03
LMO3-206ENST00000424192 ZNF496Q96IT1 587 aaPredicted RBP15.26■□□□□ 0.03
LMO3-206ENST00000424192 IFT57Q9NWB7 429 aa15.26■□□□□ 0.03
LMO3-206ENST00000424192 TUBGCP6Q96RT7 1819 aa15.26■□□□□ 0.03
LMO3-206ENST00000424192 UBR3Q6ZT12 1888 aa15.25■□□□□ 0.03
LMO3-206ENST00000424192 IL16Q14005 1332 aa15.25■□□□□ 0.03
LMO3-206ENST00000424192 PITPNM1O00562 1244 aa15.25■□□□□ 0.03
LMO3-206ENST00000424192 GNAI1P63096 354 aa15.25■□□□□ 0.03
LMO3-206ENST00000424192 CFAP44Q96MT7 982 aa15.25■□□□□ 0.03
LMO3-206ENST00000424192 SLC4A9Q96Q91 983 aa15.25■□□□□ 0.03
LMO3-206ENST00000424192 SNRPA1P09661 255 aaKnown RBP15.24■□□□□ 0.03
LMO3-206ENST00000424192 KCNQ4P56696 695 aa15.24■□□□□ 0.03
LMO3-206ENST00000424192 SPDYE1Q8NFV5 336 aaPredicted RBP15.24■□□□□ 0.03
LMO3-206ENST00000424192 PSDA5PKW4 1024 aaPredicted RBP15.23■□□□□ 0.03
LMO3-206ENST00000424192 GNPATO15228 680 aa15.23■□□□□ 0.03
LMO3-206ENST00000424192 CRKLP46109 303 aaKnown RBP15.23■□□□□ 0.03
LMO3-206ENST00000424192 DNAJC10Q8IXB1 793 aa15.23■□□□□ 0.03
LMO3-206ENST00000424192 SLC16A10Q8TF71 515 aa15.23■□□□□ 0.03
LMO3-206ENST00000424192 CCDC87Q9NVE4 849 aa15.23■□□□□ 0.03
LMO3-206ENST00000424192 RTCBQ9Y3I0 505 aaKnown RBP15.23■□□□□ 0.03
LMO3-206ENST00000424192 LRP5O75197 1615 aa15.23■□□□□ 0.03
LMO3-206ENST00000424192 PNPLA7Q6ZV29 1317 aa15.22■□□□□ 0.03
LMO3-206ENST00000424192 CHL1O00533 1208 aa15.22■□□□□ 0.03
LMO3-206ENST00000424192 CYP19A1P11511 503 aaPredicted RBP15.22■□□□□ 0.03
LMO3-206ENST00000424192 WWC1Q8IX03 1113 aa15.22■□□□□ 0.03
LMO3-206ENST00000424192 HOXB7P09629 217 aa15.21■□□□□ 0.03
LMO3-206ENST00000424192 EIF4A1P60842 406 aaKnown RBP15.21■□□□□ 0.03
LMO3-206ENST00000424192 WDR63Q8IWG1 891 aa15.21■□□□□ 0.03
LMO3-206ENST00000424192 CHMP4AQ9BY43 222 aa15.21■□□□□ 0.03
LMO3-206ENST00000424192 SOS1Q07889 1333 aaPredicted RBP15.2■□□□□ 0.02
LMO3-206ENST00000424192 ERBB4Q15303 1308 aa15.2■□□□□ 0.02
LMO3-206ENST00000424192 KCNQ3O43525 872 aa15.2■□□□□ 0.02
LMO3-206ENST00000424192 RPS6KA4O75676 772 aa15.2■□□□□ 0.02
LMO3-206ENST00000424192 ZNF853P0CG23 659 aa15.2■□□□□ 0.02
LMO3-206ENST00000424192 NPM2Q86SE8 214 aaKnown RBP15.2■□□□□ 0.02
LMO3-206ENST00000424192 LAS1LQ9Y4W2 734 aaKnown RBP15.2■□□□□ 0.02
LMO3-206ENST00000424192 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.19■□□□□ 0.02
LMO3-206ENST00000424192 MTFR1LQ9H019 292 aa15.19■□□□□ 0.02
LMO3-206ENST00000424192 MIS18AQ9NYP9 233 aa15.19■□□□□ 0.02
LMO3-206ENST00000424192 COL15A1P39059 1388 aa15.19■□□□□ 0.02
LMO3-206ENST00000424192 C4AP0C0L4 1744 aa15.18■□□□□ 0.02
LMO3-206ENST00000424192 A0A087WZG4 1122 aa15.18■□□□□ 0.02
LMO3-206ENST00000424192 GIGYF1O75420 1035 aaPredicted RBP15.18■□□□□ 0.02
LMO3-206ENST00000424192 MYH16Q9H6N6 1097 aa15.18■□□□□ 0.02
LMO3-206ENST00000424192 MBIPQ9NS73 344 aa15.18■□□□□ 0.02
LMO3-206ENST00000424192 CLEC11AQ9Y240 323 aa15.18■□□□□ 0.02
LMO3-206ENST00000424192 MYH14Q7Z406 1995 aaKnown RBP15.17■□□□□ 0.02
LMO3-206ENST00000424192 PHF14O94880 888 aa15.17■□□□□ 0.02
LMO3-206ENST00000424192 IL6STP40189 918 aaPredicted RBP15.17■□□□□ 0.02
LMO3-206ENST00000424192 TRAPPC3LQ5T215 181 aa15.17■□□□□ 0.02
LMO3-206ENST00000424192 INTS5Q6P9B9 1019 aaKnown RBP15.17■□□□□ 0.02
LMO3-206ENST00000424192 SPON1Q9HCB6 807 aa15.17■□□□□ 0.02
LMO3-206ENST00000424192 ZBTB1Q9Y2K1 713 aa15.17■□□□□ 0.02
LMO3-206ENST00000424192 SCN7AQ01118 1682 aa15.16■□□□□ 0.02
LMO3-206ENST00000424192 COL23A1Q86Y22 540 aaPredicted RBP15.16■□□□□ 0.02
LMO3-206ENST00000424192 COL24A1Q17RW2 1714 aa15.16■□□□□ 0.02
LMO3-206ENST00000424192 ZNF521Q96K83 1311 aa15.16■□□□□ 0.02
LMO3-206ENST00000424192 RFC4P35249 363 aa15.15■□□□□ 0.02
LMO3-206ENST00000424192 POLD1P28340 1107 aa15.14■□□□□ 0.01
LMO3-206ENST00000424192 FBXO3Q9UK99 471 aa15.14■□□□□ 0.01
LMO3-206ENST00000424192 SALL2Q9Y467 1007 aaPredicted RBP15.14■□□□□ 0.01
LMO3-206ENST00000424192 USP42Q9H9J4 1324 aaKnown RBP15.14■□□□□ 0.01
LMO3-206ENST00000424192 FANCIQ9NVI1 1328 aa15.14■□□□□ 0.01
LMO3-206ENST00000424192 E9PSI1 815 aa15.13■□□□□ 0.01
LMO3-206ENST00000424192 RGL2O15211 777 aa15.13■□□□□ 0.01
LMO3-206ENST00000424192 ZPR1O75312 459 aa15.13■□□□□ 0.01
LMO3-206ENST00000424192 CANXP27824 592 aaKnown RBP15.13■□□□□ 0.01
LMO3-206ENST00000424192 EIF5P55010 431 aaKnown RBP15.13■□□□□ 0.01
LMO3-206ENST00000424192 GOLGA2Q08379 1002 aa15.13■□□□□ 0.01
LMO3-206ENST00000424192 USP16Q9Y5T5 823 aa15.13■□□□□ 0.01
LMO3-206ENST00000424192 BCORQ6W2J9 1755 aa15.12■□□□□ 0.01
LMO3-206ENST00000424192 ZBTB7AO95365 584 aa15.12■□□□□ 0.01
LMO3-206ENST00000424192 HDGFL1Q5TGJ6 251 aa15.12■□□□□ 0.01
LMO3-206ENST00000424192 ARHGEF1Q92888 912 aaKnown RBP15.12■□□□□ 0.01
LMO3-206ENST00000424192 PRAMEF22A3QJZ6 481 aa15.11■□□□□ 0.01
LMO3-206ENST00000424192 DUSP27Q5VZP5 1158 aa15.11■□□□□ 0.01
LMO3-206ENST00000424192 AMIGO3Q86WK7 504 aa15.11■□□□□ 0.01
LMO3-206ENST00000424192 NLGN1Q8N2Q7 840 aa15.11■□□□□ 0.01
LMO3-206ENST00000424192 NARFQ9UHQ1 456 aa15.11■□□□□ 0.01
LMO3-206ENST00000424192 A1BGP04217 495 aa15.1■□□□□ 0.01
LMO3-206ENST00000424192 TSR2Q969E8 191 aaKnown RBP15.1■□□□□ 0.01
LMO3-206ENST00000424192 PDGFDQ9GZP0 370 aaPredicted RBP15.1■□□□□ 0.01
LMO3-206ENST00000424192 ZNF652Q9Y2D9 606 aa15.1■□□□□ 0.01
LMO3-206ENST00000424192 ZNF330Q9Y3S2 320 aaPredicted RBP15.1■□□□□ 0.01
LMO3-206ENST00000424192 SENP3-EIF4A1A0A087X0R7 540 aa15.09■□□□□ 0.01
LMO3-206ENST00000424192 HNRNPUQ00839 825 aaKnown RBP eCLIP15.09■□□□□ 0.01
LMO3-206ENST00000424192 KIF6Q6ZMV9 814 aa15.09■□□□□ 0.01
LMO3-206ENST00000424192 DBF4Q9UBU7 674 aaPredicted RBP15.09■□□□□ 0.01
LMO3-206ENST00000424192 NBPF26B4DH59 902 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms