RNA–Protein interactions for RNA: ENST00000423960.1

FOXN4-203, Transcript of forkhead box N4, humanhuman

TSL 1 (best)

Gene FOXN4, Length 1,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-203ENST00000423960 USP16Q9Y5T5 823 aa22.06■■□□□ 1.12
FOXN4-203ENST00000423960 UBR2Q8IWV8 1755 aa22.06■■□□□ 1.12
FOXN4-203ENST00000423960 KDM3BQ7LBC6 1761 aa22.05■■□□□ 1.12
FOXN4-203ENST00000423960 MSH5O43196 834 aa22.05■■□□□ 1.12
FOXN4-203ENST00000423960 CRKLP46109 303 aaKnown RBP22.05■■□□□ 1.12
FOXN4-203ENST00000423960 AK7Q96M32 723 aa22.05■■□□□ 1.12
FOXN4-203ENST00000423960 ZNF831Q5JPB2 1677 aa22.04■■□□□ 1.12
FOXN4-203ENST00000423960 E9PSI1 815 aa22.04■■□□□ 1.12
FOXN4-203ENST00000423960 KRT24Q2M2I5 525 aa22.04■■□□□ 1.12
FOXN4-203ENST00000423960 CNTNAP4Q9C0A0 1308 aa22.04■■□□□ 1.12
FOXN4-203ENST00000423960 INTS5Q6P9B9 1019 aaKnown RBP22.03■■□□□ 1.12
FOXN4-203ENST00000423960 CCDC87Q9NVE4 849 aa22.03■■□□□ 1.12
FOXN4-203ENST00000423960 FANCIQ9NVI1 1328 aa22.03■■□□□ 1.12
FOXN4-203ENST00000423960 SLFN5Q08AF3 891 aa22.02■■□□□ 1.12
FOXN4-203ENST00000423960 COL23A1Q86Y22 540 aaPredicted RBP22.02■■□□□ 1.12
FOXN4-203ENST00000423960 SLC16A10Q8TF71 515 aa22.02■■□□□ 1.12
FOXN4-203ENST00000423960 ARXQ96QS3 562 aa22.02■■□□□ 1.12
FOXN4-203ENST00000423960 FHDC1Q9C0D6 1143 aaPredicted RBP22.02■■□□□ 1.12
FOXN4-203ENST00000423960 GNPATO15228 680 aa22.01■■□□□ 1.11
FOXN4-203ENST00000423960 DUSP27Q5VZP5 1158 aa22.01■■□□□ 1.11
FOXN4-203ENST00000423960 C8orf58Q8NAV2 365 aa22.01■■□□□ 1.11
FOXN4-203ENST00000423960 CDCA7LQ96GN5 454 aa22.01■■□□□ 1.11
FOXN4-203ENST00000423960 ELL2O00472 640 aaPredicted RBP22■■□□□ 1.11
FOXN4-203ENST00000423960 RPS6KA4O75676 772 aa22■■□□□ 1.11
FOXN4-203ENST00000423960 A1BGP04217 495 aa22■■□□□ 1.11
FOXN4-203ENST00000423960 EIF2S2P20042 333 aaKnown RBP22■■□□□ 1.11
FOXN4-203ENST00000423960 RTCBQ9Y3I0 505 aaKnown RBP22■■□□□ 1.11
FOXN4-203ENST00000423960 C5P01031 1676 aa22■■□□□ 1.11
FOXN4-203ENST00000423960 HOXB7P09629 217 aa21.99■■□□□ 1.11
FOXN4-203ENST00000423960 C4BP0C0L5 1744 aa21.99■■□□□ 1.11
FOXN4-203ENST00000423960 TJP1Q07157 1748 aa21.99■■□□□ 1.11
FOXN4-203ENST00000423960 ZBED9Q6R2W3 1325 aa21.99■■□□□ 1.11
FOXN4-203ENST00000423960 CICQ96RK0 1608 aaPredicted RBP21.98■■□□□ 1.11
FOXN4-203ENST00000423960 CANXP27824 592 aaKnown RBP21.98■■□□□ 1.11
FOXN4-203ENST00000423960 SMIM5Q71RC9 77 aa21.98■■□□□ 1.11
FOXN4-203ENST00000423960 FLAD1Q8NFF5 587 aa21.98■■□□□ 1.11
FOXN4-203ENST00000423960 SYT17Q9BSW7 474 aa21.98■■□□□ 1.11
FOXN4-203ENST00000423960 ZBTB1Q9Y2K1 713 aa21.98■■□□□ 1.11
FOXN4-203ENST00000423960 TAF1LQ8IZX4 1826 aa21.98■■□□□ 1.11
FOXN4-203ENST00000423960 SSFA2P28290 1259 aa21.97■■□□□ 1.11
FOXN4-203ENST00000423960 POLD1P28340 1107 aa21.97■■□□□ 1.11
FOXN4-203ENST00000423960 EXOSC9Q06265 439 aaKnown RBP21.97■■□□□ 1.11
FOXN4-203ENST00000423960 MSL1Q68DK7 614 aa21.97■■□□□ 1.11
FOXN4-203ENST00000423960 AMIGO3Q86WK7 504 aa21.97■■□□□ 1.11
FOXN4-203ENST00000423960 TRMT2AQ8IZ69 625 aaKnown RBP21.97■■□□□ 1.11
FOXN4-203ENST00000423960 TSPYL6Q8N831 410 aa21.97■■□□□ 1.11
FOXN4-203ENST00000423960 SOS1Q07889 1333 aaPredicted RBP21.97■■□□□ 1.11
FOXN4-203ENST00000423960 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.96■■□□□ 1.11
FOXN4-203ENST00000423960 PHF14O94880 888 aa21.96■■□□□ 1.11
FOXN4-203ENST00000423960 TRAPPC3LQ5T215 181 aa21.96■■□□□ 1.11
FOXN4-203ENST00000423960 KLHL34Q8N239 644 aa21.96■■□□□ 1.11
FOXN4-203ENST00000423960 NECTIN2Q92692 538 aa21.96■■□□□ 1.11
FOXN4-203ENST00000423960 TUBGCP6Q96RT7 1819 aa21.96■■□□□ 1.11
FOXN4-203ENST00000423960 COL5A3P25940 1745 aaPredicted RBP21.95■■□□□ 1.1
FOXN4-203ENST00000423960 DCAF8L1A6NGE4 600 aa21.95■■□□□ 1.1
FOXN4-203ENST00000423960 TWISTNBQ3B726 338 aaPredicted RBP21.95■■□□□ 1.1
FOXN4-203ENST00000423960 HDGFL1Q5TGJ6 251 aa21.95■■□□□ 1.1
FOXN4-203ENST00000423960 CHMP4AQ9BY43 222 aa21.95■■□□□ 1.1
FOXN4-203ENST00000423960 QSER1Q2KHR3 1735 aa21.94■■□□□ 1.1
FOXN4-203ENST00000423960 NBPF26B4DH59 902 aa21.94■■□□□ 1.1
FOXN4-203ENST00000423960 ADRA2BP18089 450 aa21.94■■□□□ 1.1
FOXN4-203ENST00000423960 IL6STP40189 918 aaPredicted RBP21.94■■□□□ 1.1
FOXN4-203ENST00000423960 PIP4K2AP48426 406 aaPredicted RBP21.94■■□□□ 1.1
FOXN4-203ENST00000423960 NBPF10Q6P3W6 841 aaKnown RBP21.94■■□□□ 1.1
FOXN4-203ENST00000423960 NBPF15Q8N660 670 aa21.94■■□□□ 1.1
FOXN4-203ENST00000423960 EIF5P55010 431 aaKnown RBP21.93■■□□□ 1.1
FOXN4-203ENST00000423960 ERBB4Q15303 1308 aa21.93■■□□□ 1.1
FOXN4-203ENST00000423960 NPM2Q86SE8 214 aaKnown RBP21.93■■□□□ 1.1
FOXN4-203ENST00000423960 ARHGEF1Q92888 912 aaKnown RBP21.93■■□□□ 1.1
FOXN4-203ENST00000423960 VAMP4O75379 141 aa21.92■■□□□ 1.1
FOXN4-203ENST00000423960 ZNF330Q9Y3S2 320 aaPredicted RBP21.92■■□□□ 1.1
FOXN4-203ENST00000423960 MYH14Q7Z406 1995 aaKnown RBP21.91■■□□□ 1.1
FOXN4-203ENST00000423960 A0A087WZG4 1122 aa21.91■■□□□ 1.1
FOXN4-203ENST00000423960 RFC4P35249 363 aa21.91■■□□□ 1.1
FOXN4-203ENST00000423960 CCDC30Q5VVM6 783 aa21.91■■□□□ 1.1
FOXN4-203ENST00000423960 YTHDC1Q96MU7 727 aaKnown RBP21.91■■□□□ 1.1
FOXN4-203ENST00000423960 MYL6BP14649 208 aa21.9■■□□□ 1.1
FOXN4-203ENST00000423960 PDIA6Q15084 440 aa21.9■■□□□ 1.1
FOXN4-203ENST00000423960 DDX21Q9NR30 783 aaKnown RBP eCLIP21.89■■□□□ 1.09
FOXN4-203ENST00000423960 CHPF2Q9P2E5 772 aa21.89■■□□□ 1.09
FOXN4-203ENST00000423960 DBF4Q9UBU7 674 aaPredicted RBP21.89■■□□□ 1.09
FOXN4-203ENST00000423960 COL15A1P39059 1388 aa21.88■■□□□ 1.09
FOXN4-203ENST00000423960 ZPR1O75312 459 aa21.87■■□□□ 1.09
FOXN4-203ENST00000423960 ANXA1P04083 346 aa21.87■■□□□ 1.09
FOXN4-203ENST00000423960 PROSER3Q2NL68 480 aa21.87■■□□□ 1.09
FOXN4-203ENST00000423960 LAMB4A4D0S4 1761 aa21.87■■□□□ 1.09
FOXN4-203ENST00000423960 UBR3Q6ZT12 1888 aa21.86■■□□□ 1.09
FOXN4-203ENST00000423960 HYPKQ9NX55 129 aa21.86■■□□□ 1.09
FOXN4-203ENST00000423960 TBC1D2BQ9UPU7 963 aa21.86■■□□□ 1.09
FOXN4-203ENST00000423960 TCERG1O14776 1098 aaKnown RBP21.85■■□□□ 1.09
FOXN4-203ENST00000423960 LRP10Q7Z4F1 713 aa21.85■■□□□ 1.09
FOXN4-203ENST00000423960 DZIP3Q86Y13 1208 aaKnown RBP21.85■■□□□ 1.09
FOXN4-203ENST00000423960 NLGN2Q8NFZ4 835 aa21.85■■□□□ 1.09
FOXN4-203ENST00000423960 STK31Q9BXU1 1019 aa21.85■■□□□ 1.09
FOXN4-203ENST00000423960 SRP68Q9UHB9 627 aaKnown RBP21.85■■□□□ 1.09
FOXN4-203ENST00000423960 NARFQ9UHQ1 456 aa21.85■■□□□ 1.09
FOXN4-203ENST00000423960 USP42Q9H9J4 1324 aaKnown RBP21.83■■□□□ 1.09
FOXN4-203ENST00000423960 CT47B1P0C2W7 299 aaPredicted RBP21.83■■□□□ 1.09
FOXN4-203ENST00000423960 YY1P25490 414 aa21.83■■□□□ 1.09
FOXN4-203ENST00000423960 USPL1Q5W0Q7 1092 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms