RNA–Protein interactions for RNA: ENST00000423540.6

CXorf40A-205, Transcript of chromosome X open reading frame 40A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXorf40A, Length 1,208 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXorf40A-205ENST00000423540 CCDC184Q52MB2 194 aa18.2■□□□□ 0.5
CXorf40A-205ENST00000423540 FMNL2Q96PY5 1086 aa18.19■□□□□ 0.5
CXorf40A-205ENST00000423540 ADAMTS8Q9UP79 889 aa18.19■□□□□ 0.5
CXorf40A-205ENST00000423540 RRP7AQ9Y3A4 280 aaKnown RBP18.19■□□□□ 0.5
CXorf40A-205ENST00000423540 FKBP8Q14318 412 aa18.18■□□□□ 0.5
CXorf40A-205ENST00000423540 TAF7Q15545 349 aaPredicted RBP18.18■□□□□ 0.5
CXorf40A-205ENST00000423540 PNNQ9H307 717 aaKnown RBP18.18■□□□□ 0.5
CXorf40A-205ENST00000423540 USP42Q9H9J4 1324 aaKnown RBP18.18■□□□□ 0.5
CXorf40A-205ENST00000423540 A1BGP04217 495 aa18.17■□□□□ 0.5
CXorf40A-205ENST00000423540 USP16Q9Y5T5 823 aa18.17■□□□□ 0.5
CXorf40A-205ENST00000423540 STARD3NLO95772 234 aa18.16■□□□□ 0.5
CXorf40A-205ENST00000423540 TMPOP42166 694 aaKnown RBP18.16■□□□□ 0.5
CXorf40A-205ENST00000423540 PIP4K2AP48426 406 aaPredicted RBP18.16■□□□□ 0.5
CXorf40A-205ENST00000423540 RIPK4P57078 832 aa18.16■□□□□ 0.5
CXorf40A-205ENST00000423540 WDR43Q15061 677 aaKnown RBP eCLIP18.16■□□□□ 0.5
CXorf40A-205ENST00000423540 USPL1Q5W0Q7 1092 aa18.16■□□□□ 0.5
CXorf40A-205ENST00000423540 NLGN1Q8N2Q7 840 aa18.16■□□□□ 0.5
CXorf40A-205ENST00000423540 COL15A1P39059 1388 aa18.16■□□□□ 0.5
CXorf40A-205ENST00000423540 KDM3BQ7LBC6 1761 aa18.15■□□□□ 0.5
CXorf40A-205ENST00000423540 NEUROD2Q15784 382 aa18.15■□□□□ 0.5
CXorf40A-205ENST00000423540 PELP1Q8IZL8 1130 aaKnown RBP18.15■□□□□ 0.5
CXorf40A-205ENST00000423540 BCL2L12Q9HB09 334 aa18.15■□□□□ 0.5
CXorf40A-205ENST00000423540 CD2APQ9Y5K6 639 aa18.15■□□□□ 0.5
CXorf40A-205ENST00000423540 EIF5P55010 431 aaKnown RBP18.14■□□□□ 0.49
CXorf40A-205ENST00000423540 DDR1Q08345 913 aa18.14■□□□□ 0.49
CXorf40A-205ENST00000423540 WWC3Q9ULE0 1092 aa18.14■□□□□ 0.49
CXorf40A-205ENST00000423540 DCAF8L1A6NGE4 600 aa18.13■□□□□ 0.49
CXorf40A-205ENST00000423540 YBX3P16989 372 aaKnown RBP eCLIP18.13■□□□□ 0.49
CXorf40A-205ENST00000423540 GPR162Q16538 588 aa18.13■□□□□ 0.49
CXorf40A-205ENST00000423540 RUNDC1Q96C34 613 aa18.13■□□□□ 0.49
CXorf40A-205ENST00000423540 TEX13AQ9BXU3 409 aaPredicted RBP18.13■□□□□ 0.49
CXorf40A-205ENST00000423540 NARFQ9UHQ1 456 aa18.13■□□□□ 0.49
CXorf40A-205ENST00000423540 ZNF330Q9Y3S2 320 aaPredicted RBP18.13■□□□□ 0.49
CXorf40A-205ENST00000423540 ZPR1O75312 459 aa18.12■□□□□ 0.49
CXorf40A-205ENST00000423540 SNRPA1P09661 255 aaKnown RBP18.11■□□□□ 0.49
CXorf40A-205ENST00000423540 TM4SF1P30408 202 aa18.11■□□□□ 0.49
CXorf40A-205ENST00000423540 TRIM35Q9UPQ4 493 aa18.11■□□□□ 0.49
CXorf40A-205ENST00000423540 TBC1D2BQ9UPU7 963 aa18.11■□□□□ 0.49
CXorf40A-205ENST00000423540 PARP3Q9Y6F1 533 aa18.11■□□□□ 0.49
CXorf40A-205ENST00000423540 KIAA1551Q9HCM1 1747 aa18.11■□□□□ 0.49
CXorf40A-205ENST00000423540 KIF13BQ9NQT8 1826 aa18.1■□□□□ 0.49
CXorf40A-205ENST00000423540 EIF4A1P60842 406 aaKnown RBP18.1■□□□□ 0.49
CXorf40A-205ENST00000423540 N4BP2Q86UW6 1770 aaPredicted RBP18.09■□□□□ 0.49
CXorf40A-205ENST00000423540 SENP3-EIF4A1A0A087X0R7 540 aa18.09■□□□□ 0.49
CXorf40A-205ENST00000423540 NBPF26B4DH59 902 aa18.09■□□□□ 0.49
CXorf40A-205ENST00000423540 POLRMTO00411 1230 aaKnown RBP18.09■□□□□ 0.49
CXorf40A-205ENST00000423540 IL6STP40189 918 aaPredicted RBP18.09■□□□□ 0.49
CXorf40A-205ENST00000423540 NBPF10Q6P3W6 841 aaKnown RBP18.09■□□□□ 0.49
CXorf40A-205ENST00000423540 NBPF15Q8N660 670 aa18.09■□□□□ 0.49
CXorf40A-205ENST00000423540 C10orf71Q711Q0 1435 aa18.08■□□□□ 0.49
CXorf40A-205ENST00000423540 YY1P25490 414 aa18.08■□□□□ 0.48
CXorf40A-205ENST00000423540 NFIXQ14938 502 aa18.08■□□□□ 0.48
CXorf40A-205ENST00000423540 PNISRQ8TF01 805 aaKnown RBP18.08■□□□□ 0.48
CXorf40A-205ENST00000423540 PXDNLA1KZ92 1463 aa18.07■□□□□ 0.48
CXorf40A-205ENST00000423540 A0A0G2JLW4 131 aa18.07■□□□□ 0.48
CXorf40A-205ENST00000423540 GIGYF1O75420 1035 aaPredicted RBP18.07■□□□□ 0.48
CXorf40A-205ENST00000423540 BICDL1Q6ZP65 573 aa18.07■□□□□ 0.48
CXorf40A-205ENST00000423540 TSPYL4Q9UJ04 414 aa18.07■□□□□ 0.48
CXorf40A-205ENST00000423540 AFDNP55196 1824 aaKnown RBP18.07■□□□□ 0.48
CXorf40A-205ENST00000423540 LAMB4A4D0S4 1761 aa18.07■□□□□ 0.48
CXorf40A-205ENST00000423540 SCN7AQ01118 1682 aa18.06■□□□□ 0.48
CXorf40A-205ENST00000423540 A0A087WZG4 1122 aa18.06■□□□□ 0.48
CXorf40A-205ENST00000423540 APAF1O14727 1248 aa18.06■□□□□ 0.48
CXorf40A-205ENST00000423540 ANP32CO43423 234 aa18.05■□□□□ 0.48
CXorf40A-205ENST00000423540 CAMTA2O94983 1202 aa18.05■□□□□ 0.48
CXorf40A-205ENST00000423540 DPEP1P16444 411 aa18.05■□□□□ 0.48
CXorf40A-205ENST00000423540 TBC1D9BQ66K14 1250 aa18.05■□□□□ 0.48
CXorf40A-205ENST00000423540 LMOD3Q0VAK6 560 aa18.04■□□□□ 0.48
CXorf40A-205ENST00000423540 KRT24Q2M2I5 525 aa18.04■□□□□ 0.48
CXorf40A-205ENST00000423540 DZIP3Q86Y13 1208 aaKnown RBP18.04■□□□□ 0.48
CXorf40A-205ENST00000423540 LAS1LQ9Y4W2 734 aaKnown RBP18.04■□□□□ 0.48
CXorf40A-205ENST00000423540 BCORQ6W2J9 1755 aa18.04■□□□□ 0.48
CXorf40A-205ENST00000423540 NRXN2Q9P2S2 1712 aa18.03■□□□□ 0.48
CXorf40A-205ENST00000423540 CHD4Q14839 1912 aa18.02■□□□□ 0.48
CXorf40A-205ENST00000423540 SERPINB2P05120 415 aa18.02■□□□□ 0.48
CXorf40A-205ENST00000423540 KCNA3P22001 575 aa18.02■□□□□ 0.48
CXorf40A-205ENST00000423540 TGFB2P61812 414 aa18.02■□□□□ 0.48
CXorf40A-205ENST00000423540 CCDC24Q8N4L8 307 aa18.02■□□□□ 0.48
CXorf40A-205ENST00000423540 NGEFQ8N5V2 710 aa18.02■□□□□ 0.48
CXorf40A-205ENST00000423540 CHL1O00533 1208 aa18.01■□□□□ 0.47
CXorf40A-205ENST00000423540 CHRNA5P30532 468 aa18.01■□□□□ 0.47
CXorf40A-205ENST00000423540 MRS2Q9HD23 443 aa18.01■□□□□ 0.47
CXorf40A-205ENST00000423540 CARMIL3Q8ND23 1372 aa18.01■□□□□ 0.47
CXorf40A-205ENST00000423540 MYL6BP14649 208 aa18■□□□□ 0.47
CXorf40A-205ENST00000423540 BRCA1P38398 1863 aaKnown RBP17.99■□□□□ 0.47
CXorf40A-205ENST00000423540 EIF2S2P20042 333 aaKnown RBP17.99■□□□□ 0.47
CXorf40A-205ENST00000423540 HLFQ16534 295 aa17.99■□□□□ 0.47
CXorf40A-205ENST00000423540 NPM2Q86SE8 214 aaKnown RBP17.99■□□□□ 0.47
CXorf40A-205ENST00000423540 NECTIN2Q92692 538 aa17.99■□□□□ 0.47
CXorf40A-205ENST00000423540 BABAM1Q9NWV8 329 aa17.99■□□□□ 0.47
CXorf40A-205ENST00000423540 GRIN3BO60391 1043 aa17.98■□□□□ 0.47
CXorf40A-205ENST00000423540 ANXA1P04083 346 aa17.98■□□□□ 0.47
CXorf40A-205ENST00000423540 PROSER3Q2NL68 480 aa17.98■□□□□ 0.47
CXorf40A-205ENST00000423540 TTLL7Q6ZT98 887 aa17.98■□□□□ 0.47
CXorf40A-205ENST00000423540 BCS1LQ9Y276 419 aa17.98■□□□□ 0.47
CXorf40A-205ENST00000423540 PDIA6Q15084 440 aa17.97■□□□□ 0.47
CXorf40A-205ENST00000423540 ANKRD31Q8N7Z5 1873 aa17.97■□□□□ 0.47
CXorf40A-205ENST00000423540 PRR5LQ6MZQ0 368 aa17.96■□□□□ 0.47
CXorf40A-205ENST00000423540 SETDB2Q96T68 719 aa17.96■□□□□ 0.47
CXorf40A-205ENST00000423540 MBIPQ9NS73 344 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms