RNA–Protein interactions for RNA: ENST00000421230.6

PPFIA3-202, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 2,236 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-202ENST00000421230 HEG1Q9ULI3 1381 aa22.76■■□□□ 1.23
PPFIA3-202ENST00000421230 SOS1Q07889 1333 aaPredicted RBP22.76■■□□□ 1.23
PPFIA3-202ENST00000421230 ZNF496Q96IT1 587 aaPredicted RBP22.76■■□□□ 1.23
PPFIA3-202ENST00000421230 A0A0G2JS52 829 aa22.76■■□□□ 1.23
PPFIA3-202ENST00000421230 G2E3Q7L622 706 aa22.76■■□□□ 1.23
PPFIA3-202ENST00000421230 MARCH10Q8NA82 808 aaPredicted RBP22.76■■□□□ 1.23
PPFIA3-202ENST00000421230 STK31Q9BXU1 1019 aa22.76■■□□□ 1.23
PPFIA3-202ENST00000421230 TMOD3Q9NYL9 352 aa22.75■■□□□ 1.23
PPFIA3-202ENST00000421230 HOXB7P09629 217 aa22.74■■□□□ 1.23
PPFIA3-202ENST00000421230 ARHGAP45Q92619 1136 aa22.74■■□□□ 1.23
PPFIA3-202ENST00000421230 TBC1D32Q96NH3 1257 aa22.73■■□□□ 1.23
PPFIA3-202ENST00000421230 ITGB4P16144 1822 aa22.73■■□□□ 1.23
PPFIA3-202ENST00000421230 TMEM57Q8N5G2 664 aa22.73■■□□□ 1.23
PPFIA3-202ENST00000421230 PIGBQ92521 554 aa22.73■■□□□ 1.23
PPFIA3-202ENST00000421230 GJD4Q96KN9 370 aaPredicted RBP22.73■■□□□ 1.23
PPFIA3-202ENST00000421230 SYTL4Q96C24 671 aaPredicted RBP22.72■■□□□ 1.23
PPFIA3-202ENST00000421230 GLI3P10071 1580 aa22.72■■□□□ 1.23
PPFIA3-202ENST00000421230 L1TD1Q5T7N2 865 aaKnown RBP22.72■■□□□ 1.23
PPFIA3-202ENST00000421230 UBE2Q2Q8WVN8 375 aa22.72■■□□□ 1.23
PPFIA3-202ENST00000421230 FMNL2Q96PY5 1086 aa22.72■■□□□ 1.23
PPFIA3-202ENST00000421230 SLKQ9H2G2 1235 aaPredicted RBP22.72■■□□□ 1.23
PPFIA3-202ENST00000421230 MVPQ14764 893 aaKnown RBP22.71■■□□□ 1.23
PPFIA3-202ENST00000421230 CHPF2Q9P2E5 772 aa22.71■■□□□ 1.23
PPFIA3-202ENST00000421230 C5P01031 1676 aa22.71■■□□□ 1.23
PPFIA3-202ENST00000421230 ITPRIPQ8IWB1 547 aa22.7■■□□□ 1.23
PPFIA3-202ENST00000421230 TRPC5Q9UL62 973 aaPredicted RBP22.7■■□□□ 1.23
PPFIA3-202ENST00000421230 ATRNO75882 1429 aa22.7■■□□□ 1.22
PPFIA3-202ENST00000421230 ANXA1P04083 346 aa22.7■■□□□ 1.22
PPFIA3-202ENST00000421230 PRIM1P49642 420 aaKnown RBP22.7■■□□□ 1.22
PPFIA3-202ENST00000421230 API5Q9BZZ5 524 aaKnown RBP22.7■■□□□ 1.22
PPFIA3-202ENST00000421230 PCDHB15Q9Y5E8 787 aa22.7■■□□□ 1.22
PPFIA3-202ENST00000421230 DOT1LQ8TEK3 1739 aa22.69■■□□□ 1.22
PPFIA3-202ENST00000421230 PTCD1O75127 700 aaKnown RBP22.69■■□□□ 1.22
PPFIA3-202ENST00000421230 ACSBG1Q96GR2 724 aa22.69■■□□□ 1.22
PPFIA3-202ENST00000421230 QTRT2Q9H974 415 aaKnown RBP22.69■■□□□ 1.22
PPFIA3-202ENST00000421230 ASAP1Q9ULH1 1129 aa22.69■■□□□ 1.22
PPFIA3-202ENST00000421230 PAPPAQ13219 1627 aa22.69■■□□□ 1.22
PPFIA3-202ENST00000421230 SNRPA1P09661 255 aaKnown RBP22.68■■□□□ 1.22
PPFIA3-202ENST00000421230 TBC1D2Q9BYX2 928 aa22.68■■□□□ 1.22
PPFIA3-202ENST00000421230 PHAXQ9H814 394 aaKnown RBP22.68■■□□□ 1.22
PPFIA3-202ENST00000421230 UPF2Q9HAU5 1272 aaKnown RBP22.68■■□□□ 1.22
PPFIA3-202ENST00000421230 PTPRCP08575 1304 aa22.68■■□□□ 1.22
PPFIA3-202ENST00000421230 RGS12O14924 1447 aa22.68■■□□□ 1.22
PPFIA3-202ENST00000421230 CACNA1FO60840 1977 aa22.68■■□□□ 1.22
PPFIA3-202ENST00000421230 FLIIQ13045 1269 aa22.67■■□□□ 1.22
PPFIA3-202ENST00000421230 USP16Q9Y5T5 823 aa22.67■■□□□ 1.22
PPFIA3-202ENST00000421230 UBR2Q8IWV8 1755 aa22.67■■□□□ 1.22
PPFIA3-202ENST00000421230 EIF5BO60841 1220 aaKnown RBP22.67■■□□□ 1.22
PPFIA3-202ENST00000421230 PDZRN3Q9UPQ7 1066 aa22.67■■□□□ 1.22
PPFIA3-202ENST00000421230 ABCC4O15439 1325 aa22.67■■□□□ 1.22
PPFIA3-202ENST00000421230 BCL9O00512 1426 aa22.67■■□□□ 1.22
PPFIA3-202ENST00000421230 KCPQ6ZWJ8 1503 aa22.67■■□□□ 1.22
PPFIA3-202ENST00000421230 PROSER3Q2NL68 480 aa22.66■■□□□ 1.22
PPFIA3-202ENST00000421230 THSD7AQ9UPZ6 1657 aa22.66■■□□□ 1.22
PPFIA3-202ENST00000421230 F6X3S4 739 aa22.66■■□□□ 1.22
PPFIA3-202ENST00000421230 ATG3Q9NT62 314 aa22.66■■□□□ 1.22
PPFIA3-202ENST00000421230 FKBP5Q13451 457 aaPredicted RBP22.65■■□□□ 1.22
PPFIA3-202ENST00000421230 CHMP4AQ9BY43 222 aa22.65■■□□□ 1.22
PPFIA3-202ENST00000421230 DBF4Q9UBU7 674 aaPredicted RBP22.65■■□□□ 1.22
PPFIA3-202ENST00000421230 FAM182BQ5T319 152 aa22.63■■□□□ 1.21
PPFIA3-202ENST00000421230 RRAGDQ9NQL2 400 aaPredicted RBP22.63■■□□□ 1.21
PPFIA3-202ENST00000421230 DDX19BQ9UMR2 479 aa22.63■■□□□ 1.21
PPFIA3-202ENST00000421230 FBXO41Q8TF61 875 aa22.63■■□□□ 1.21
PPFIA3-202ENST00000421230 PIP4K2AP48426 406 aaPredicted RBP22.62■■□□□ 1.21
PPFIA3-202ENST00000421230 RWDD1Q9H446 243 aaPredicted RBP22.62■■□□□ 1.21
PPFIA3-202ENST00000421230 PDIA6Q15084 440 aa22.62■■□□□ 1.21
PPFIA3-202ENST00000421230 SLC4A10Q6U841 1118 aa22.62■■□□□ 1.21
PPFIA3-202ENST00000421230 KCNQ2O43526 872 aa22.61■■□□□ 1.21
PPFIA3-202ENST00000421230 RBM42Q9BTD8 480 aaKnown RBP22.61■■□□□ 1.21
PPFIA3-202ENST00000421230 FSD2A1L4K1 749 aa22.61■■□□□ 1.21
PPFIA3-202ENST00000421230 ONECUT3O60422 494 aaPredicted RBP22.61■■□□□ 1.21
PPFIA3-202ENST00000421230 MYL6BP14649 208 aa22.61■■□□□ 1.21
PPFIA3-202ENST00000421230 SEPT12Q8IYM1 358 aa22.61■■□□□ 1.21
PPFIA3-202ENST00000421230 DDX21Q9NR30 783 aaKnown RBP eCLIP22.61■■□□□ 1.21
PPFIA3-202ENST00000421230 INTS3Q68E01 1043 aaKnown RBP22.59■■□□□ 1.21
PPFIA3-202ENST00000421230 LAMB4A4D0S4 1761 aa22.59■■□□□ 1.21
PPFIA3-202ENST00000421230 ZBTB7BO15156 539 aaPredicted RBP22.58■■□□□ 1.2
PPFIA3-202ENST00000421230 HYPKQ9NX55 129 aa22.58■■□□□ 1.2
PPFIA3-202ENST00000421230 MCM4P33991 863 aa22.57■■□□□ 1.2
PPFIA3-202ENST00000421230 AIMP1Q12904 312 aaKnown RBP22.57■■□□□ 1.2
PPFIA3-202ENST00000421230 ZBTB40Q9NUA8 1239 aa22.57■■□□□ 1.2
PPFIA3-202ENST00000421230 XRCC6P12956 609 aaKnown RBP eCLIP22.57■■□□□ 1.2
PPFIA3-202ENST00000421230 SLC4A9Q96Q91 983 aa22.56■■□□□ 1.2
PPFIA3-202ENST00000421230 PI4KAP2A4QPH2 592 aa22.55■■□□□ 1.2
PPFIA3-202ENST00000421230 A1BGP04217 495 aa22.55■■□□□ 1.2
PPFIA3-202ENST00000421230 PTF1AQ7RTS3 328 aa22.55■■□□□ 1.2
PPFIA3-202ENST00000421230 DNAJC10Q8IXB1 793 aa22.55■■□□□ 1.2
PPFIA3-202ENST00000421230 PI4KAP1Q8N8J0 262 aa22.55■■□□□ 1.2
PPFIA3-202ENST00000421230 ZNF772Q68DY9 489 aaPredicted RBP22.55■■□□□ 1.2
PPFIA3-202ENST00000421230 GOLGA6L3A6NEY3 463 aa22.54■■□□□ 1.2
PPFIA3-202ENST00000421230 EP400Q96L91 3159 aa22.54■■□□□ 1.2
PPFIA3-202ENST00000421230 NBPF26B4DH59 902 aa22.54■■□□□ 1.2
PPFIA3-202ENST00000421230 NBPF14Q5TI25 921 aa22.54■■□□□ 1.2
PPFIA3-202ENST00000421230 NBPF10Q6P3W6 841 aaKnown RBP22.54■■□□□ 1.2
PPFIA3-202ENST00000421230 NBPF15Q8N660 670 aa22.54■■□□□ 1.2
PPFIA3-202ENST00000421230 C1orf115Q9H7X2 142 aa22.54■■□□□ 1.2
PPFIA3-202ENST00000421230 LRP10Q7Z4F1 713 aa22.53■■□□□ 1.2
PPFIA3-202ENST00000421230 VSIG10Q8N0Z9 540 aa22.53■■□□□ 1.2
PPFIA3-202ENST00000421230 XAGE3Q8WTP9 111 aa22.53■■□□□ 1.2
PPFIA3-202ENST00000421230 ADCY9O60503 1353 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms