RNA–Protein interactions for RNA: ENST00000420831.1

SEMA3F-204, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-204ENST00000420831 TJP1Q07157 1748 aa10.88□□□□□ -0.67
SEMA3F-204ENST00000420831 NEUROD2Q15784 382 aa10.88□□□□□ -0.67
SEMA3F-204ENST00000420831 FHDC1Q9C0D6 1143 aaPredicted RBP10.88□□□□□ -0.67
SEMA3F-204ENST00000420831 SRP68Q9UHB9 627 aaKnown RBP10.88□□□□□ -0.67
SEMA3F-204ENST00000420831 ZBTB1Q9Y2K1 713 aa10.88□□□□□ -0.67
SEMA3F-204ENST00000420831 RPS6KA4O75676 772 aa10.87□□□□□ -0.67
SEMA3F-204ENST00000420831 TMPOP42166 694 aaKnown RBP10.87□□□□□ -0.67
SEMA3F-204ENST00000420831 RC3H1Q5TC82 1133 aaKnown RBP10.87□□□□□ -0.67
SEMA3F-204ENST00000420831 ARXQ96QS3 562 aa10.87□□□□□ -0.67
SEMA3F-204ENST00000420831 PPP1R1BQ9UD71 204 aaPredicted RBP10.87□□□□□ -0.67
SEMA3F-204ENST00000420831 TRIM35Q9UPQ4 493 aa10.87□□□□□ -0.67
SEMA3F-204ENST00000420831 USP16Q9Y5T5 823 aa10.87□□□□□ -0.67
SEMA3F-204ENST00000420831 CNTNAP4Q9C0A0 1308 aa10.86□□□□□ -0.67
SEMA3F-204ENST00000420831 A1BGP04217 495 aa10.86□□□□□ -0.67
SEMA3F-204ENST00000420831 SSFA2P28290 1259 aa10.86□□□□□ -0.67
SEMA3F-204ENST00000420831 RIPK4P57078 832 aa10.86□□□□□ -0.67
SEMA3F-204ENST00000420831 NLGN2Q8NFZ4 835 aa10.86□□□□□ -0.67
SEMA3F-204ENST00000420831 SLC16A10Q8TF71 515 aa10.86□□□□□ -0.67
SEMA3F-204ENST00000420831 RTF1Q92541 710 aaKnown RBP10.86□□□□□ -0.67
SEMA3F-204ENST00000420831 SYT17Q9BSW7 474 aa10.86□□□□□ -0.67
SEMA3F-204ENST00000420831 RTCBQ9Y3I0 505 aaKnown RBP10.86□□□□□ -0.67
SEMA3F-204ENST00000420831 UBR3Q6ZT12 1888 aa10.86□□□□□ -0.67
SEMA3F-204ENST00000420831 MYH14Q7Z406 1995 aaKnown RBP10.86□□□□□ -0.67
SEMA3F-204ENST00000420831 SIPA1L3O60292 1781 aaPredicted RBP10.85□□□□□ -0.67
SEMA3F-204ENST00000420831 COL5A3P25940 1745 aaPredicted RBP10.85□□□□□ -0.67
SEMA3F-204ENST00000420831 QSER1Q2KHR3 1735 aa10.85□□□□□ -0.67
SEMA3F-204ENST00000420831 HTATSF1O43719 755 aaKnown RBP10.85□□□□□ -0.67
SEMA3F-204ENST00000420831 TRAPPC3LQ5T215 181 aa10.85□□□□□ -0.67
SEMA3F-204ENST00000420831 TTC5Q8N0Z6 440 aa10.85□□□□□ -0.67
SEMA3F-204ENST00000420831 CCDC87Q9NVE4 849 aa10.85□□□□□ -0.67
SEMA3F-204ENST00000420831 HEG1Q9ULI3 1381 aa10.85□□□□□ -0.67
SEMA3F-204ENST00000420831 SOS1Q07889 1333 aaPredicted RBP10.84□□□□□ -0.67
SEMA3F-204ENST00000420831 MAPK8IP3Q9UPT6 1336 aa10.84□□□□□ -0.67
SEMA3F-204ENST00000420831 VIRMAQ69YN4 1812 aaKnown RBP10.84□□□□□ -0.67
SEMA3F-204ENST00000420831 GYS1P13807 737 aa10.84□□□□□ -0.67
SEMA3F-204ENST00000420831 CANXP27824 592 aaKnown RBP10.84□□□□□ -0.67
SEMA3F-204ENST00000420831 WDR43Q15061 677 aaKnown RBP eCLIP10.84□□□□□ -0.67
SEMA3F-204ENST00000420831 TAF7Q15545 349 aaPredicted RBP10.84□□□□□ -0.67
SEMA3F-204ENST00000420831 KLHL34Q8N239 644 aa10.84□□□□□ -0.67
SEMA3F-204ENST00000420831 RUNDC1Q96C34 613 aa10.84□□□□□ -0.67
SEMA3F-204ENST00000420831 BCL2L12Q9HB09 334 aa10.84□□□□□ -0.67
SEMA3F-204ENST00000420831 UBR2Q8IWV8 1755 aa10.83□□□□□ -0.68
SEMA3F-204ENST00000420831 ZNF831Q5JPB2 1677 aa10.83□□□□□ -0.68
SEMA3F-204ENST00000420831 APAF1O14727 1248 aa10.83□□□□□ -0.68
SEMA3F-204ENST00000420831 KRT24Q2M2I5 525 aa10.83□□□□□ -0.68
SEMA3F-204ENST00000420831 VSIG10Q8N0Z9 540 aa10.83□□□□□ -0.68
SEMA3F-204ENST00000420831 PNISRQ8TF01 805 aaKnown RBP10.83□□□□□ -0.68
SEMA3F-204ENST00000420831 COL24A1Q17RW2 1714 aa10.82□□□□□ -0.68
SEMA3F-204ENST00000420831 NBPF26B4DH59 902 aa10.82□□□□□ -0.68
SEMA3F-204ENST00000420831 ANP32CO43423 234 aa10.82□□□□□ -0.68
SEMA3F-204ENST00000420831 MMP10P09238 476 aa10.82□□□□□ -0.68
SEMA3F-204ENST00000420831 EIF4A1P60842 406 aaKnown RBP10.82□□□□□ -0.68
SEMA3F-204ENST00000420831 USPL1Q5W0Q7 1092 aa10.82□□□□□ -0.68
SEMA3F-204ENST00000420831 NBPF10Q6P3W6 841 aaKnown RBP10.82□□□□□ -0.68
SEMA3F-204ENST00000420831 NBPF15Q8N660 670 aa10.82□□□□□ -0.68
SEMA3F-204ENST00000420831 FLAD1Q8NFF5 587 aa10.82□□□□□ -0.68
SEMA3F-204ENST00000420831 FMNL2Q96PY5 1086 aa10.82□□□□□ -0.68
SEMA3F-204ENST00000420831 WWC3Q9ULE0 1092 aa10.82□□□□□ -0.68
SEMA3F-204ENST00000420831 DLG5Q8TDM6 1919 aa10.82□□□□□ -0.68
SEMA3F-204ENST00000420831 USP42Q9H9J4 1324 aaKnown RBP10.82□□□□□ -0.68
SEMA3F-204ENST00000420831 CICQ96RK0 1608 aaPredicted RBP10.81□□□□□ -0.68
SEMA3F-204ENST00000420831 POLD1P28340 1107 aa10.81□□□□□ -0.68
SEMA3F-204ENST00000420831 RFC4P35249 363 aa10.81□□□□□ -0.68
SEMA3F-204ENST00000420831 EIF5P55010 431 aaKnown RBP10.81□□□□□ -0.68
SEMA3F-204ENST00000420831 DDR1Q08345 913 aa10.81□□□□□ -0.68
SEMA3F-204ENST00000420831 MRS2Q9HD23 443 aa10.81□□□□□ -0.68
SEMA3F-204ENST00000420831 NEFMP07197 916 aa10.8□□□□□ -0.68
SEMA3F-204ENST00000420831 TBC1D2BQ9UPU7 963 aa10.8□□□□□ -0.68
SEMA3F-204ENST00000420831 ZNF330Q9Y3S2 320 aaPredicted RBP10.8□□□□□ -0.68
SEMA3F-204ENST00000420831 COL15A1P39059 1388 aa10.79□□□□□ -0.68
SEMA3F-204ENST00000420831 C4AP0C0L4 1744 aa10.79□□□□□ -0.68
SEMA3F-204ENST00000420831 GIGYF1O75420 1035 aaPredicted RBP10.79□□□□□ -0.68
SEMA3F-204ENST00000420831 STARD3NLO95772 234 aa10.79□□□□□ -0.68
SEMA3F-204ENST00000420831 TM4SF1P30408 202 aa10.79□□□□□ -0.68
SEMA3F-204ENST00000420831 PNNQ9H307 717 aaKnown RBP10.79□□□□□ -0.68
SEMA3F-204ENST00000420831 TSPYL4Q9UJ04 414 aa10.79□□□□□ -0.68
SEMA3F-204ENST00000420831 LAS1LQ9Y4W2 734 aaKnown RBP10.79□□□□□ -0.68
SEMA3F-204ENST00000420831 ANXA1P04083 346 aa10.78□□□□□ -0.68
SEMA3F-204ENST00000420831 SNRPA1P09661 255 aaKnown RBP10.78□□□□□ -0.68
SEMA3F-204ENST00000420831 NFIXQ14938 502 aa10.78□□□□□ -0.68
SEMA3F-204ENST00000420831 POLRMTO00411 1230 aaKnown RBP10.77□□□□□ -0.69
SEMA3F-204ENST00000420831 CHL1O00533 1208 aa10.77□□□□□ -0.69
SEMA3F-204ENST00000420831 CAMTA2O94983 1202 aa10.77□□□□□ -0.69
SEMA3F-204ENST00000420831 YBX3P16989 372 aaKnown RBP eCLIP10.77□□□□□ -0.69
SEMA3F-204ENST00000420831 PROSER3Q2NL68 480 aa10.77□□□□□ -0.69
SEMA3F-204ENST00000420831 TBC1D9BQ66K14 1250 aa10.77□□□□□ -0.69
SEMA3F-204ENST00000420831 BICDL1Q6ZP65 573 aa10.77□□□□□ -0.69
SEMA3F-204ENST00000420831 CCDC24Q8N4L8 307 aa10.77□□□□□ -0.69
SEMA3F-204ENST00000420831 NGEFQ8N5V2 710 aa10.77□□□□□ -0.69
SEMA3F-204ENST00000420831 NECTIN2Q92692 538 aa10.77□□□□□ -0.69
SEMA3F-204ENST00000420831 NARFQ9UHQ1 456 aa10.77□□□□□ -0.69
SEMA3F-204ENST00000420831 SALL2Q9Y467 1007 aaPredicted RBP10.77□□□□□ -0.69
SEMA3F-204ENST00000420831 KDM3BQ7LBC6 1761 aa10.76□□□□□ -0.69
SEMA3F-204ENST00000420831 PDIA6Q15084 440 aa10.76□□□□□ -0.69
SEMA3F-204ENST00000420831 LRP10Q7Z4F1 713 aa10.76□□□□□ -0.69
SEMA3F-204ENST00000420831 FAM9BQ8IZU0 186 aa10.76□□□□□ -0.69
SEMA3F-204ENST00000420831 NLGN1Q8N2Q7 840 aa10.76□□□□□ -0.69
SEMA3F-204ENST00000420831 PLCD3Q8N3E9 789 aa10.76□□□□□ -0.69
SEMA3F-204ENST00000420831 TEX13AQ9BXU3 409 aaPredicted RBP10.76□□□□□ -0.69
SEMA3F-204ENST00000420831 A0A0G2JLW4 131 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms