RNA–Protein interactions for RNA: ENST00000419220.1

LINC02539-202, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2

Gene LINC02539, Length 703 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-202ENST00000419220 HMGB2P26583 209 aaKnown RBP9.03□□□□□ -0.96
LINC02539-202ENST00000419220 HOXC9P31274 260 aa9.03□□□□□ -0.96
LINC02539-202ENST00000419220 DDX10Q13206 875 aaKnown RBP9.03□□□□□ -0.96
LINC02539-202ENST00000419220 SF3B2Q13435 895 aaKnown RBP9.03□□□□□ -0.96
LINC02539-202ENST00000419220 RALBP1Q15311 655 aa9.03□□□□□ -0.96
LINC02539-202ENST00000419220 CCDC125Q86Z20 511 aa9.03□□□□□ -0.96
LINC02539-202ENST00000419220 ZBED2Q9BTP6 218 aa9.03□□□□□ -0.96
LINC02539-202ENST00000419220 RGS17Q9UGC6 210 aaPredicted RBP9.03□□□□□ -0.96
LINC02539-202ENST00000419220 NUDCQ9Y266 331 aa9.03□□□□□ -0.96
LINC02539-202ENST00000419220 MAP3K19Q56UN5 1328 aa9.03□□□□□ -0.96
LINC02539-202ENST00000419220 SPATA31A1Q5TZJ5 1347 aa9.03□□□□□ -0.96
LINC02539-202ENST00000419220 INSRP06213 1382 aa9.02□□□□□ -0.97
LINC02539-202ENST00000419220 NFAT5O94916 1531 aa9.02□□□□□ -0.97
LINC02539-202ENST00000419220 FAM208AQ9UK61 1670 aaKnown RBP9.02□□□□□ -0.97
LINC02539-202ENST00000419220 ONECUT3O60422 494 aaPredicted RBP9.02□□□□□ -0.97
LINC02539-202ENST00000419220 RRS1Q15050 365 aaKnown RBP9.02□□□□□ -0.97
LINC02539-202ENST00000419220 FAM98CQ17RN3 349 aaKnown RBP9.02□□□□□ -0.97
LINC02539-202ENST00000419220 RBM26Q5T8P6 1007 aaKnown RBP9.02□□□□□ -0.97
LINC02539-202ENST00000419220 SMYD5Q6GMV2 418 aa9.02□□□□□ -0.97
LINC02539-202ENST00000419220 LARP1Q6PKG0 1096 aaKnown RBP9.02□□□□□ -0.97
LINC02539-202ENST00000419220 ZC3H15Q8WU90 426 aaKnown RBP9.02□□□□□ -0.97
LINC02539-202ENST00000419220 RAPGEF4Q8WZA2 1011 aa9.02□□□□□ -0.97
LINC02539-202ENST00000419220 LTV1Q96GA3 475 aaPredicted RBP9.02□□□□□ -0.97
LINC02539-202ENST00000419220 PNNQ9H307 717 aaKnown RBP9.02□□□□□ -0.97
LINC02539-202ENST00000419220 COL5A2P05997 1499 aaPredicted RBP9.02□□□□□ -0.97
LINC02539-202ENST00000419220 IL2RBP14784 551 aa9.01□□□□□ -0.97
LINC02539-202ENST00000419220 DDB1Q16531 1140 aa9.01□□□□□ -0.97
LINC02539-202ENST00000419220 KRT27Q7Z3Y8 459 aa9.01□□□□□ -0.97
LINC02539-202ENST00000419220 SEPT12Q8IYM1 358 aa9.01□□□□□ -0.97
LINC02539-202ENST00000419220 ANKK1Q8NFD2 765 aa9.01□□□□□ -0.97
LINC02539-202ENST00000419220 CAMTA1Q9Y6Y1 1673 aa9□□□□□ -0.97
LINC02539-202ENST00000419220 GFRA3O60609 400 aa9□□□□□ -0.97
LINC02539-202ENST00000419220 TATP17735 454 aaPredicted RBP9□□□□□ -0.97
LINC02539-202ENST00000419220 CNGB1Q14028 1251 aaPredicted RBP9□□□□□ -0.97
LINC02539-202ENST00000419220 POLKQ9UBT6 870 aa9□□□□□ -0.97
LINC02539-202ENST00000419220 ANP32CO43423 234 aa8.99□□□□□ -0.97
LINC02539-202ENST00000419220 DIAPH1O60610 1272 aaKnown RBP8.99□□□□□ -0.97
LINC02539-202ENST00000419220 MAP3K9P80192 1104 aa8.99□□□□□ -0.97
LINC02539-202ENST00000419220 KCNC4Q03721 635 aa8.99□□□□□ -0.97
LINC02539-202ENST00000419220 PDIA6Q15084 440 aa8.99□□□□□ -0.97
LINC02539-202ENST00000419220 FAM196AQ6ZSG2 479 aa8.99□□□□□ -0.97
LINC02539-202ENST00000419220 SPG7Q9UQ90 795 aa8.99□□□□□ -0.97
LINC02539-202ENST00000419220 LMO7Q8WWI1 1683 aa8.99□□□□□ -0.97
LINC02539-202ENST00000419220 NRAPQ86VF7 1730 aa8.99□□□□□ -0.97
LINC02539-202ENST00000419220 RGPD5Q99666 1765 aa8.99□□□□□ -0.97
LINC02539-202ENST00000419220 MTHFSP49914 203 aa8.98□□□□□ -0.97
LINC02539-202ENST00000419220 HSP90AB2PQ58FF8 381 aa8.98□□□□□ -0.97
LINC02539-202ENST00000419220 EMILIN1Q9Y6C2 1016 aa8.98□□□□□ -0.97
LINC02539-202ENST00000419220 COL18A1P39060 1754 aa8.98□□□□□ -0.97
LINC02539-202ENST00000419220 SPDYE16A6NNV3 312 aaPredicted RBP8.97□□□□□ -0.97
LINC02539-202ENST00000419220 SOCS7O14512 581 aa8.97□□□□□ -0.97
LINC02539-202ENST00000419220 AMOTQ4VCS5 1084 aa8.97□□□□□ -0.97
LINC02539-202ENST00000419220 PLEKHG2Q9H7P9 1386 aa8.97□□□□□ -0.97
LINC02539-202ENST00000419220 GRXCR2A6NFK2 248 aa8.96□□□□□ -0.98
LINC02539-202ENST00000419220 HSP90AB1P08238 724 aaKnown RBP8.96□□□□□ -0.98
LINC02539-202ENST00000419220 PLEKHO1Q53GL0 409 aaPredicted RBP8.96□□□□□ -0.98
LINC02539-202ENST00000419220 OVOS2A0A0G2JMS6 1433 aa8.96□□□□□ -0.98
LINC02539-202ENST00000419220 LCE2BO14633 110 aa8.95□□□□□ -0.98
LINC02539-202ENST00000419220 FBLN1P23142 703 aa8.95□□□□□ -0.98
LINC02539-202ENST00000419220 FOSBP53539 338 aa8.95□□□□□ -0.98
LINC02539-202ENST00000419220 ZCRB1Q8TBF4 217 aaKnown RBP8.95□□□□□ -0.98
LINC02539-202ENST00000419220 SLC24A3Q9HC58 644 aa8.95□□□□□ -0.98
LINC02539-202ENST00000419220 GLI3P10071 1580 aa8.95□□□□□ -0.98
LINC02539-202ENST00000419220 KAT6BQ8WYB5 2073 aa8.94□□□□□ -0.98
LINC02539-202ENST00000419220 NRG2O14511 850 aaPredicted RBP8.94□□□□□ -0.98
LINC02539-202ENST00000419220 U2SURPO15042 1029 aaKnown RBP8.94□□□□□ -0.98
LINC02539-202ENST00000419220 PPP2R1AP30153 589 aa8.94□□□□□ -0.98
LINC02539-202ENST00000419220 BAG6P46379 1132 aa8.94□□□□□ -0.98
LINC02539-202ENST00000419220 EIF4A2Q14240 407 aaKnown RBP8.94□□□□□ -0.98
LINC02539-202ENST00000419220 C1orf141Q5JVX7 400 aa8.94□□□□□ -0.98
LINC02539-202ENST00000419220 NBPF6Q5VWK0 638 aa8.94□□□□□ -0.98
LINC02539-202ENST00000419220 OXER1Q8TDS5 423 aa8.94□□□□□ -0.98
LINC02539-202ENST00000419220 NBPF4Q96M43 638 aa8.94□□□□□ -0.98
LINC02539-202ENST00000419220 MYBBP1AQ9BQG0 1328 aaKnown RBP8.94□□□□□ -0.98
LINC02539-202ENST00000419220 PCDH11XQ9BZA7 1347 aa8.94□□□□□ -0.98
LINC02539-202ENST00000419220 PCDH11YQ9BZA8 1340 aa8.94□□□□□ -0.98
LINC02539-202ENST00000419220 RGS12O14924 1447 aa8.94□□□□□ -0.98
LINC02539-202ENST00000419220 WDR43Q15061 677 aaKnown RBP eCLIP8.93□□□□□ -0.98
LINC02539-202ENST00000419220 ILDR2Q71H61 639 aa8.93□□□□□ -0.98
LINC02539-202ENST00000419220 GPIHBP1Q8IV16 184 aa8.93□□□□□ -0.98
LINC02539-202ENST00000419220 DDX54Q8TDD1 881 aaKnown RBP8.93□□□□□ -0.98
LINC02539-202ENST00000419220 EYA1Q99502 592 aa8.93□□□□□ -0.98
LINC02539-202ENST00000419220 PARP4Q9UKK3 1724 aaKnown RBP8.92□□□□□ -0.98
LINC02539-202ENST00000419220 SULT6B1Q6IMI4 303 aa8.92□□□□□ -0.98
LINC02539-202ENST00000419220 IFNL2Q8IZJ0 200 aa8.92□□□□□ -0.98
LINC02539-202ENST00000419220 PARD3Q8TEW0 1356 aa8.91□□□□□ -0.98
LINC02539-202ENST00000419220 IGSF1Q8N6C5 1336 aa8.91□□□□□ -0.98
LINC02539-202ENST00000419220 ZMYND10O75800 440 aa8.91□□□□□ -0.98
LINC02539-202ENST00000419220 FCHSD2O94868 740 aa8.91□□□□□ -0.98
LINC02539-202ENST00000419220 U2AF1L5P0DN76 240 aaPredicted RBP8.91□□□□□ -0.98
LINC02539-202ENST00000419220 IL13P35225 146 aa8.91□□□□□ -0.98
LINC02539-202ENST00000419220 U2AF1Q01081 240 aaKnown RBP eCLIP8.91□□□□□ -0.98
LINC02539-202ENST00000419220 ZNF787Q6DD87 383 aa8.91□□□□□ -0.98
LINC02539-202ENST00000419220 GAS2L2Q8NHY3 880 aa8.91□□□□□ -0.98
LINC02539-202ENST00000419220 DDX12PQ92771 950 aa8.91□□□□□ -0.98
LINC02539-202ENST00000419220 PRKRIP1Q9H875 184 aaPredicted RBP8.91□□□□□ -0.98
LINC02539-202ENST00000419220 RABGEF1Q9UJ41 708 aa8.91□□□□□ -0.98
LINC02539-202ENST00000419220 TNS2Q63HR2 1409 aa8.9□□□□□ -0.98
LINC02539-202ENST00000419220 MAPK8IP3Q9UPT6 1336 aa8.9□□□□□ -0.98
LINC02539-202ENST00000419220 BRWD3Q6RI45 1802 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms