RNA–Protein interactions for RNA: ENST00000419023.2

VPS45-203, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 3

Gene VPS45, Length 977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-203ENST00000419023 NOVA2Q9UNW9 492 aaKnown RBP9.48□□□□□ -0.89
VPS45-203ENST00000419023 MAGI1Q96QZ7 1491 aaPredicted RBP9.47□□□□□ -0.89
VPS45-203ENST00000419023 RAD54L2Q9Y4B4 1467 aa9.47□□□□□ -0.89
VPS45-203ENST00000419023 ATG7O95352 703 aa9.47□□□□□ -0.89
VPS45-203ENST00000419023 SEC13P55735 322 aa9.47□□□□□ -0.89
VPS45-203ENST00000419023 A6NJY4 79 aa9.46□□□□□ -0.9
VPS45-203ENST00000419023 PPP1R15AO75807 674 aaPredicted RBP9.46□□□□□ -0.9
VPS45-203ENST00000419023 RHOQP17081 205 aa9.46□□□□□ -0.9
VPS45-203ENST00000419023 POU4F2Q12837 409 aa9.46□□□□□ -0.9
VPS45-203ENST00000419023 TNS4Q8IZW8 715 aa9.46□□□□□ -0.9
VPS45-203ENST00000419023 TSEN2Q8NCE0 465 aaKnown RBP9.46□□□□□ -0.9
VPS45-203ENST00000419023 FAM200AQ8TCP9 573 aa9.46□□□□□ -0.9
VPS45-203ENST00000419023 GRIN2BQ13224 1484 aa9.46□□□□□ -0.9
VPS45-203ENST00000419023 GAPVD1Q14C86 1478 aa9.46□□□□□ -0.9
VPS45-203ENST00000419023 GTF2E1P29083 439 aaPredicted RBP9.45□□□□□ -0.9
VPS45-203ENST00000419023 TMEM214Q6NUQ4 689 aaKnown RBP9.45□□□□□ -0.9
VPS45-203ENST00000419023 ZMIZ1Q9ULJ6 1067 aa9.45□□□□□ -0.9
VPS45-203ENST00000419023 SYNJ2O15056 1496 aa9.45□□□□□ -0.9
VPS45-203ENST00000419023 CLASP1Q7Z460 1538 aa9.45□□□□□ -0.9
VPS45-203ENST00000419023 M0R2N6 131 aa9.44□□□□□ -0.9
VPS45-203ENST00000419023 LGR5O75473 907 aa9.44□□□□□ -0.9
VPS45-203ENST00000419023 ELOAQ14241 798 aaKnown RBP9.44□□□□□ -0.9
VPS45-203ENST00000419023 MTFR1Q15390 333 aa9.44□□□□□ -0.9
VPS45-203ENST00000419023 STK32AQ8WU08 396 aa9.44□□□□□ -0.9
VPS45-203ENST00000419023 HINFPQ9BQA5 517 aa9.44□□□□□ -0.9
VPS45-203ENST00000419023 WDR97A6NE52 1622 aa9.44□□□□□ -0.9
VPS45-203ENST00000419023 ACIN1Q9UKV3 1341 aaKnown RBP9.43□□□□□ -0.9
VPS45-203ENST00000419023 PHKA2P46019 1235 aa9.43□□□□□ -0.9
VPS45-203ENST00000419023 EPHA4P54764 986 aa9.43□□□□□ -0.9
VPS45-203ENST00000419023 TBCELQ5QJ74 424 aa9.43□□□□□ -0.9
VPS45-203ENST00000419023 PPARGC1BQ86YN6 1023 aaKnown RBP9.43□□□□□ -0.9
VPS45-203ENST00000419023 USP3Q9Y6I4 520 aa9.43□□□□□ -0.9
VPS45-203ENST00000419023 SPATA31C2B4DYI2 1134 aa9.42□□□□□ -0.9
VPS45-203ENST00000419023 CDK2AP1O14519 115 aa9.42□□□□□ -0.9
VPS45-203ENST00000419023 PTSQ03393 145 aa9.42□□□□□ -0.9
VPS45-203ENST00000419023 GNASQ5JWF2 1037 aa9.42□□□□□ -0.9
VPS45-203ENST00000419023 NBPF10Q6P3W6 841 aaKnown RBP9.42□□□□□ -0.9
VPS45-203ENST00000419023 TAS1R3Q7RTX0 852 aa9.42□□□□□ -0.9
VPS45-203ENST00000419023 NBPF15Q8N660 670 aa9.42□□□□□ -0.9
VPS45-203ENST00000419023 SCHIP1Q9P0W5 487 aaPredicted RBP9.42□□□□□ -0.9
VPS45-203ENST00000419023 C4orf17Q53FE4 359 aa9.41□□□□□ -0.9
VPS45-203ENST00000419023 SLC9A9Q8IVB4 645 aa9.41□□□□□ -0.9
VPS45-203ENST00000419023 RHBDD1Q8TEB9 315 aa9.41□□□□□ -0.9
VPS45-203ENST00000419023 IQSEC3Q9UPP2 1182 aaPredicted RBP9.41□□□□□ -0.9
VPS45-203ENST00000419023 FGD5Q6ZNL6 1462 aa9.4□□□□□ -0.9
VPS45-203ENST00000419023 FOXK2Q01167 660 aa9.4□□□□□ -0.9
VPS45-203ENST00000419023 TMEM164Q5U3C3 297 aa9.4□□□□□ -0.9
VPS45-203ENST00000419023 TSPAN10Q9H1Z9 355 aaPredicted RBP9.4□□□□□ -0.9
VPS45-203ENST00000419023 CABP1Q9NZU7 370 aa9.4□□□□□ -0.9
VPS45-203ENST00000419023 SENP3-EIF4A1A0A087X0R7 540 aa9.39□□□□□ -0.91
VPS45-203ENST00000419023 PLA2G4AP47712 749 aa9.39□□□□□ -0.91
VPS45-203ENST00000419023 NIFKQ9BYG3 293 aaKnown RBP9.39□□□□□ -0.91
VPS45-203ENST00000419023 TIMMDC1Q9NPL8 285 aa9.38□□□□□ -0.91
VPS45-203ENST00000419023 PARP3Q9Y6F1 533 aa9.38□□□□□ -0.91
VPS45-203ENST00000419023 SLC35F4A4IF30 521 aa9.37□□□□□ -0.91
VPS45-203ENST00000419023 CSB-PGBD3P0DP91 1061 aa9.37□□□□□ -0.91
VPS45-203ENST00000419023 FAM69CQ0P6D2 419 aa9.37□□□□□ -0.91
VPS45-203ENST00000419023 WDR44Q5JSH3 913 aa9.37□□□□□ -0.91
VPS45-203ENST00000419023 ZNF295-AS1Q8N0V1 137 aa9.37□□□□□ -0.91
VPS45-203ENST00000419023 CCDC155Q8N6L0 562 aa9.37□□□□□ -0.91
VPS45-203ENST00000419023 GAS2L2Q8NHY3 880 aa9.37□□□□□ -0.91
VPS45-203ENST00000419023 SCG3Q8WXD2 468 aaKnown RBP9.37□□□□□ -0.91
VPS45-203ENST00000419023 ATAD2Q6PL18 1390 aa9.37□□□□□ -0.91
VPS45-203ENST00000419023 GAS2L1Q99501 681 aaPredicted RBP9.36□□□□□ -0.91
VPS45-203ENST00000419023 C21orf2O43822 256 aa9.35□□□□□ -0.91
VPS45-203ENST00000419023 PPP1R12BO60237 982 aaPredicted RBP9.35□□□□□ -0.91
VPS45-203ENST00000419023 VEGFBP49765 207 aa9.35□□□□□ -0.91
VPS45-203ENST00000419023 SWI5Q1ZZU3 235 aa9.35□□□□□ -0.91
VPS45-203ENST00000419023 ZDHHC1Q8WTX9 485 aa9.35□□□□□ -0.91
VPS45-203ENST00000419023 AIDAQ96BJ3 306 aa9.35□□□□□ -0.91
VPS45-203ENST00000419023 NXF1Q9UBU9 619 aaKnown RBP9.35□□□□□ -0.91
VPS45-203ENST00000419023 ZNF232Q9UNY5 417 aa9.35□□□□□ -0.91
VPS45-203ENST00000419023 CARNS1A5YM72 827 aa9.34□□□□□ -0.91
VPS45-203ENST00000419023 PRMT3O60678 531 aa9.34□□□□□ -0.91
VPS45-203ENST00000419023 PPFIA3O75145 1194 aa9.34□□□□□ -0.91
VPS45-203ENST00000419023 NOS2P35228 1153 aa9.34□□□□□ -0.91
VPS45-203ENST00000419023 PSMA6P60900 246 aaKnown RBP9.34□□□□□ -0.91
VPS45-203ENST00000419023 TEAD4Q15561 434 aa9.34□□□□□ -0.91
VPS45-203ENST00000419023 SH3PXD2AQ5TCZ1 1133 aa9.34□□□□□ -0.91
VPS45-203ENST00000419023 L3MBTL2Q969R5 705 aa9.34□□□□□ -0.91
VPS45-203ENST00000419023 PRIMPOLQ96LW4 560 aa9.34□□□□□ -0.91
VPS45-203ENST00000419023 DYRK1BQ9Y463 629 aa9.34□□□□□ -0.91
VPS45-203ENST00000419023 SERTM1A2A2V5 107 aa9.33□□□□□ -0.92
VPS45-203ENST00000419023 TMEM88BA6NKF7 163 aa9.33□□□□□ -0.92
VPS45-203ENST00000419023 GPAMQ9HCL2 828 aa9.33□□□□□ -0.92
VPS45-203ENST00000419023 CHMP3Q9Y3E7 222 aa9.33□□□□□ -0.92
VPS45-203ENST00000419023 A0A1B0GTH6 734 aa9.32□□□□□ -0.92
VPS45-203ENST00000419023 IGFBP4P22692 258 aa9.32□□□□□ -0.92
VPS45-203ENST00000419023 MSX1P28360 303 aa9.32□□□□□ -0.92
VPS45-203ENST00000419023 WEE1P30291 646 aa9.32□□□□□ -0.92
VPS45-203ENST00000419023 RIPOR1Q6ZS17 1223 aa9.32□□□□□ -0.92
VPS45-203ENST00000419023 SLAIN2Q9P270 581 aa9.32□□□□□ -0.92
VPS45-203ENST00000419023 CUX1P39880 1505 aa9.31□□□□□ -0.92
VPS45-203ENST00000419023 EML1O00423 815 aa9.31□□□□□ -0.92
VPS45-203ENST00000419023 TERTO14746 1132 aaKnown RBP9.31□□□□□ -0.92
VPS45-203ENST00000419023 F11P03951 625 aa9.31□□□□□ -0.92
VPS45-203ENST00000419023 TXLNAP40222 546 aa9.31□□□□□ -0.92
VPS45-203ENST00000419023 NBPF1Q3BBV0 1214 aa9.31□□□□□ -0.92
VPS45-203ENST00000419023 RETREG2Q8NC44 543 aa9.31□□□□□ -0.92
VPS45-203ENST00000419023 CLP1Q92989 425 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms