RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 CARNS1A5YM72 827 aa8.93□□□□□ -0.98
HMGB1P49-201ENST00000418882 ATP4AP20648 1035 aa8.93□□□□□ -0.98
HMGB1P49-201ENST00000418882 TXLNAP40222 546 aa8.93□□□□□ -0.98
HMGB1P49-201ENST00000418882 GAS2L1Q99501 681 aaPredicted RBP8.93□□□□□ -0.98
HMGB1P49-201ENST00000418882 NIFKQ9BYG3 293 aaKnown RBP8.93□□□□□ -0.98
HMGB1P49-201ENST00000418882 GPAMQ9HCL2 828 aa8.93□□□□□ -0.98
HMGB1P49-201ENST00000418882 CABP1Q9NZU7 370 aa8.93□□□□□ -0.98
HMGB1P49-201ENST00000418882 RBM19Q9Y4C8 960 aaKnown RBP8.93□□□□□ -0.98
HMGB1P49-201ENST00000418882 MSX1P28360 303 aa8.92□□□□□ -0.98
HMGB1P49-201ENST00000418882 POTEAQ6S8J7 498 aa8.92□□□□□ -0.98
HMGB1P49-201ENST00000418882 GPR161Q8N6U8 529 aaKnown RBP8.92□□□□□ -0.98
HMGB1P49-201ENST00000418882 SCG3Q8WXD2 468 aaKnown RBP8.92□□□□□ -0.98
HMGB1P49-201ENST00000418882 HINFPQ9BQA5 517 aa8.92□□□□□ -0.98
HMGB1P49-201ENST00000418882 EML1O00423 815 aa8.91□□□□□ -0.98
HMGB1P49-201ENST00000418882 GTF2E1P29083 439 aaPredicted RBP8.91□□□□□ -0.98
HMGB1P49-201ENST00000418882 TEAD4Q15561 434 aa8.91□□□□□ -0.98
HMGB1P49-201ENST00000418882 DBN1Q16643 649 aa8.91□□□□□ -0.98
HMGB1P49-201ENST00000418882 NPAS3Q8IXF0 933 aa8.91□□□□□ -0.98
HMGB1P49-201ENST00000418882 L3MBTL2Q969R5 705 aa8.91□□□□□ -0.98
HMGB1P49-201ENST00000418882 ATAD2Q6PL18 1390 aa8.9□□□□□ -0.98
HMGB1P49-201ENST00000418882 ACIN1Q9UKV3 1341 aaKnown RBP8.9□□□□□ -0.98
HMGB1P49-201ENST00000418882 A0A1B0GTH6 734 aa8.9□□□□□ -0.98
HMGB1P49-201ENST00000418882 TMEM88BA6NKF7 163 aa8.9□□□□□ -0.98
HMGB1P49-201ENST00000418882 WEE1P30291 646 aa8.9□□□□□ -0.98
HMGB1P49-201ENST00000418882 NOS2P35228 1153 aa8.9□□□□□ -0.98
HMGB1P49-201ENST00000418882 TREML4Q6UXN2 200 aa8.9□□□□□ -0.98
HMGB1P49-201ENST00000418882 RUBCNLQ9H714 662 aa8.9□□□□□ -0.98
HMGB1P49-201ENST00000418882 PPP1R12BO60237 982 aaPredicted RBP8.89□□□□□ -0.99
HMGB1P49-201ENST00000418882 PPP1R15AO75807 674 aaPredicted RBP8.89□□□□□ -0.99
HMGB1P49-201ENST00000418882 WFS1O76024 890 aa8.89□□□□□ -0.99
HMGB1P49-201ENST00000418882 F11P03951 625 aa8.89□□□□□ -0.99
HMGB1P49-201ENST00000418882 VSIG8P0DPA2 414 aa8.89□□□□□ -0.99
HMGB1P49-201ENST00000418882 OCLNQ16625 522 aa8.89□□□□□ -0.99
HMGB1P49-201ENST00000418882 RIPOR1Q6ZS17 1223 aa8.89□□□□□ -0.99
HMGB1P49-201ENST00000418882 VWA5B2Q8N398 1253 aa8.89□□□□□ -0.99
HMGB1P49-201ENST00000418882 C7orf43Q8WVR3 580 aa8.89□□□□□ -0.99
HMGB1P49-201ENST00000418882 ZNF837Q96EG3 531 aaPredicted RBP8.89□□□□□ -0.99
HMGB1P49-201ENST00000418882 PRIMPOLQ96LW4 560 aa8.89□□□□□ -0.99
HMGB1P49-201ENST00000418882 PRMT3O60678 531 aa8.88□□□□□ -0.99
HMGB1P49-201ENST00000418882 PSMA6P60900 246 aaKnown RBP8.88□□□□□ -0.99
HMGB1P49-201ENST00000418882 UBAP2LQ14157 1087 aaKnown RBP8.88□□□□□ -0.99
HMGB1P49-201ENST00000418882 NANOS1Q8WY41 292 aaKnown RBP8.88□□□□□ -0.99
HMGB1P49-201ENST00000418882 AIDAQ96BJ3 306 aa8.88□□□□□ -0.99
HMGB1P49-201ENST00000418882 C2orf49Q9BVC5 232 aaPredicted RBP8.88□□□□□ -0.99
HMGB1P49-201ENST00000418882 SERTM1A2A2V5 107 aa8.87□□□□□ -0.99
HMGB1P49-201ENST00000418882 CDC14CA4D256 554 aa8.87□□□□□ -0.99
HMGB1P49-201ENST00000418882 IGFBP4P22692 258 aa8.87□□□□□ -0.99
HMGB1P49-201ENST00000418882 TRIM22Q8IYM9 498 aa8.87□□□□□ -0.99
HMGB1P49-201ENST00000418882 CHMP7Q8WUX9 453 aaPredicted RBP8.87□□□□□ -0.99
HMGB1P49-201ENST00000418882 ZNF232Q9UNY5 417 aa8.87□□□□□ -0.99
HMGB1P49-201ENST00000418882 HIRAP54198 1017 aaPredicted RBP8.86□□□□□ -0.99
HMGB1P49-201ENST00000418882 FKBP5Q13451 457 aaPredicted RBP8.86□□□□□ -0.99
HMGB1P49-201ENST00000418882 SWI5Q1ZZU3 235 aa8.86□□□□□ -0.99
HMGB1P49-201ENST00000418882 HCN4Q9Y3Q4 1203 aa8.86□□□□□ -0.99
HMGB1P49-201ENST00000418882 GPR25O00155 361 aa8.85□□□□□ -0.99
HMGB1P49-201ENST00000418882 GMPRP36959 345 aa8.85□□□□□ -0.99
HMGB1P49-201ENST00000418882 KRT76Q01546 638 aa8.85□□□□□ -0.99
HMGB1P49-201ENST00000418882 CAPN12Q6ZSI9 719 aa8.85□□□□□ -0.99
HMGB1P49-201ENST00000418882 SLC16A10Q8TF71 515 aa8.85□□□□□ -0.99
HMGB1P49-201ENST00000418882 ZIC5Q96T25 663 aa8.85□□□□□ -0.99
HMGB1P49-201ENST00000418882 CRISPLD1Q9H336 500 aa8.85□□□□□ -0.99
HMGB1P49-201ENST00000418882 ZDHHC3Q9NYG2 299 aa8.85□□□□□ -0.99
HMGB1P49-201ENST00000418882 HCN2Q9UL51 889 aa8.85□□□□□ -0.99
HMGB1P49-201ENST00000418882 SCNN1AP37088 669 aa8.84□□□□□ -0.99
HMGB1P49-201ENST00000418882 NBPF1Q3BBV0 1214 aa8.84□□□□□ -0.99
HMGB1P49-201ENST00000418882 STAG2Q8N3U4 1231 aa8.84□□□□□ -0.99
HMGB1P49-201ENST00000418882 CLP1Q92989 425 aaKnown RBP8.84□□□□□ -0.99
HMGB1P49-201ENST00000418882 GTPBP3Q969Y2 492 aaKnown RBP8.84□□□□□ -0.99
HMGB1P49-201ENST00000418882 PHACTR1Q9C0D0 580 aa8.84□□□□□ -0.99
HMGB1P49-201ENST00000418882 NUCKS1Q9H1E3 243 aaKnown RBP8.84□□□□□ -0.99
HMGB1P49-201ENST00000418882 GAS6Q14393 721 aa8.83□□□□□ -1
HMGB1P49-201ENST00000418882 RNFT1Q5M7Z0 435 aa8.83□□□□□ -1
HMGB1P49-201ENST00000418882 RETREG2Q8NC44 543 aa8.83□□□□□ -1
HMGB1P49-201ENST00000418882 IRF7Q92985 503 aa8.83□□□□□ -1
HMGB1P49-201ENST00000418882 A0A1W2PNR3 127 aa8.82□□□□□ -1
HMGB1P49-201ENST00000418882 SV2AQ7L0J3 742 aa8.82□□□□□ -1
HMGB1P49-201ENST00000418882 ALDH16A1Q8IZ83 802 aa8.82□□□□□ -1
HMGB1P49-201ENST00000418882 C1orf216Q8TAB5 229 aa8.82□□□□□ -1
HMGB1P49-201ENST00000418882 NGLY1Q96IV0 654 aa8.82□□□□□ -1
HMGB1P49-201ENST00000418882 CXXC1Q9P0U4 656 aaPredicted RBP8.82□□□□□ -1
HMGB1P49-201ENST00000418882 QTRT2Q9H974 415 aaKnown RBP8.81□□□□□ -1
HMGB1P49-201ENST00000418882 FOXO3O43524 673 aa8.8□□□□□ -1
HMGB1P49-201ENST00000418882 TATP17735 454 aaPredicted RBP8.8□□□□□ -1
HMGB1P49-201ENST00000418882 ARSJQ5FYB0 599 aaPredicted RBP8.8□□□□□ -1
HMGB1P49-201ENST00000418882 ZNF280CQ8ND82 737 aa8.8□□□□□ -1
HMGB1P49-201ENST00000418882 HSH2DQ96JZ2 352 aa8.8□□□□□ -1
HMGB1P49-201ENST00000418882 MKNK1Q9BUB5 465 aa8.8□□□□□ -1
HMGB1P49-201ENST00000418882 COL25A1Q9BXS0 654 aaPredicted RBP8.8□□□□□ -1
HMGB1P49-201ENST00000418882 NDFIP2Q9NV92 336 aa8.8□□□□□ -1
HMGB1P49-201ENST00000418882 H7C1W4 665 aa8.79□□□□□ -1
HMGB1P49-201ENST00000418882 CSB-PGBD3P0DP91 1061 aa8.79□□□□□ -1
HMGB1P49-201ENST00000418882 ATP2B4P23634 1241 aa8.79□□□□□ -1
HMGB1P49-201ENST00000418882 PHLDB3Q6NSJ2 640 aa8.79□□□□□ -1
HMGB1P49-201ENST00000418882 PGBD3Q8N328 593 aa8.79□□□□□ -1
HMGB1P49-201ENST00000418882 RHPN1Q8TCX5 695 aa8.79□□□□□ -1
HMGB1P49-201ENST00000418882 ZCCHC2Q9C0B9 1178 aaKnown RBP8.79□□□□□ -1
HMGB1P49-201ENST00000418882 BNIP3LO60238 219 aa8.78□□□□□ -1
HMGB1P49-201ENST00000418882 C1orf53Q5VUE5 145 aa8.78□□□□□ -1
HMGB1P49-201ENST00000418882 LRRC69Q6ZNQ3 347 aa8.78□□□□□ -1
HMGB1P49-201ENST00000418882 BICDL1Q6ZP65 573 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms