RNA–Protein interactions for RNA: ENST00000417440.2

CASP4-202, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-202ENST00000417440 C4BP0C0L5 1744 aa9.96□□□□□ -0.81
CASP4-202ENST00000417440 TRIM26Q12899 539 aaPredicted RBP9.96□□□□□ -0.82
CASP4-202ENST00000417440 TRAPPC3LQ5T215 181 aa9.96□□□□□ -0.82
CASP4-202ENST00000417440 FBXO22Q8NEZ5 403 aa9.96□□□□□ -0.82
CASP4-202ENST00000417440 BMP2KQ9NSY1 1161 aaPredicted RBP9.96□□□□□ -0.82
CASP4-202ENST00000417440 A0A0G2JLW4 131 aa9.95□□□□□ -0.82
CASP4-202ENST00000417440 PCGF6Q9BYE7 350 aa9.95□□□□□ -0.82
CASP4-202ENST00000417440 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.95□□□□□ -0.825e-8■■■■□ 20
CASP4-202ENST00000417440 BCS1LQ9Y276 419 aa9.95□□□□□ -0.82
CASP4-202ENST00000417440 RTCBQ9Y3I0 505 aaKnown RBP9.95□□□□□ -0.82
CASP4-202ENST00000417440 KIF20BQ96Q89 1820 aa9.94□□□□□ -0.82
CASP4-202ENST00000417440 TOGARAM1Q9Y4F4 1720 aa9.94□□□□□ -0.82
CASP4-202ENST00000417440 GOLGA2Q08379 1002 aa9.94□□□□□ -0.82
CASP4-202ENST00000417440 ARHGAP27Q6ZUM4 889 aa9.94□□□□□ -0.82
CASP4-202ENST00000417440 CEP350Q5VT06 3117 aa9.93□□□□□ -0.82
CASP4-202ENST00000417440 PTCD1O75127 700 aaKnown RBP9.93□□□□□ -0.82
CASP4-202ENST00000417440 HSPA6P17066 643 aa9.93□□□□□ -0.82
CASP4-202ENST00000417440 RFC4P35249 363 aa9.93□□□□□ -0.82
CASP4-202ENST00000417440 CABP4P57796 275 aa9.93□□□□□ -0.82
CASP4-202ENST00000417440 PLEKHO1Q53GL0 409 aaPredicted RBP9.93□□□□□ -0.82
CASP4-202ENST00000417440 IFFO2Q5TF58 517 aa9.93□□□□□ -0.82
CASP4-202ENST00000417440 ZNF530Q6P9A1 599 aaPredicted RBP9.93□□□□□ -0.82
CASP4-202ENST00000417440 NLGN1Q8N2Q7 840 aa9.93□□□□□ -0.82
CASP4-202ENST00000417440 ARHGEF1Q92888 912 aaKnown RBP9.93□□□□□ -0.82
CASP4-202ENST00000417440 SLC4A9Q96Q91 983 aa9.93□□□□□ -0.82
CASP4-202ENST00000417440 NCAPD2Q15021 1401 aa9.92□□□□□ -0.82
CASP4-202ENST00000417440 ADCY9O60503 1353 aa9.92□□□□□ -0.82
CASP4-202ENST00000417440 ERVV-2B6SEH9 535 aa9.92□□□□□ -0.82
CASP4-202ENST00000417440 DCAF5Q96JK2 942 aa9.92□□□□□ -0.82
CASP4-202ENST00000417440 PANK3Q9H999 370 aa9.92□□□□□ -0.82
CASP4-202ENST00000417440 PARP3Q9Y6F1 533 aa9.92□□□□□ -0.82
CASP4-202ENST00000417440 KIF3CO14782 793 aa9.91□□□□□ -0.82
CASP4-202ENST00000417440 GABBR2O75899 941 aa9.91□□□□□ -0.82
CASP4-202ENST00000417440 FCHSD2O94868 740 aa9.91□□□□□ -0.82
CASP4-202ENST00000417440 HSP90AB1P08238 724 aaKnown RBP9.91□□□□□ -0.82
CASP4-202ENST00000417440 GYS1P13807 737 aa9.91□□□□□ -0.82
CASP4-202ENST00000417440 DPEP1P16444 411 aa9.91□□□□□ -0.82
CASP4-202ENST00000417440 MTHFSP49914 203 aa9.91□□□□□ -0.82
CASP4-202ENST00000417440 MKRN3Q13064 507 aaKnown RBP9.91□□□□□ -0.82
CASP4-202ENST00000417440 C1orf141Q5JVX7 400 aa9.91□□□□□ -0.82
CASP4-202ENST00000417440 CCDC87Q9NVE4 849 aa9.91□□□□□ -0.82
CASP4-202ENST00000417440 ITGB4P16144 1822 aa9.91□□□□□ -0.82
CASP4-202ENST00000417440 TAF1LQ8IZX4 1826 aa9.91□□□□□ -0.82
CASP4-202ENST00000417440 PKD1L3Q7Z443 1732 aa9.9□□□□□ -0.82
CASP4-202ENST00000417440 RPS6KA4O75676 772 aa9.9□□□□□ -0.82
CASP4-202ENST00000417440 HSPA5P11021 654 aaKnown RBP9.9□□□□□ -0.82
CASP4-202ENST00000417440 TGFB2P61812 414 aa9.9□□□□□ -0.82
CASP4-202ENST00000417440 MORC1Q86VD1 984 aa9.9□□□□□ -0.82
CASP4-202ENST00000417440 AEBP1Q8IUX7 1158 aa9.9□□□□□ -0.82
CASP4-202ENST00000417440 NFATC2IPQ8NCF5 419 aa9.9□□□□□ -0.82
CASP4-202ENST00000417440 SRP68Q9UHB9 627 aaKnown RBP9.9□□□□□ -0.82
CASP4-202ENST00000417440 PXDNLA1KZ92 1463 aa9.9□□□□□ -0.83
CASP4-202ENST00000417440 AMOTQ4VCS5 1084 aa9.89□□□□□ -0.83
CASP4-202ENST00000417440 RC3H1Q5TC82 1133 aaKnown RBP9.89□□□□□ -0.83
CASP4-202ENST00000417440 SULT6B1Q6IMI4 303 aa9.89□□□□□ -0.83
CASP4-202ENST00000417440 UBR3Q6ZT12 1888 aa9.89□□□□□ -0.83
CASP4-202ENST00000417440 KDRP35968 1356 aa9.88□□□□□ -0.83
CASP4-202ENST00000417440 CNTNAP4Q9C0A0 1308 aa9.88□□□□□ -0.83
CASP4-202ENST00000417440 ATMINO43313 823 aaPredicted RBP9.88□□□□□ -0.83
CASP4-202ENST00000417440 CRKLP46109 303 aaKnown RBP9.88□□□□□ -0.83
CASP4-202ENST00000417440 EIF4G2P78344 907 aaKnown RBP eCLIP9.88□□□□□ -0.83
CASP4-202ENST00000417440 ASTLQ6HA08 431 aaPredicted RBP9.88□□□□□ -0.83
CASP4-202ENST00000417440 NMRK2Q9NPI5 230 aa9.88□□□□□ -0.83
CASP4-202ENST00000417440 TIMELESSQ9UNS1 1208 aa9.88□□□□□ -0.83
CASP4-202ENST00000417440 TRIM35Q9UPQ4 493 aa9.88□□□□□ -0.83
CASP4-202ENST00000417440 CICQ96RK0 1608 aaPredicted RBP9.88□□□□□ -0.83
CASP4-202ENST00000417440 MAP2P11137 1827 aaKnown RBP9.87□□□□□ -0.83
CASP4-202ENST00000417440 PPP1R37O75864 691 aa9.87□□□□□ -0.83
CASP4-202ENST00000417440 C9orf131Q5VYM1 1079 aa9.87□□□□□ -0.83
CASP4-202ENST00000417440 C16orf71Q8IYS4 520 aaPredicted RBP9.87□□□□□ -0.83
CASP4-202ENST00000417440 MS4A4AQ96JQ5 239 aa9.87□□□□□ -0.83
CASP4-202ENST00000417440 KDM6AO15550 1401 aaPredicted RBP9.87□□□□□ -0.83
CASP4-202ENST00000417440 KCNA3P22001 575 aa9.86□□□□□ -0.83
CASP4-202ENST00000417440 CHRNA5P30532 468 aa9.86□□□□□ -0.83
CASP4-202ENST00000417440 ATN1P54259 1190 aaPredicted RBP9.86□□□□□ -0.83
CASP4-202ENST00000417440 CNGB1Q14028 1251 aaPredicted RBP9.86□□□□□ -0.83
CASP4-202ENST00000417440 C10orf71Q711Q0 1435 aa9.86□□□□□ -0.83
CASP4-202ENST00000417440 PIM2Q9P1W9 311 aa9.86□□□□□ -0.83
CASP4-202ENST00000417440 ZPR1O75312 459 aa9.85□□□□□ -0.83
CASP4-202ENST00000417440 TOMM70O94826 608 aa9.85□□□□□ -0.83
CASP4-202ENST00000417440 APLP1P51693 650 aa9.85□□□□□ -0.83
CASP4-202ENST00000417440 DDR1Q08345 913 aa9.85□□□□□ -0.83
CASP4-202ENST00000417440 SLC39A6Q13433 755 aa9.85□□□□□ -0.83
CASP4-202ENST00000417440 DALRD3Q5D0E6 543 aaKnown RBP9.85□□□□□ -0.83
CASP4-202ENST00000417440 USPL1Q5W0Q7 1092 aa9.85□□□□□ -0.83
CASP4-202ENST00000417440 DNAJC10Q8IXB1 793 aa9.85□□□□□ -0.83
CASP4-202ENST00000417440 LGR6Q9HBX8 967 aa9.85□□□□□ -0.83
CASP4-202ENST00000417440 RNF181Q9P0P0 153 aa9.85□□□□□ -0.83
CASP4-202ENST00000417440 KNSTRNQ9Y448 316 aa9.85□□□□□ -0.83
CASP4-202ENST00000417440 USP42Q9H9J4 1324 aaKnown RBP9.84□□□□□ -0.83
CASP4-202ENST00000417440 HMOX1P09601 288 aa9.84□□□□□ -0.83
CASP4-202ENST00000417440 IL13P35225 146 aa9.84□□□□□ -0.83
CASP4-202ENST00000417440 HTRA3P83110 453 aa9.84□□□□□ -0.83
CASP4-202ENST00000417440 INTS5Q6P9B9 1019 aaKnown RBP9.84□□□□□ -0.83
CASP4-202ENST00000417440 ANKRD26Q9UPS8 1709 aa9.84□□□□□ -0.83
CASP4-202ENST00000417440 AKAP4Q5JQC9 854 aa9.83□□□□□ -0.84
CASP4-202ENST00000417440 IER5LQ5T953 404 aa9.83□□□□□ -0.84
CASP4-202ENST00000417440 RRAGCQ9HB90 399 aa9.83□□□□□ -0.84
CASP4-202ENST00000417440 N4BP2Q86UW6 1770 aaPredicted RBP9.83□□□□□ -0.84
CASP4-202ENST00000417440 POLRMTO00411 1230 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms