RNA–Protein interactions for RNA: ENST00000417226.6

HMCES-203, Transcript of 5-hydroxymethylcytosine binding, ES cell specific, humanhuman

TSL 1 (best) BASIC

Gene HMCES, Length 1,490 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCES-203ENST00000417226 PDGFDQ9GZP0 370 aaPredicted RBP27.91■■■□□ 2.06
HMCES-203ENST00000417226 PHF14O94880 888 aa27.9■■■□□ 2.06
HMCES-203ENST00000417226 CCDC87Q9NVE4 849 aa27.9■■■□□ 2.06
HMCES-203ENST00000417226 INTS5Q6P9B9 1019 aaKnown RBP27.89■■■□□ 2.06
HMCES-203ENST00000417226 SMIM5Q71RC9 77 aa27.89■■■□□ 2.06
HMCES-203ENST00000417226 GIGYF1O75420 1035 aaPredicted RBP27.89■■■□□ 2.05
HMCES-203ENST00000417226 WDR63Q8IWG1 891 aa27.89■■■□□ 2.05
HMCES-203ENST00000417226 USP16Q9Y5T5 823 aa27.89■■■□□ 2.05
HMCES-203ENST00000417226 IL16Q14005 1332 aa27.88■■■□□ 2.05
HMCES-203ENST00000417226 RTCBQ9Y3I0 505 aaKnown RBP27.88■■■□□ 2.05
HMCES-203ENST00000417226 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.87■■■□□ 2.05
HMCES-203ENST00000417226 ZBTB1Q9Y2K1 713 aa27.87■■■□□ 2.05
HMCES-203ENST00000417226 C4AP0C0L4 1744 aa27.86■■■□□ 2.05
HMCES-203ENST00000417226 SSFA2P28290 1259 aa27.86■■■□□ 2.05
HMCES-203ENST00000417226 KRT24Q2M2I5 525 aa27.86■■■□□ 2.05
HMCES-203ENST00000417226 TSR2Q969E8 191 aaKnown RBP27.86■■■□□ 2.05
HMCES-203ENST00000417226 SRCAPQ6ZRS2 3230 aa27.86■■■□□ 2.05
HMCES-203ENST00000417226 ZNF521Q96K83 1311 aa27.86■■■□□ 2.05
HMCES-203ENST00000417226 MSH5O43196 834 aa27.85■■■□□ 2.05
HMCES-203ENST00000417226 RPS6KA4O75676 772 aa27.85■■■□□ 2.05
HMCES-203ENST00000417226 COL23A1Q86Y22 540 aaPredicted RBP27.85■■■□□ 2.05
HMCES-203ENST00000417226 A1BGP04217 495 aa27.84■■■□□ 2.05
HMCES-203ENST00000417226 CANXP27824 592 aaKnown RBP27.84■■■□□ 2.05
HMCES-203ENST00000417226 FLAD1Q8NFF5 587 aa27.84■■■□□ 2.05
HMCES-203ENST00000417226 SOS1Q07889 1333 aaPredicted RBP27.82■■■□□ 2.04
HMCES-203ENST00000417226 ZBTB7AO95365 584 aa27.81■■■□□ 2.04
HMCES-203ENST00000417226 ADRA2BP18089 450 aa27.81■■■□□ 2.04
HMCES-203ENST00000417226 PIP4K2AP48426 406 aaPredicted RBP27.81■■■□□ 2.04
HMCES-203ENST00000417226 TRAPPC3LQ5T215 181 aa27.81■■■□□ 2.04
HMCES-203ENST00000417226 SPINK5Q9NQ38 1064 aaPredicted RBP27.81■■■□□ 2.04
HMCES-203ENST00000417226 FANCIQ9NVI1 1328 aa27.81■■■□□ 2.04
HMCES-203ENST00000417226 HNRNPUQ00839 825 aaKnown RBP eCLIP27.8■■■□□ 2.04
HMCES-203ENST00000417226 COL15A1P39059 1388 aa27.8■■■□□ 2.04
HMCES-203ENST00000417226 ZNF330Q9Y3S2 320 aaPredicted RBP27.79■■■□□ 2.04
HMCES-203ENST00000417226 EIF2S2P20042 333 aaKnown RBP27.78■■■□□ 2.04
HMCES-203ENST00000417226 DUSP27Q5VZP5 1158 aa27.78■■■□□ 2.04
HMCES-203ENST00000417226 ARHGEF1Q92888 912 aaKnown RBP27.78■■■□□ 2.04
HMCES-203ENST00000417226 MYH16Q9H6N6 1097 aa27.77■■■□□ 2.04
HMCES-203ENST00000417226 RFC4P35249 363 aa27.76■■■□□ 2.04
HMCES-203ENST00000417226 GOLGA2Q08379 1002 aa27.76■■■□□ 2.04
HMCES-203ENST00000417226 C8orf58Q8NAV2 365 aa27.76■■■□□ 2.04
HMCES-203ENST00000417226 NECTIN2Q92692 538 aa27.76■■■□□ 2.04
HMCES-203ENST00000417226 ELL2O00472 640 aaPredicted RBP27.76■■■□□ 2.03
HMCES-203ENST00000417226 HOXB7P09629 217 aa27.76■■■□□ 2.03
HMCES-203ENST00000417226 IL6STP40189 918 aaPredicted RBP27.76■■■□□ 2.03
HMCES-203ENST00000417226 EIF5P55010 431 aaKnown RBP27.76■■■□□ 2.03
HMCES-203ENST00000417226 SLC16A10Q8TF71 515 aa27.76■■■□□ 2.03
HMCES-203ENST00000417226 MTFR1LQ9H019 292 aa27.76■■■□□ 2.03
HMCES-203ENST00000417226 NBPF26B4DH59 902 aa27.75■■■□□ 2.03
HMCES-203ENST00000417226 NBPF10Q6P3W6 841 aaKnown RBP27.75■■■□□ 2.03
HMCES-203ENST00000417226 NBPF15Q8N660 670 aa27.75■■■□□ 2.03
HMCES-203ENST00000417226 ATF5Q9Y2D1 282 aaPredicted RBP27.74■■■□□ 2.03
HMCES-203ENST00000417226 HDGFL1Q5TGJ6 251 aa27.73■■■□□ 2.03
HMCES-203ENST00000417226 MSL1Q68DK7 614 aa27.73■■■□□ 2.03
HMCES-203ENST00000417226 NPM2Q86SE8 214 aaKnown RBP27.73■■■□□ 2.03
HMCES-203ENST00000417226 TSPYL6Q8N831 410 aa27.72■■■□□ 2.03
HMCES-203ENST00000417226 SRP68Q9UHB9 627 aaKnown RBP27.72■■■□□ 2.03
HMCES-203ENST00000417226 COL24A1Q17RW2 1714 aa27.72■■■□□ 2.03
HMCES-203ENST00000417226 ERBB4Q15303 1308 aa27.72■■■□□ 2.03
HMCES-203ENST00000417226 SCN7AQ01118 1682 aa27.71■■■□□ 2.03
HMCES-203ENST00000417226 E9PSI1 815 aa27.71■■■□□ 2.03
HMCES-203ENST00000417226 MYL6BP14649 208 aa27.71■■■□□ 2.03
HMCES-203ENST00000417226 SPON1Q9HCB6 807 aa27.71■■■□□ 2.03
HMCES-203ENST00000417226 LRP5O75197 1615 aa27.71■■■□□ 2.03
HMCES-203ENST00000417226 USP42Q9H9J4 1324 aaKnown RBP27.71■■■□□ 2.03
HMCES-203ENST00000417226 A0A087WZG4 1122 aa27.7■■■□□ 2.03
HMCES-203ENST00000417226 CDCA7LQ96GN5 454 aa27.7■■■□□ 2.03
HMCES-203ENST00000417226 ARXQ96QS3 562 aa27.7■■■□□ 2.03
HMCES-203ENST00000417226 ZPR1O75312 459 aa27.7■■■□□ 2.02
HMCES-203ENST00000417226 BCORQ6W2J9 1755 aa27.69■■■□□ 2.02
HMCES-203ENST00000417226 EXOSC9Q06265 439 aaKnown RBP27.69■■■□□ 2.02
HMCES-203ENST00000417226 TWISTNBQ3B726 338 aaPredicted RBP27.69■■■□□ 2.02
HMCES-203ENST00000417226 ANXA1P04083 346 aa27.68■■■□□ 2.02
HMCES-203ENST00000417226 SLFN5Q08AF3 891 aa27.68■■■□□ 2.02
HMCES-203ENST00000417226 PDIA6Q15084 440 aa27.68■■■□□ 2.02
HMCES-203ENST00000417226 PROSER3Q2NL68 480 aa27.68■■■□□ 2.02
HMCES-203ENST00000417226 CHPF2Q9P2E5 772 aa27.68■■■□□ 2.02
HMCES-203ENST00000417226 NARFQ9UHQ1 456 aa27.68■■■□□ 2.02
HMCES-203ENST00000417226 TBC1D2BQ9UPU7 963 aa27.68■■■□□ 2.02
HMCES-203ENST00000417226 GYS1P13807 737 aa27.67■■■□□ 2.02
HMCES-203ENST00000417226 USPL1Q5W0Q7 1092 aa27.67■■■□□ 2.02
HMCES-203ENST00000417226 DZIP3Q86Y13 1208 aaKnown RBP27.66■■■□□ 2.02
HMCES-203ENST00000417226 DDX21Q9NR30 783 aaKnown RBP eCLIP27.65■■■□□ 2.02
HMCES-203ENST00000417226 PTGER2P43116 358 aa27.64■■■□□ 2.02
HMCES-203ENST00000417226 ZBED9Q6R2W3 1325 aa27.64■■■□□ 2.02
HMCES-203ENST00000417226 FKBP8Q14318 412 aa27.64■■■□□ 2.01
HMCES-203ENST00000417226 DBF4Q9UBU7 674 aaPredicted RBP27.64■■■□□ 2.01
HMCES-203ENST00000417226 POLD1P28340 1107 aa27.63■■■□□ 2.01
HMCES-203ENST00000417226 LRP10Q7Z4F1 713 aa27.63■■■□□ 2.01
HMCES-203ENST00000417226 SGIP1Q9BQI5 828 aa27.63■■■□□ 2.01
HMCES-203ENST00000417226 CCDC30Q5VVM6 783 aa27.62■■■□□ 2.01
HMCES-203ENST00000417226 NLGN1Q8N2Q7 840 aa27.62■■■□□ 2.01
HMCES-203ENST00000417226 CAMTA2O94983 1202 aa27.61■■■□□ 2.01
HMCES-203ENST00000417226 TTLL7Q6ZT98 887 aa27.61■■■□□ 2.01
HMCES-203ENST00000417226 CHMP4AQ9BY43 222 aa27.61■■■□□ 2.01
HMCES-203ENST00000417226 BCL2L12Q9HB09 334 aa27.61■■■□□ 2.01
HMCES-203ENST00000417226 VAMP4O75379 141 aa27.6■■■□□ 2.01
HMCES-203ENST00000417226 KIF6Q6ZMV9 814 aa27.6■■■□□ 2.01
HMCES-203ENST00000417226 TCERG1O14776 1098 aaKnown RBP27.59■■■□□ 2.01
HMCES-203ENST00000417226 TRMT2AQ8IZ69 625 aaKnown RBP27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms