RNA–Protein interactions for RNA: ENST00000416319.5

FAM3A-207, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-207ENST00000416319 MYH16Q9H6N6 1097 aa25.71■■□□□ 1.71
FAM3A-207ENST00000416319 USP16Q9Y5T5 823 aa25.71■■□□□ 1.71
FAM3A-207ENST00000416319 SOS1Q07889 1333 aaPredicted RBP25.7■■□□□ 1.71
FAM3A-207ENST00000416319 PRAMEF22A3QJZ6 481 aa25.7■■□□□ 1.7
FAM3A-207ENST00000416319 GNPATO15228 680 aa25.7■■□□□ 1.7
FAM3A-207ENST00000416319 ADRA2BP18089 450 aa25.7■■□□□ 1.7
FAM3A-207ENST00000416319 RTCBQ9Y3I0 505 aaKnown RBP25.7■■□□□ 1.7
FAM3A-207ENST00000416319 HNRNPUQ00839 825 aaKnown RBP eCLIP25.69■■□□□ 1.7
FAM3A-207ENST00000416319 PNPLA7Q6ZV29 1317 aa25.68■■□□□ 1.7
FAM3A-207ENST00000416319 FANCIQ9NVI1 1328 aa25.68■■□□□ 1.7
FAM3A-207ENST00000416319 E9PSI1 815 aa25.68■■□□□ 1.7
FAM3A-207ENST00000416319 TSR2Q969E8 191 aaKnown RBP25.68■■□□□ 1.7
FAM3A-207ENST00000416319 SPINK5Q9NQ38 1064 aaPredicted RBP25.68■■□□□ 1.7
FAM3A-207ENST00000416319 ZBTB1Q9Y2K1 713 aa25.67■■□□□ 1.7
FAM3A-207ENST00000416319 ERBB4Q15303 1308 aa25.66■■□□□ 1.7
FAM3A-207ENST00000416319 PSDA5PKW4 1024 aaPredicted RBP25.66■■□□□ 1.7
FAM3A-207ENST00000416319 CHMP4AQ9BY43 222 aa25.66■■□□□ 1.7
FAM3A-207ENST00000416319 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.65■■□□□ 1.7
FAM3A-207ENST00000416319 KRT24Q2M2I5 525 aa25.65■■□□□ 1.7
FAM3A-207ENST00000416319 TRAPPC3LQ5T215 181 aa25.65■■□□□ 1.7
FAM3A-207ENST00000416319 DUSP27Q5VZP5 1158 aa25.65■■□□□ 1.7
FAM3A-207ENST00000416319 AMIGO3Q86WK7 504 aa25.65■■□□□ 1.7
FAM3A-207ENST00000416319 A1BGP04217 495 aa25.64■■□□□ 1.7
FAM3A-207ENST00000416319 IL6STP40189 918 aaPredicted RBP25.64■■□□□ 1.7
FAM3A-207ENST00000416319 EIF5P55010 431 aaKnown RBP25.64■■□□□ 1.7
FAM3A-207ENST00000416319 SLFN5Q08AF3 891 aa25.64■■□□□ 1.7
FAM3A-207ENST00000416319 QSER1Q2KHR3 1735 aa25.63■■□□□ 1.69
FAM3A-207ENST00000416319 COL23A1Q86Y22 540 aaPredicted RBP25.63■■□□□ 1.69
FAM3A-207ENST00000416319 C8orf58Q8NAV2 365 aa25.63■■□□□ 1.69
FAM3A-207ENST00000416319 SLC16A10Q8TF71 515 aa25.63■■□□□ 1.69
FAM3A-207ENST00000416319 ZBED9Q6R2W3 1325 aa25.63■■□□□ 1.69
FAM3A-207ENST00000416319 TRMT2AQ8IZ69 625 aaKnown RBP25.62■■□□□ 1.69
FAM3A-207ENST00000416319 MYH14Q7Z406 1995 aaKnown RBP25.62■■□□□ 1.69
FAM3A-207ENST00000416319 CANXP27824 592 aaKnown RBP25.61■■□□□ 1.69
FAM3A-207ENST00000416319 ARHGEF1Q92888 912 aaKnown RBP25.61■■□□□ 1.69
FAM3A-207ENST00000416319 UBR3Q6ZT12 1888 aa25.6■■□□□ 1.69
FAM3A-207ENST00000416319 A0A087WZG4 1122 aa25.6■■□□□ 1.69
FAM3A-207ENST00000416319 NBPF26B4DH59 902 aa25.6■■□□□ 1.69
FAM3A-207ENST00000416319 PHF14O94880 888 aa25.6■■□□□ 1.69
FAM3A-207ENST00000416319 NBPF10Q6P3W6 841 aaKnown RBP25.6■■□□□ 1.69
FAM3A-207ENST00000416319 NBPF15Q8N660 670 aa25.6■■□□□ 1.69
FAM3A-207ENST00000416319 LAMB4A4D0S4 1761 aa25.59■■□□□ 1.69
FAM3A-207ENST00000416319 EIF2S2P20042 333 aaKnown RBP25.59■■□□□ 1.69
FAM3A-207ENST00000416319 HDGFL1Q5TGJ6 251 aa25.59■■□□□ 1.69
FAM3A-207ENST00000416319 PDGFDQ9GZP0 370 aaPredicted RBP25.59■■□□□ 1.69
FAM3A-207ENST00000416319 COL15A1P39059 1388 aa25.58■■□□□ 1.69
FAM3A-207ENST00000416319 TWISTNBQ3B726 338 aaPredicted RBP25.58■■□□□ 1.69
FAM3A-207ENST00000416319 TSPYL6Q8N831 410 aa25.58■■□□□ 1.69
FAM3A-207ENST00000416319 CDCA7LQ96GN5 454 aa25.58■■□□□ 1.69
FAM3A-207ENST00000416319 RFC4P35249 363 aa25.57■■□□□ 1.68
FAM3A-207ENST00000416319 EXOSC9Q06265 439 aaKnown RBP25.57■■□□□ 1.68
FAM3A-207ENST00000416319 SMIM5Q71RC9 77 aa25.57■■□□□ 1.68
FAM3A-207ENST00000416319 NPM2Q86SE8 214 aaKnown RBP25.57■■□□□ 1.68
FAM3A-207ENST00000416319 CASZ1Q86V15 1759 aa25.56■■□□□ 1.68
FAM3A-207ENST00000416319 ELL2O00472 640 aaPredicted RBP25.56■■□□□ 1.68
FAM3A-207ENST00000416319 PDIA6Q15084 440 aa25.56■■□□□ 1.68
FAM3A-207ENST00000416319 MTFR1LQ9H019 292 aa25.56■■□□□ 1.68
FAM3A-207ENST00000416319 DDX21Q9NR30 783 aaKnown RBP eCLIP25.56■■□□□ 1.68
FAM3A-207ENST00000416319 TUBGCP6Q96RT7 1819 aa25.56■■□□□ 1.68
FAM3A-207ENST00000416319 MSH5O43196 834 aa25.55■■□□□ 1.68
FAM3A-207ENST00000416319 DBF4Q9UBU7 674 aaPredicted RBP25.55■■□□□ 1.68
FAM3A-207ENST00000416319 VAMP4O75379 141 aa25.54■■□□□ 1.68
FAM3A-207ENST00000416319 CCDC30Q5VVM6 783 aa25.54■■□□□ 1.68
FAM3A-207ENST00000416319 LRP10Q7Z4F1 713 aa25.54■■□□□ 1.68
FAM3A-207ENST00000416319 NARFQ9UHQ1 456 aa25.54■■□□□ 1.68
FAM3A-207ENST00000416319 USP42Q9H9J4 1324 aaKnown RBP25.54■■□□□ 1.68
FAM3A-207ENST00000416319 RGL2O15211 777 aa25.53■■□□□ 1.68
FAM3A-207ENST00000416319 PIP4K2AP48426 406 aaPredicted RBP25.53■■□□□ 1.68
FAM3A-207ENST00000416319 ZPR1O75312 459 aa25.52■■□□□ 1.68
FAM3A-207ENST00000416319 CHPF2Q9P2E5 772 aa25.52■■□□□ 1.68
FAM3A-207ENST00000416319 NECTIN2Q92692 538 aa25.51■■□□□ 1.67
FAM3A-207ENST00000416319 HYPKQ9NX55 129 aa25.51■■□□□ 1.67
FAM3A-207ENST00000416319 ZBTB7AO95365 584 aa25.5■■□□□ 1.67
FAM3A-207ENST00000416319 CT47B1P0C2W7 299 aaPredicted RBP25.5■■□□□ 1.67
FAM3A-207ENST00000416319 GYS1P13807 737 aa25.5■■□□□ 1.67
FAM3A-207ENST00000416319 MYL6BP14649 208 aa25.5■■□□□ 1.67
FAM3A-207ENST00000416319 PROSER3Q2NL68 480 aa25.5■■□□□ 1.67
FAM3A-207ENST00000416319 NLGN1Q8N2Q7 840 aa25.5■■□□□ 1.67
FAM3A-207ENST00000416319 ZNF330Q9Y3S2 320 aaPredicted RBP25.5■■□□□ 1.67
FAM3A-207ENST00000416319 DZIP3Q86Y13 1208 aaKnown RBP25.49■■□□□ 1.67
FAM3A-207ENST00000416319 ZNF428Q96B54 188 aa25.49■■□□□ 1.67
FAM3A-207ENST00000416319 SPON1Q9HCB6 807 aa25.49■■□□□ 1.67
FAM3A-207ENST00000416319 USPL1Q5W0Q7 1092 aa25.48■■□□□ 1.67
FAM3A-207ENST00000416319 SRP68Q9UHB9 627 aaKnown RBP25.48■■□□□ 1.67
FAM3A-207ENST00000416319 TBC1D2BQ9UPU7 963 aa25.48■■□□□ 1.67
FAM3A-207ENST00000416319 ERVV-1B6SEH8 477 aa25.47■■□□□ 1.67
FAM3A-207ENST00000416319 CAMTA2O94983 1202 aa25.47■■□□□ 1.67
FAM3A-207ENST00000416319 STK31Q9BXU1 1019 aa25.47■■□□□ 1.67
FAM3A-207ENST00000416319 CLEC4GQ6UXB4 293 aa25.46■■□□□ 1.67
FAM3A-207ENST00000416319 SGIP1Q9BQI5 828 aa25.46■■□□□ 1.67
FAM3A-207ENST00000416319 ANXA1P04083 346 aa25.45■■□□□ 1.66
FAM3A-207ENST00000416319 KIF6Q6ZMV9 814 aa25.45■■□□□ 1.66
FAM3A-207ENST00000416319 BCL2L12Q9HB09 334 aa25.45■■□□□ 1.66
FAM3A-207ENST00000416319 SRCAPQ6ZRS2 3230 aa25.45■■□□□ 1.66
FAM3A-207ENST00000416319 C4AP0C0L4 1744 aa25.45■■□□□ 1.66
FAM3A-207ENST00000416319 MAP3K15Q6ZN16 1313 aa25.44■■□□□ 1.66
FAM3A-207ENST00000416319 PTGER2P43116 358 aa25.44■■□□□ 1.66
FAM3A-207ENST00000416319 COPS6Q7L5N1 327 aa25.44■■□□□ 1.66
FAM3A-207ENST00000416319 ATF5Q9Y2D1 282 aaPredicted RBP25.44■■□□□ 1.66
FAM3A-207ENST00000416319 POLD1P28340 1107 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms