RNA–Protein interactions for RNA: ENST00000415548.1

CCT3-208, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 3

Gene CCT3, Length 513 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-208ENST00000415548 C4AP0C0L4 1744 aa11.09□□□□□ -0.63
CCT3-208ENST00000415548 WDR43Q15061 677 aaKnown RBP eCLIP11.09□□□□□ -0.63
CCT3-208ENST00000415548 CCDC146Q8IYE0 955 aa11.09□□□□□ -0.63
CCT3-208ENST00000415548 FMNL2Q96PY5 1086 aa11.09□□□□□ -0.63
CCT3-208ENST00000415548 THUMPD2Q9BTF0 503 aaKnown RBP11.09□□□□□ -0.63
CCT3-208ENST00000415548 SRP68Q9UHB9 627 aaKnown RBP11.09□□□□□ -0.63
CCT3-208ENST00000415548 ZBTB1Q9Y2K1 713 aa11.09□□□□□ -0.63
CCT3-208ENST00000415548 SOS1Q07889 1333 aaPredicted RBP11.09□□□□□ -0.63
CCT3-208ENST00000415548 STARD3NLO95772 234 aa11.08□□□□□ -0.64
CCT3-208ENST00000415548 GYS1P13807 737 aa11.08□□□□□ -0.64
CCT3-208ENST00000415548 TAF7Q15545 349 aaPredicted RBP11.08□□□□□ -0.64
CCT3-208ENST00000415548 NLGN2Q8NFZ4 835 aa11.08□□□□□ -0.64
CCT3-208ENST00000415548 MIS18AQ9NYP9 233 aa11.08□□□□□ -0.64
CCT3-208ENST00000415548 ADAMTS8Q9UP79 889 aa11.08□□□□□ -0.64
CCT3-208ENST00000415548 MMP10P09238 476 aa11.07□□□□□ -0.64
CCT3-208ENST00000415548 CANXP27824 592 aaKnown RBP11.07□□□□□ -0.64
CCT3-208ENST00000415548 RIPK4P57078 832 aa11.07□□□□□ -0.64
CCT3-208ENST00000415548 NLGN1Q8N2Q7 840 aa11.07□□□□□ -0.64
CCT3-208ENST00000415548 RRP7AQ9Y3A4 280 aaKnown RBP11.07□□□□□ -0.64
CCT3-208ENST00000415548 USP42Q9H9J4 1324 aaKnown RBP11.07□□□□□ -0.64
CCT3-208ENST00000415548 PRAMEF22A3QJZ6 481 aa11.06□□□□□ -0.64
CCT3-208ENST00000415548 TMPOP42166 694 aaKnown RBP11.06□□□□□ -0.64
CCT3-208ENST00000415548 TEX13AQ9BXU3 409 aaPredicted RBP11.06□□□□□ -0.64
CCT3-208ENST00000415548 CD2APQ9Y5K6 639 aa11.06□□□□□ -0.64
CCT3-208ENST00000415548 COL15A1P39059 1388 aa11.05□□□□□ -0.64
CCT3-208ENST00000415548 ZPR1O75312 459 aa11.05□□□□□ -0.64
CCT3-208ENST00000415548 A1BGP04217 495 aa11.05□□□□□ -0.64
CCT3-208ENST00000415548 FKBP8Q14318 412 aa11.05□□□□□ -0.64
CCT3-208ENST00000415548 CCDC184Q52MB2 194 aa11.05□□□□□ -0.64
CCT3-208ENST00000415548 USPL1Q5W0Q7 1092 aa11.05□□□□□ -0.64
CCT3-208ENST00000415548 RUNDC1Q96C34 613 aa11.05□□□□□ -0.64
CCT3-208ENST00000415548 USP16Q9Y5T5 823 aa11.05□□□□□ -0.64
CCT3-208ENST00000415548 KDM3BQ7LBC6 1761 aa11.05□□□□□ -0.64
CCT3-208ENST00000415548 SNRPA1P09661 255 aaKnown RBP11.04□□□□□ -0.64
CCT3-208ENST00000415548 EIF5P55010 431 aaKnown RBP11.04□□□□□ -0.64
CCT3-208ENST00000415548 NEUROD2Q15784 382 aa11.04□□□□□ -0.64
CCT3-208ENST00000415548 PELP1Q8IZL8 1130 aaKnown RBP11.04□□□□□ -0.64
CCT3-208ENST00000415548 PNISRQ8TF01 805 aaKnown RBP11.04□□□□□ -0.64
CCT3-208ENST00000415548 NARFQ9UHQ1 456 aa11.04□□□□□ -0.64
CCT3-208ENST00000415548 ZNF330Q9Y3S2 320 aaPredicted RBP11.04□□□□□ -0.64
CCT3-208ENST00000415548 GOLGB1Q14789 3259 aaKnown RBP11.03□□□□□ -0.64
CCT3-208ENST00000415548 UTRNP46939 3433 aa11.03□□□□□ -0.64
CCT3-208ENST00000415548 ANP32CO43423 234 aa11.03□□□□□ -0.64
CCT3-208ENST00000415548 PIP4K2AP48426 406 aaPredicted RBP11.03□□□□□ -0.64
CCT3-208ENST00000415548 DDR1Q08345 913 aa11.03□□□□□ -0.64
CCT3-208ENST00000415548 LMOD3Q0VAK6 560 aa11.03□□□□□ -0.64
CCT3-208ENST00000415548 GPR162Q16538 588 aa11.03□□□□□ -0.64
CCT3-208ENST00000415548 BCL2L12Q9HB09 334 aa11.03□□□□□ -0.64
CCT3-208ENST00000415548 PARP3Q9Y6F1 533 aa11.03□□□□□ -0.64
CCT3-208ENST00000415548 A0A087WZG4 1122 aa11.02□□□□□ -0.65
CCT3-208ENST00000415548 IL6STP40189 918 aaPredicted RBP11.02□□□□□ -0.65
CCT3-208ENST00000415548 EIF4A1P60842 406 aaKnown RBP11.02□□□□□ -0.65
CCT3-208ENST00000415548 TRIM35Q9UPQ4 493 aa11.02□□□□□ -0.65
CCT3-208ENST00000415548 C10orf71Q711Q0 1435 aa11.01□□□□□ -0.65
CCT3-208ENST00000415548 YBX3P16989 372 aaKnown RBP eCLIP11.01□□□□□ -0.659e-12■■■■□ 20.8
CCT3-208ENST00000415548 TM4SF1P30408 202 aa11.01□□□□□ -0.65
CCT3-208ENST00000415548 TSPYL4Q9UJ04 414 aa11.01□□□□□ -0.65
CCT3-208ENST00000415548 WWC3Q9ULE0 1092 aa11.01□□□□□ -0.65
CCT3-208ENST00000415548 TBC1D2BQ9UPU7 963 aa11.01□□□□□ -0.65
CCT3-208ENST00000415548 LAMB4A4D0S4 1761 aa11□□□□□ -0.65
CCT3-208ENST00000415548 KIF13BQ9NQT8 1826 aa11□□□□□ -0.65
CCT3-208ENST00000415548 NBPF26B4DH59 902 aa11□□□□□ -0.65
CCT3-208ENST00000415548 POLRMTO00411 1230 aaKnown RBP11□□□□□ -0.65
CCT3-208ENST00000415548 APAF1O14727 1248 aa11□□□□□ -0.65
CCT3-208ENST00000415548 GIGYF1O75420 1035 aaPredicted RBP11□□□□□ -0.65
CCT3-208ENST00000415548 NFIXQ14938 502 aa11□□□□□ -0.65
CCT3-208ENST00000415548 NBPF10Q6P3W6 841 aaKnown RBP11□□□□□ -0.65
CCT3-208ENST00000415548 NPM2Q86SE8 214 aaKnown RBP11□□□□□ -0.65
CCT3-208ENST00000415548 NBPF15Q8N660 670 aa11□□□□□ -0.65
CCT3-208ENST00000415548 MRS2Q9HD23 443 aa11□□□□□ -0.65
CCT3-208ENST00000415548 SCN7AQ01118 1682 aa10.99□□□□□ -0.65
CCT3-208ENST00000415548 KIAA1551Q9HCM1 1747 aa10.99□□□□□ -0.65
CCT3-208ENST00000415548 CAMTA2O94983 1202 aa10.99□□□□□ -0.65
CCT3-208ENST00000415548 BICDL1Q6ZP65 573 aa10.99□□□□□ -0.65
CCT3-208ENST00000415548 BABAM1Q9NWV8 329 aa10.99□□□□□ -0.65
CCT3-208ENST00000415548 PXDNLA1KZ92 1463 aa10.99□□□□□ -0.65
CCT3-208ENST00000415548 N4BP2Q86UW6 1770 aaPredicted RBP10.98□□□□□ -0.65
CCT3-208ENST00000415548 AFDNP55196 1824 aaKnown RBP10.98□□□□□ -0.65
CCT3-208ENST00000415548 A0A0G2JLW4 131 aa10.98□□□□□ -0.65
CCT3-208ENST00000415548 YY1P25490 414 aa10.98□□□□□ -0.65
CCT3-208ENST00000415548 TGFB2P61812 414 aa10.98□□□□□ -0.65
CCT3-208ENST00000415548 TBC1D9BQ66K14 1250 aa10.98□□□□□ -0.65
CCT3-208ENST00000415548 DZIP3Q86Y13 1208 aaKnown RBP10.98□□□□□ -0.65
CCT3-208ENST00000415548 LAS1LQ9Y4W2 734 aaKnown RBP10.98□□□□□ -0.65
CCT3-208ENST00000415548 SENP3-EIF4A1A0A087X0R7 540 aa10.97□□□□□ -0.65
CCT3-208ENST00000415548 CHL1O00533 1208 aa10.97□□□□□ -0.65
CCT3-208ENST00000415548 SERPINB2P05120 415 aa10.97□□□□□ -0.65
CCT3-208ENST00000415548 DPEP1P16444 411 aa10.97□□□□□ -0.65
CCT3-208ENST00000415548 KCNA4P22459 653 aa10.97□□□□□ -0.65
CCT3-208ENST00000415548 BCORQ6W2J9 1755 aa10.97□□□□□ -0.65
CCT3-208ENST00000415548 CHD4Q14839 1912 aa10.97□□□□□ -0.65
CCT3-208ENST00000415548 NRXN2Q9P2S2 1712 aa10.96□□□□□ -0.65
CCT3-208ENST00000415548 GRIN3BO60391 1043 aa10.96□□□□□ -0.65
CCT3-208ENST00000415548 NGEFQ8N5V2 710 aa10.96□□□□□ -0.65
CCT3-208ENST00000415548 MYL6BP14649 208 aa10.95□□□□□ -0.66
CCT3-208ENST00000415548 EIF2S2P20042 333 aaKnown RBP10.95□□□□□ -0.66
CCT3-208ENST00000415548 KRT24Q2M2I5 525 aa10.95□□□□□ -0.66
CCT3-208ENST00000415548 CARMIL3Q8ND23 1372 aa10.94□□□□□ -0.66
CCT3-208ENST00000415548 KCNA3P22001 575 aa10.94□□□□□ -0.66
CCT3-208ENST00000415548 CHRNA5P30532 468 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms