RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 SLC27A3Q5K4L6 730 aa17.1■□□□□ 0.33
CNN3-203ENST00000415017 HDGFL1Q5TGJ6 251 aa17.1■□□□□ 0.33
CNN3-203ENST00000415017 CCDC30Q5VVM6 783 aa17.1■□□□□ 0.33
CNN3-203ENST00000415017 CCDC125Q86Z20 511 aa17.1■□□□□ 0.33
CNN3-203ENST00000415017 MRPL50Q8N5N7 158 aaKnown RBP17.1■□□□□ 0.33
CNN3-203ENST00000415017 RBM42Q9BTD8 480 aaKnown RBP17.1■□□□□ 0.33
CNN3-203ENST00000415017 C4BP0C0L5 1744 aa17.1■□□□□ 0.33
CNN3-203ENST00000415017 ATP6V1AP38606 617 aa17.09■□□□□ 0.33
CNN3-203ENST00000415017 LRRC4BQ9NT99 713 aa17.09■□□□□ 0.33
CNN3-203ENST00000415017 UBR3Q6ZT12 1888 aa17.09■□□□□ 0.33
CNN3-203ENST00000415017 NBPF26B4DH59 902 aa17.08■□□□□ 0.32
CNN3-203ENST00000415017 APBA3O96018 575 aa17.08■□□□□ 0.32
CNN3-203ENST00000415017 NBPF14Q5TI25 921 aa17.08■□□□□ 0.32
CNN3-203ENST00000415017 NBPF10Q6P3W6 841 aaKnown RBP17.08■□□□□ 0.32
CNN3-203ENST00000415017 NBPF15Q8N660 670 aa17.08■□□□□ 0.32
CNN3-203ENST00000415017 CAMKK2Q96RR4 588 aa17.08■□□□□ 0.32
CNN3-203ENST00000415017 DDX21Q9NR30 783 aaKnown RBP eCLIP17.08■□□□□ 0.32
CNN3-203ENST00000415017 DBF4Q9UBU7 674 aaPredicted RBP17.08■□□□□ 0.32
CNN3-203ENST00000415017 N4BP2Q86UW6 1770 aaPredicted RBP17.07■□□□□ 0.32
CNN3-203ENST00000415017 NUP188Q5SRE5 1749 aa17.07■□□□□ 0.32
CNN3-203ENST00000415017 CNTNAP4Q9C0A0 1308 aa17.07■□□□□ 0.32
CNN3-203ENST00000415017 BCAR3O75815 825 aa17.07■□□□□ 0.32
CNN3-203ENST00000415017 RC3H1Q5TC82 1133 aaKnown RBP17.07■□□□□ 0.32
CNN3-203ENST00000415017 INTS5Q6P9B9 1019 aaKnown RBP17.07■□□□□ 0.32
CNN3-203ENST00000415017 STARD3NLO95772 234 aa17.06■□□□□ 0.32
CNN3-203ENST00000415017 TXNRD1Q16881 649 aa17.06■□□□□ 0.32
CNN3-203ENST00000415017 LINC00116Q8NCU8 138 aa17.06■□□□□ 0.32
CNN3-203ENST00000415017 CCNL1Q9UK58 526 aaPredicted RBP17.06■□□□□ 0.32
CNN3-203ENST00000415017 QSER1Q2KHR3 1735 aa17.06■□□□□ 0.32
CNN3-203ENST00000415017 EIF2S2P20042 333 aaKnown RBP17.05■□□□□ 0.32
CNN3-203ENST00000415017 PROSER3Q2NL68 480 aa17.05■□□□□ 0.32
CNN3-203ENST00000415017 ARHGAP45Q92619 1136 aa17.05■□□□□ 0.32
CNN3-203ENST00000415017 CHPF2Q9P2E5 772 aa17.05■□□□□ 0.32
CNN3-203ENST00000415017 TUBGCP6Q96RT7 1819 aa17.05■□□□□ 0.32
CNN3-203ENST00000415017 A1BGP04217 495 aa17.04■□□□□ 0.32
CNN3-203ENST00000415017 SLC4A2P04920 1241 aa17.04■□□□□ 0.32
CNN3-203ENST00000415017 HMGB2P26583 209 aaKnown RBP17.04■□□□□ 0.32
CNN3-203ENST00000415017 HYPKQ9NX55 129 aa17.04■□□□□ 0.32
CNN3-203ENST00000415017 CRKLP46109 303 aaKnown RBP17.03■□□□□ 0.32
CNN3-203ENST00000415017 G2E3Q7L622 706 aa17.03■□□□□ 0.32
CNN3-203ENST00000415017 STK31Q9BXU1 1019 aa17.03■□□□□ 0.32
CNN3-203ENST00000415017 SMC4Q9NTJ3 1288 aa17.03■□□□□ 0.32
CNN3-203ENST00000415017 CCDC87Q9NVE4 849 aa17.03■□□□□ 0.32
CNN3-203ENST00000415017 ARFGEF2Q9Y6D5 1785 aa17.02■□□□□ 0.32
CNN3-203ENST00000415017 KIF16BQ96L93 1317 aa17.02■□□□□ 0.32
CNN3-203ENST00000415017 IL6STP40189 918 aaPredicted RBP17.02■□□□□ 0.32
CNN3-203ENST00000415017 EIF5P55010 431 aaKnown RBP17.02■□□□□ 0.32
CNN3-203ENST00000415017 KCNQ4P56696 695 aa17.02■□□□□ 0.32
CNN3-203ENST00000415017 NECTIN2Q92692 538 aa17.02■□□□□ 0.32
CNN3-203ENST00000415017 UPF1Q92900 1129 aaKnown RBP eCLIP17.02■□□□□ 0.32
CNN3-203ENST00000415017 BCL2L13Q9BXK5 485 aa17.02■□□□□ 0.32
CNN3-203ENST00000415017 ZBTB1Q9Y2K1 713 aa17.02■□□□□ 0.32
CNN3-203ENST00000415017 BCORQ6W2J9 1755 aa17.02■□□□□ 0.31
CNN3-203ENST00000415017 C4AP0C0L4 1744 aa17.01■□□□□ 0.31
CNN3-203ENST00000415017 PTPRCP08575 1304 aa17.01■□□□□ 0.31
CNN3-203ENST00000415017 TCERG1O14776 1098 aaKnown RBP17.01■□□□□ 0.31
CNN3-203ENST00000415017 PHAXQ9H814 394 aaKnown RBP17.01■□□□□ 0.31
CNN3-203ENST00000415017 NUP98P52948 1817 aa17■□□□□ 0.31
CNN3-203ENST00000415017 ANXA1P04083 346 aa17■□□□□ 0.31
CNN3-203ENST00000415017 FLIIQ13045 1269 aa17■□□□□ 0.31
CNN3-203ENST00000415017 RPS6KA4O75676 772 aa16.99■□□□□ 0.31
CNN3-203ENST00000415017 BAG6P46379 1132 aa16.99■□□□□ 0.31
CNN3-203ENST00000415017 RRP1P56182 461 aaKnown RBP16.99■□□□□ 0.31
CNN3-203ENST00000415017 EN1Q05925 392 aaPredicted RBP16.99■□□□□ 0.31
CNN3-203ENST00000415017 EZH2Q15910 746 aaKnown RBP16.99■□□□□ 0.31
CNN3-203ENST00000415017 AKT1S1Q96B36 256 aa16.99■□□□□ 0.31
CNN3-203ENST00000415017 NOB1Q9ULX3 412 aaKnown RBP16.99■□□□□ 0.31
CNN3-203ENST00000415017 SUPT16HQ9Y5B9 1047 aaKnown RBP16.99■□□□□ 0.31
CNN3-203ENST00000415017 ANKRD36CQ5JPF3 1778 aa16.99■□□□□ 0.31
CNN3-203ENST00000415017 SCN7AQ01118 1682 aa16.98■□□□□ 0.31
CNN3-203ENST00000415017 ADCY9O60503 1353 aa16.98■□□□□ 0.31
CNN3-203ENST00000415017 IBTKQ9P2D0 1353 aaPredicted RBP16.98■□□□□ 0.31
CNN3-203ENST00000415017 PXDNLA1KZ92 1463 aa16.98■□□□□ 0.31
CNN3-203ENST00000415017 RGL2O15211 777 aa16.97■□□□□ 0.31
CNN3-203ENST00000415017 IPO8O15397 1037 aaKnown RBP16.97■□□□□ 0.31
CNN3-203ENST00000415017 TRIM27P14373 513 aa16.97■□□□□ 0.31
CNN3-203ENST00000415017 PIP4K2AP48426 406 aaPredicted RBP16.97■□□□□ 0.31
CNN3-203ENST00000415017 SF3B2Q13435 895 aaKnown RBP16.97■□□□□ 0.31
CNN3-203ENST00000415017 ZKSCAN2Q63HK3 967 aa16.97■□□□□ 0.31
CNN3-203ENST00000415017 ATF7IPQ6VMQ6 1270 aa16.97■□□□□ 0.31
CNN3-203ENST00000415017 COPS6Q7L5N1 327 aa16.97■□□□□ 0.31
CNN3-203ENST00000415017 DEFB132Q7Z7B7 95 aa16.97■□□□□ 0.31
CNN3-203ENST00000415017 ABCC4O15439 1325 aa16.96■□□□□ 0.31
CNN3-203ENST00000415017 MYL6BP14649 208 aa16.96■□□□□ 0.31
CNN3-203ENST00000415017 PDE3AQ14432 1141 aa16.96■□□□□ 0.31
CNN3-203ENST00000415017 AMIGO3Q86WK7 504 aa16.96■□□□□ 0.31
CNN3-203ENST00000415017 XAGE3Q8WTP9 111 aa16.96■□□□□ 0.31
CNN3-203ENST00000415017 COL15A1P39059 1388 aa16.95■□□□□ 0.3
CNN3-203ENST00000415017 CANXP27824 592 aaKnown RBP16.95■□□□□ 0.3
CNN3-203ENST00000415017 KSR2Q6VAB6 950 aa16.95■□□□□ 0.3
CNN3-203ENST00000415017 TTLL7Q6ZT98 887 aa16.95■□□□□ 0.3
CNN3-203ENST00000415017 API5Q9BZZ5 524 aaKnown RBP16.95■□□□□ 0.3
CNN3-203ENST00000415017 ATP10DQ9P241 1426 aa16.95■□□□□ 0.3
CNN3-203ENST00000415017 PLIN1O60240 522 aa16.94■□□□□ 0.3
CNN3-203ENST00000415017 ADRA2BP18089 450 aa16.94■□□□□ 0.3
CNN3-203ENST00000415017 ZNF827Q17R98 1081 aa16.94■□□□□ 0.3
CNN3-203ENST00000415017 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.94■□□□□ 0.3
CNN3-203ENST00000415017 PLBD2Q8NHP8 589 aa16.94■□□□□ 0.3
CNN3-203ENST00000415017 TNNQ9UQP3 1299 aa16.94■□□□□ 0.3
CNN3-203ENST00000415017 ERVV-1B6SEH8 477 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms