RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 ARXQ96QS3 562 aa33.19■■■□□ 2.9
CPNE1-207ENST00000414664 SNRPA1P09661 255 aaKnown RBP33.18■■■□□ 2.9
CPNE1-207ENST00000414664 COL24A1Q17RW2 1714 aa33.18■■■□□ 2.9
CPNE1-207ENST00000414664 APAF1O14727 1248 aa33.17■■■□□ 2.9
CPNE1-207ENST00000414664 MSL1Q68DK7 614 aa33.17■■■□□ 2.9
CPNE1-207ENST00000414664 BABAM1Q9NWV8 329 aa33.17■■■□□ 2.9
CPNE1-207ENST00000414664 TRIM35Q9UPQ4 493 aa33.17■■■□□ 2.9
CPNE1-207ENST00000414664 ZBTB1Q9Y2K1 713 aa33.14■■■□□ 2.9
CPNE1-207ENST00000414664 SOS1Q07889 1333 aaPredicted RBP33.13■■■□□ 2.89
CPNE1-207ENST00000414664 TSPYL4Q9UJ04 414 aa33.13■■■□□ 2.89
CPNE1-207ENST00000414664 KDM3BQ7LBC6 1761 aa33.12■■■□□ 2.89
CPNE1-207ENST00000414664 CANXP27824 592 aaKnown RBP33.12■■■□□ 2.89
CPNE1-207ENST00000414664 NLGN1Q8N2Q7 840 aa33.11■■■□□ 2.89
CPNE1-207ENST00000414664 EIF4A1P60842 406 aaKnown RBP33.1■■■□□ 2.89
CPNE1-207ENST00000414664 USP16Q9Y5T5 823 aa33.1■■■□□ 2.89
CPNE1-207ENST00000414664 NPM2Q86SE8 214 aaKnown RBP33.09■■■□□ 2.89
CPNE1-207ENST00000414664 COL15A1P39059 1388 aa33.08■■■□□ 2.89
CPNE1-207ENST00000414664 A0A087WZG4 1122 aa33.07■■■□□ 2.88
CPNE1-207ENST00000414664 ZPR1O75312 459 aa33.07■■■□□ 2.88
CPNE1-207ENST00000414664 CALD1Q05682 793 aaKnown RBP33.07■■■□□ 2.88
CPNE1-207ENST00000414664 FHDC1Q9C0D6 1143 aaPredicted RBP33.07■■■□□ 2.88
CPNE1-207ENST00000414664 USP42Q9H9J4 1324 aaKnown RBP33.06■■■□□ 2.88
CPNE1-207ENST00000414664 PRAMEF22A3QJZ6 481 aa33.06■■■□□ 2.88
CPNE1-207ENST00000414664 A1BGP04217 495 aa33.06■■■□□ 2.88
CPNE1-207ENST00000414664 GYS1P13807 737 aa33.06■■■□□ 2.88
CPNE1-207ENST00000414664 IL6STP40189 918 aaPredicted RBP33.06■■■□□ 2.88
CPNE1-207ENST00000414664 EIF5P55010 431 aaKnown RBP33.06■■■□□ 2.88
CPNE1-207ENST00000414664 C4AP0C0L4 1744 aa33.05■■■□□ 2.88
CPNE1-207ENST00000414664 GIGYF1O75420 1035 aaPredicted RBP33.05■■■□□ 2.88
CPNE1-207ENST00000414664 LAS1LQ9Y4W2 734 aaKnown RBP33.05■■■□□ 2.88
CPNE1-207ENST00000414664 CHL1O00533 1208 aa33.04■■■□□ 2.88
CPNE1-207ENST00000414664 FAM9BQ8IZU0 186 aa33.04■■■□□ 2.88
CPNE1-207ENST00000414664 NARFQ9UHQ1 456 aa33.04■■■□□ 2.88
CPNE1-207ENST00000414664 SYT17Q9BSW7 474 aa33.03■■■□□ 2.88
CPNE1-207ENST00000414664 SRP68Q9UHB9 627 aaKnown RBP33.03■■■□□ 2.88
CPNE1-207ENST00000414664 CFAP44Q96MT7 982 aa33.02■■■□□ 2.88
CPNE1-207ENST00000414664 NCBP3Q53F19 620 aaKnown RBP33.01■■■□□ 2.87
CPNE1-207ENST00000414664 KLHL34Q8N239 644 aa33.01■■■□□ 2.87
CPNE1-207ENST00000414664 ZNF330Q9Y3S2 320 aaPredicted RBP33.01■■■□□ 2.87
CPNE1-207ENST00000414664 MMP10P09238 476 aa33■■■□□ 2.87
CPNE1-207ENST00000414664 USPL1Q5W0Q7 1092 aa33■■■□□ 2.87
CPNE1-207ENST00000414664 CCDC27Q2M243 656 aa32.99■■■□□ 2.87
CPNE1-207ENST00000414664 LAMB4A4D0S4 1761 aa32.97■■■□□ 2.87
CPNE1-207ENST00000414664 GNAI1P63096 354 aa32.97■■■□□ 2.87
CPNE1-207ENST00000414664 CCER2I3L3R5 266 aa32.96■■■□□ 2.87
CPNE1-207ENST00000414664 FKBP8Q14318 412 aa32.96■■■□□ 2.87
CPNE1-207ENST00000414664 IFT57Q9NWB7 429 aa32.96■■■□□ 2.87
CPNE1-207ENST00000414664 DCAF8L1A6NGE4 600 aa32.95■■■□□ 2.87
CPNE1-207ENST00000414664 DIEXFQ68CQ4 756 aaKnown RBP32.95■■■□□ 2.87
CPNE1-207ENST00000414664 PARP3Q9Y6F1 533 aa32.95■■■□□ 2.87
CPNE1-207ENST00000414664 CD2APQ9Y5K6 639 aa32.94■■■□□ 2.86
CPNE1-207ENST00000414664 ZNF853P0CG23 659 aa32.93■■■□□ 2.86
CPNE1-207ENST00000414664 PIP4K2AP48426 406 aaPredicted RBP32.93■■■□□ 2.86
CPNE1-207ENST00000414664 TBC1D2BQ9UPU7 963 aa32.93■■■□□ 2.86
CPNE1-207ENST00000414664 NBPF26B4DH59 902 aa32.92■■■□□ 2.86
CPNE1-207ENST00000414664 NBPF10Q6P3W6 841 aaKnown RBP32.92■■■□□ 2.86
CPNE1-207ENST00000414664 WWC1Q8IX03 1113 aa32.92■■■□□ 2.86
CPNE1-207ENST00000414664 NBPF15Q8N660 670 aa32.92■■■□□ 2.86
CPNE1-207ENST00000414664 DZIP3Q86Y13 1208 aaKnown RBP32.91■■■□□ 2.86
CPNE1-207ENST00000414664 MBIPQ9NS73 344 aa32.91■■■□□ 2.86
CPNE1-207ENST00000414664 ERBB4Q15303 1308 aa32.91■■■□□ 2.86
CPNE1-207ENST00000414664 TM4SF1P30408 202 aa32.9■■■□□ 2.86
CPNE1-207ENST00000414664 NGEFQ8N5V2 710 aa32.9■■■□□ 2.86
CPNE1-207ENST00000414664 SENP3-EIF4A1A0A087X0R7 540 aa32.89■■■□□ 2.86
CPNE1-207ENST00000414664 BCL2L12Q9HB09 334 aa32.89■■■□□ 2.86
CPNE1-207ENST00000414664 EIF2S2P20042 333 aaKnown RBP32.88■■■□□ 2.85
CPNE1-207ENST00000414664 HOXB7P09629 217 aa32.87■■■□□ 2.85
CPNE1-207ENST00000414664 CAMTA2O94983 1202 aa32.86■■■□□ 2.85
CPNE1-207ENST00000414664 NFIXQ14938 502 aa32.85■■■□□ 2.85
CPNE1-207ENST00000414664 SALL2Q9Y467 1007 aaPredicted RBP32.85■■■□□ 2.85
CPNE1-207ENST00000414664 MYL6BP14649 208 aa32.84■■■□□ 2.85
CPNE1-207ENST00000414664 DDR1Q08345 913 aa32.84■■■□□ 2.85
CPNE1-207ENST00000414664 NLGN2Q8NFZ4 835 aa32.84■■■□□ 2.85
CPNE1-207ENST00000414664 ZNF652Q9Y2D9 606 aa32.84■■■□□ 2.85
CPNE1-207ENST00000414664 IL16Q14005 1332 aa32.83■■■□□ 2.85
CPNE1-207ENST00000414664 SCN7AQ01118 1682 aa32.83■■■□□ 2.85
CPNE1-207ENST00000414664 POLRMTO00411 1230 aaKnown RBP32.83■■■□□ 2.85
CPNE1-207ENST00000414664 KRT24Q2M2I5 525 aa32.83■■■□□ 2.85
CPNE1-207ENST00000414664 CLEC4GQ6UXB4 293 aa32.83■■■□□ 2.85
CPNE1-207ENST00000414664 RGL2O15211 777 aa32.82■■■□□ 2.84
CPNE1-207ENST00000414664 WDR63Q8IWG1 891 aa32.82■■■□□ 2.84
CPNE1-207ENST00000414664 DUSP27Q5VZP5 1158 aa32.81■■■□□ 2.84
CPNE1-207ENST00000414664 TBC1D9BQ66K14 1250 aa32.8■■■□□ 2.84
CPNE1-207ENST00000414664 BICDL1Q6ZP65 573 aa32.8■■■□□ 2.84
CPNE1-207ENST00000414664 HDGFL1Q5TGJ6 251 aa32.79■■■□□ 2.84
CPNE1-207ENST00000414664 KIF6Q6ZMV9 814 aa32.79■■■□□ 2.84
CPNE1-207ENST00000414664 SERPINB2P05120 415 aa32.78■■■□□ 2.84
CPNE1-207ENST00000414664 TGFB2P61812 414 aa32.78■■■□□ 2.84
CPNE1-207ENST00000414664 PDIA6Q15084 440 aa32.78■■■□□ 2.84
CPNE1-207ENST00000414664 NECTIN2Q92692 538 aa32.78■■■□□ 2.84
CPNE1-207ENST00000414664 SETDB2Q96T68 719 aa32.78■■■□□ 2.84
CPNE1-207ENST00000414664 CHMP4AQ9BY43 222 aa32.78■■■□□ 2.84
CPNE1-207ENST00000414664 BCORQ6W2J9 1755 aa32.78■■■□□ 2.84
CPNE1-207ENST00000414664 C10orf71Q711Q0 1435 aa32.77■■■□□ 2.84
CPNE1-207ENST00000414664 ERVV-1B6SEH8 477 aa32.76■■■□□ 2.83
CPNE1-207ENST00000414664 DDX21Q9NR30 783 aaKnown RBP eCLIP32.76■■■□□ 2.83
CPNE1-207ENST00000414664 KIF13BQ9NQT8 1826 aa32.75■■■□□ 2.83
CPNE1-207ENST00000414664 MAP3K15Q6ZN16 1313 aa32.75■■■□□ 2.83
CPNE1-207ENST00000414664 CARMIL3Q8ND23 1372 aa32.74■■■□□ 2.83
CPNE1-207ENST00000414664 GPR162Q16538 588 aa32.74■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms