RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 HCN4Q9Y3Q4 1203 aa7.81□□□□□ -1.16
HMGB3P31-201ENST00000413333 PARP3Q9Y6F1 533 aa7.81□□□□□ -1.16
HMGB3P31-201ENST00000413333 SERTM1A2A2V5 107 aa7.8□□□□□ -1.16
HMGB3P31-201ENST00000413333 TTC24A2A3L6 582 aaPredicted RBP7.8□□□□□ -1.16
HMGB3P31-201ENST00000413333 PTGIRP43119 386 aa7.8□□□□□ -1.16
HMGB3P31-201ENST00000413333 EIF1AXP47813 144 aaKnown RBP7.8□□□□□ -1.16
HMGB3P31-201ENST00000413333 WDR4P57081 412 aaKnown RBP7.8□□□□□ -1.16
HMGB3P31-201ENST00000413333 CLN3Q13286 438 aa7.8□□□□□ -1.16
HMGB3P31-201ENST00000413333 SH3PXD2AQ5TCZ1 1133 aa7.8□□□□□ -1.16
HMGB3P31-201ENST00000413333 RGL4Q8IZJ4 473 aa7.8□□□□□ -1.16
HMGB3P31-201ENST00000413333 ZFAND3Q9H8U3 227 aa7.8□□□□□ -1.16
HMGB3P31-201ENST00000413333 QTRT2Q9H974 415 aaKnown RBP7.8□□□□□ -1.16
HMGB3P31-201ENST00000413333 PKD2L1Q9P0L9 805 aa7.8□□□□□ -1.16
HMGB3P31-201ENST00000413333 LRFN2Q9ULH4 789 aa7.8□□□□□ -1.16
HMGB3P31-201ENST00000413333 HRH3Q9Y5N1 445 aa7.8□□□□□ -1.16
HMGB3P31-201ENST00000413333 J3QL48 77 aa7.79□□□□□ -1.16
HMGB3P31-201ENST00000413333 TNFRSF10BO14763 440 aa7.79□□□□□ -1.16
HMGB3P31-201ENST00000413333 NOS2P35228 1153 aa7.79□□□□□ -1.16
HMGB3P31-201ENST00000413333 EAPPQ56P03 285 aaPredicted RBP7.79□□□□□ -1.16
HMGB3P31-201ENST00000413333 ALKBH2Q6NS38 261 aa7.79□□□□□ -1.16
HMGB3P31-201ENST00000413333 TMC7Q7Z402 723 aa7.79□□□□□ -1.16
HMGB3P31-201ENST00000413333 IQSEC3Q9UPP2 1182 aaPredicted RBP7.79□□□□□ -1.16
HMGB3P31-201ENST00000413333 EML1O00423 815 aa7.78□□□□□ -1.16
HMGB3P31-201ENST00000413333 BRD2P25440 801 aaKnown RBP7.78□□□□□ -1.16
HMGB3P31-201ENST00000413333 GTF2E1P29083 439 aaPredicted RBP7.78□□□□□ -1.16
HMGB3P31-201ENST00000413333 TEAD4Q15561 434 aa7.78□□□□□ -1.16
HMGB3P31-201ENST00000413333 TMEM214Q6NUQ4 689 aaKnown RBP7.78□□□□□ -1.16
HMGB3P31-201ENST00000413333 Q6ZVU0 165 aa7.78□□□□□ -1.16
HMGB3P31-201ENST00000413333 FBXO33Q7Z6M2 555 aa7.78□□□□□ -1.16
HMGB3P31-201ENST00000413333 ALDH16A1Q8IZ83 802 aa7.78□□□□□ -1.16
HMGB3P31-201ENST00000413333 CYP4X1Q8N118 509 aa7.78□□□□□ -1.16
HMGB3P31-201ENST00000413333 ABTB2Q8N961 1025 aa7.78□□□□□ -1.16
HMGB3P31-201ENST00000413333 ZDHHC1Q8WTX9 485 aa7.78□□□□□ -1.16
HMGB3P31-201ENST00000413333 L3MBTL2Q969R5 705 aa7.78□□□□□ -1.16
HMGB3P31-201ENST00000413333 ZSCAN10Q96SZ4 725 aaPredicted RBP7.78□□□□□ -1.16
HMGB3P31-201ENST00000413333 RBCK1Q9BYM8 510 aa7.78□□□□□ -1.16
HMGB3P31-201ENST00000413333 PRKD2Q9BZL6 878 aa7.78□□□□□ -1.16
HMGB3P31-201ENST00000413333 FHDC1Q9C0D6 1143 aaPredicted RBP7.78□□□□□ -1.16
HMGB3P31-201ENST00000413333 CCDC87Q9NVE4 849 aa7.78□□□□□ -1.16
HMGB3P31-201ENST00000413333 IFFO2Q5TF58 517 aa7.77□□□□□ -1.17
HMGB3P31-201ENST00000413333 MYO19Q96H55 970 aa7.77□□□□□ -1.17
HMGB3P31-201ENST00000413333 TNFRSF10AO00220 468 aa7.76□□□□□ -1.17
HMGB3P31-201ENST00000413333 ZBTB39O15060 712 aa7.76□□□□□ -1.17
HMGB3P31-201ENST00000413333 FZD6O60353 706 aa7.76□□□□□ -1.17
HMGB3P31-201ENST00000413333 DGKZQ13574 1117 aa7.76□□□□□ -1.17
HMGB3P31-201ENST00000413333 FAM26DQ5JW98 314 aa7.76□□□□□ -1.17
HMGB3P31-201ENST00000413333 ATCAYQ86WG3 371 aa7.76□□□□□ -1.17
HMGB3P31-201ENST00000413333 KLF16Q9BXK1 252 aaPredicted RBP7.76□□□□□ -1.17
HMGB3P31-201ENST00000413333 PHACTR1Q9C0D0 580 aa7.76□□□□□ -1.17
HMGB3P31-201ENST00000413333 P4HBP07237 508 aaKnown RBP7.75□□□□□ -1.17
HMGB3P31-201ENST00000413333 TIMP2P16035 220 aa7.75□□□□□ -1.17
HMGB3P31-201ENST00000413333 MAPK8P45983 427 aa7.75□□□□□ -1.17
HMGB3P31-201ENST00000413333 COL19A1Q14993 1142 aa7.75□□□□□ -1.17
HMGB3P31-201ENST00000413333 C11orf91Q3C1V1 193 aa7.75□□□□□ -1.17
HMGB3P31-201ENST00000413333 PPARGC1BQ86YN6 1023 aaKnown RBP7.75□□□□□ -1.17
HMGB3P31-201ENST00000413333 NIFKQ9BYG3 293 aaKnown RBP7.75□□□□□ -1.17
HMGB3P31-201ENST00000413333 KLK14Q9P0G3 267 aa7.75□□□□□ -1.17
HMGB3P31-201ENST00000413333 PLCB3Q01970 1234 aa7.74□□□□□ -1.17
HMGB3P31-201ENST00000413333 RTN1Q16799 776 aa7.74□□□□□ -1.17
HMGB3P31-201ENST00000413333 SLC27A3Q5K4L6 730 aa7.74□□□□□ -1.17
HMGB3P31-201ENST00000413333 CITED4Q96RK1 184 aa7.74□□□□□ -1.17
HMGB3P31-201ENST00000413333 BCL11AQ9H165 835 aa7.74□□□□□ -1.17
HMGB3P31-201ENST00000413333 GDF9O60383 454 aa7.73□□□□□ -1.17
HMGB3P31-201ENST00000413333 DNM1Q05193 864 aaKnown RBP7.73□□□□□ -1.17
HMGB3P31-201ENST00000413333 GNASQ5JWF2 1037 aa7.73□□□□□ -1.17
HMGB3P31-201ENST00000413333 POTEAQ6S8J7 498 aa7.73□□□□□ -1.17
HMGB3P31-201ENST00000413333 ETFBKMTQ8IXQ9 262 aa7.73□□□□□ -1.17
HMGB3P31-201ENST00000413333 RHBDD1Q8TEB9 315 aa7.73□□□□□ -1.17
HMGB3P31-201ENST00000413333 EDEM1Q92611 657 aa7.73□□□□□ -1.17
HMGB3P31-201ENST00000413333 IFT43Q96FT9 208 aa7.73□□□□□ -1.17
HMGB3P31-201ENST00000413333 PLA2G2EQ9NZK7 142 aa7.73□□□□□ -1.17
HMGB3P31-201ENST00000413333 POLIQ9UNA4 740 aa7.73□□□□□ -1.17
HMGB3P31-201ENST00000413333 A0A0G2JS52 829 aa7.72□□□□□ -1.17
HMGB3P31-201ENST00000413333 TREHO43280 583 aa7.72□□□□□ -1.17
HMGB3P31-201ENST00000413333 SMPD1P17405 629 aa7.72□□□□□ -1.17
HMGB3P31-201ENST00000413333 TXLNAP40222 546 aa7.72□□□□□ -1.17
HMGB3P31-201ENST00000413333 PLA2G4AP47712 749 aa7.72□□□□□ -1.17
HMGB3P31-201ENST00000413333 HIRAP54198 1017 aaPredicted RBP7.72□□□□□ -1.17
HMGB3P31-201ENST00000413333 PDE3BQ13370 1112 aa7.72□□□□□ -1.17
HMGB3P31-201ENST00000413333 ZNF295-AS1Q8N0V1 137 aa7.72□□□□□ -1.17
HMGB3P31-201ENST00000413333 AIDAQ96BJ3 306 aa7.72□□□□□ -1.17
HMGB3P31-201ENST00000413333 DMRTB1Q96MA1 342 aa7.72□□□□□ -1.17
HMGB3P31-201ENST00000413333 IGSF5Q9NSI5 407 aa7.72□□□□□ -1.17
HMGB3P31-201ENST00000413333 V9GY48 417 aaPredicted RBP7.72□□□□□ -1.17
HMGB3P31-201ENST00000413333 ZAP70P43403 619 aa7.71□□□□□ -1.18
HMGB3P31-201ENST00000413333 PHKA2P46019 1235 aa7.71□□□□□ -1.18
HMGB3P31-201ENST00000413333 INSM2Q96T92 566 aaPredicted RBP7.71□□□□□ -1.18
HMGB3P31-201ENST00000413333 NIF3L1Q9GZT8 377 aa7.71□□□□□ -1.18
HMGB3P31-201ENST00000413333 POLMQ9NP87 494 aaPredicted RBP7.71□□□□□ -1.18
HMGB3P31-201ENST00000413333 TOR4AQ9NXH8 423 aa7.71□□□□□ -1.18
HMGB3P31-201ENST00000413333 GPR182O15218 404 aa7.7□□□□□ -1.18
HMGB3P31-201ENST00000413333 IGSF3O75054 1194 aa7.7□□□□□ -1.18
HMGB3P31-201ENST00000413333 LDHBP07195 334 aaKnown RBP7.7□□□□□ -1.18
HMGB3P31-201ENST00000413333 TCF3P15923 654 aa7.7□□□□□ -1.18
HMGB3P31-201ENST00000413333 FMR1Q06787 632 aaKnown RBP eCLIP7.7□□□□□ -1.18
HMGB3P31-201ENST00000413333 EHHADHQ08426 723 aa7.7□□□□□ -1.18
HMGB3P31-201ENST00000413333 DSC3Q14574 896 aa7.7□□□□□ -1.18
HMGB3P31-201ENST00000413333 TSNAXIP1Q2TAA8 658 aa7.7□□□□□ -1.18
HMGB3P31-201ENST00000413333 C4orf17Q53FE4 359 aa7.7□□□□□ -1.18
HMGB3P31-201ENST00000413333 TREML1Q86YW5 311 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms