RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 TSPYL4Q9UJ04 414 aa15.71■□□□□ 0.11
NEDD1-202ENST00000411739 UBR2Q8IWV8 1755 aa15.71■□□□□ 0.11
NEDD1-202ENST00000411739 ZNF330Q9Y3S2 320 aaPredicted RBP15.71■□□□□ 0.1
NEDD1-202ENST00000411739 FLAD1Q8NFF5 587 aa15.7■□□□□ 0.1
NEDD1-202ENST00000411739 SRP68Q9UHB9 627 aaKnown RBP15.7■□□□□ 0.1
NEDD1-202ENST00000411739 MIER1Q8N108 512 aa15.7■□□□□ 0.1
NEDD1-202ENST00000411739 STARD3NLO95772 234 aa15.69■□□□□ 0.1
NEDD1-202ENST00000411739 HMGB2P26583 209 aaKnown RBP15.69■□□□□ 0.1
NEDD1-202ENST00000411739 EIF4A1P60842 406 aaKnown RBP15.69■□□□□ 0.1
NEDD1-202ENST00000411739 SLC16A10Q8TF71 515 aa15.69■□□□□ 0.1
NEDD1-202ENST00000411739 SGIP1Q9BQI5 828 aa15.69■□□□□ 0.1
NEDD1-202ENST00000411739 ZNF831Q5JPB2 1677 aa15.69■□□□□ 0.1
NEDD1-202ENST00000411739 SNRPA1P09661 255 aaKnown RBP15.69■□□□□ 0.1
NEDD1-202ENST00000411739 QSER1Q2KHR3 1735 aa15.68■□□□□ 0.1
NEDD1-202ENST00000411739 RFC4P35249 363 aa15.68■□□□□ 0.1
NEDD1-202ENST00000411739 KRT24Q2M2I5 525 aa15.68■□□□□ 0.1
NEDD1-202ENST00000411739 KLHL34Q8N239 644 aa15.68■□□□□ 0.1
NEDD1-202ENST00000411739 ARXQ96QS3 562 aa15.68■□□□□ 0.1
NEDD1-202ENST00000411739 LRP5O75197 1615 aa15.67■□□□□ 0.1
NEDD1-202ENST00000411739 SOS1Q07889 1333 aaPredicted RBP15.66■□□□□ 0.1
NEDD1-202ENST00000411739 TEX13AQ9BXU3 409 aaPredicted RBP15.66■□□□□ 0.1
NEDD1-202ENST00000411739 CHL1O00533 1208 aa15.66■□□□□ 0.1
NEDD1-202ENST00000411739 GIGYF1O75420 1035 aaPredicted RBP15.66■□□□□ 0.1
NEDD1-202ENST00000411739 NECTIN2Q92692 538 aa15.66■□□□□ 0.1
NEDD1-202ENST00000411739 POLD1P28340 1107 aa15.65■□□□□ 0.1
NEDD1-202ENST00000411739 KDM3BQ7LBC6 1761 aa15.65■□□□□ 0.1
NEDD1-202ENST00000411739 GYS1P13807 737 aa15.65■□□□□ 0.1
NEDD1-202ENST00000411739 TBC1D2BQ9UPU7 963 aa15.65■□□□□ 0.1
NEDD1-202ENST00000411739 NBPF26B4DH59 902 aa15.64■□□□□ 0.09
NEDD1-202ENST00000411739 ADRA2BP18089 450 aa15.64■□□□□ 0.09
NEDD1-202ENST00000411739 EIF2S2P20042 333 aaKnown RBP15.64■□□□□ 0.09
NEDD1-202ENST00000411739 USPL1Q5W0Q7 1092 aa15.64■□□□□ 0.09
NEDD1-202ENST00000411739 NBPF10Q6P3W6 841 aaKnown RBP15.64■□□□□ 0.09
NEDD1-202ENST00000411739 NGEFQ8N5V2 710 aa15.64■□□□□ 0.09
NEDD1-202ENST00000411739 NBPF15Q8N660 670 aa15.64■□□□□ 0.09
NEDD1-202ENST00000411739 FKBP8Q14318 412 aa15.63■□□□□ 0.09
NEDD1-202ENST00000411739 WWC1Q8IX03 1113 aa15.63■□□□□ 0.09
NEDD1-202ENST00000411739 FHDC1Q9C0D6 1143 aaPredicted RBP15.63■□□□□ 0.09
NEDD1-202ENST00000411739 MBIPQ9NS73 344 aa15.63■□□□□ 0.09
NEDD1-202ENST00000411739 COL15A1P39059 1388 aa15.63■□□□□ 0.09
NEDD1-202ENST00000411739 CICQ96RK0 1608 aaPredicted RBP15.63■□□□□ 0.09
NEDD1-202ENST00000411739 EIF5P55010 431 aaKnown RBP15.63■□□□□ 0.09
NEDD1-202ENST00000411739 ZPR1O75312 459 aa15.62■□□□□ 0.09
NEDD1-202ENST00000411739 CFAP44Q96MT7 982 aa15.62■□□□□ 0.09
NEDD1-202ENST00000411739 USP42Q9H9J4 1324 aaKnown RBP15.62■□□□□ 0.09
NEDD1-202ENST00000411739 ELL2O00472 640 aaPredicted RBP15.62■□□□□ 0.09
NEDD1-202ENST00000411739 MMP10P09238 476 aa15.62■□□□□ 0.09
NEDD1-202ENST00000411739 CCER2I3L3R5 266 aa15.61■□□□□ 0.09
NEDD1-202ENST00000411739 ANXA1P04083 346 aa15.61■□□□□ 0.09
NEDD1-202ENST00000411739 ZNF853P0CG23 659 aa15.61■□□□□ 0.09
NEDD1-202ENST00000411739 MYL6BP14649 208 aa15.61■□□□□ 0.09
NEDD1-202ENST00000411739 TSR2Q969E8 191 aaKnown RBP15.61■□□□□ 0.09
NEDD1-202ENST00000411739 C4AP0C0L4 1744 aa15.61■□□□□ 0.09
NEDD1-202ENST00000411739 SYT17Q9BSW7 474 aa15.6■□□□□ 0.09
NEDD1-202ENST00000411739 BCL2L12Q9HB09 334 aa15.6■□□□□ 0.09
NEDD1-202ENST00000411739 BABAM1Q9NWV8 329 aa15.6■□□□□ 0.09
NEDD1-202ENST00000411739 IL6STP40189 918 aaPredicted RBP15.6■□□□□ 0.09
NEDD1-202ENST00000411739 BICDL1Q6ZP65 573 aa15.6■□□□□ 0.09
NEDD1-202ENST00000411739 IFT57Q9NWB7 429 aa15.6■□□□□ 0.09
NEDD1-202ENST00000411739 NARFQ9UHQ1 456 aa15.6■□□□□ 0.09
NEDD1-202ENST00000411739 NPM2Q86SE8 214 aaKnown RBP15.59■□□□□ 0.09
NEDD1-202ENST00000411739 NLGN1Q8N2Q7 840 aa15.59■□□□□ 0.09
NEDD1-202ENST00000411739 GNAI1P63096 354 aa15.59■□□□□ 0.09
NEDD1-202ENST00000411739 CCDC27Q2M243 656 aa15.58■□□□□ 0.09
NEDD1-202ENST00000411739 PROSER3Q2NL68 480 aa15.58■□□□□ 0.09
NEDD1-202ENST00000411739 CALD1Q05682 793 aaKnown RBP15.58■□□□□ 0.08
NEDD1-202ENST00000411739 DZIP3Q86Y13 1208 aaKnown RBP15.58■□□□□ 0.08
NEDD1-202ENST00000411739 NLGN2Q8NFZ4 835 aa15.58■□□□□ 0.08
NEDD1-202ENST00000411739 WWC3Q9ULE0 1092 aa15.58■□□□□ 0.08
NEDD1-202ENST00000411739 DDR1Q08345 913 aa15.57■□□□□ 0.08
NEDD1-202ENST00000411739 DUSP27Q5VZP5 1158 aa15.57■□□□□ 0.08
NEDD1-202ENST00000411739 C8orf58Q8NAV2 365 aa15.57■□□□□ 0.08
NEDD1-202ENST00000411739 SPINK5Q9NQ38 1064 aaPredicted RBP15.57■□□□□ 0.08
NEDD1-202ENST00000411739 A0A087WZG4 1122 aa15.57■□□□□ 0.08
NEDD1-202ENST00000411739 NFIXQ14938 502 aa15.56■□□□□ 0.08
NEDD1-202ENST00000411739 TTLL7Q6ZT98 887 aa15.56■□□□□ 0.08
NEDD1-202ENST00000411739 COL24A1Q17RW2 1714 aa15.56■□□□□ 0.08
NEDD1-202ENST00000411739 CAMTA2O94983 1202 aa15.56■□□□□ 0.08
NEDD1-202ENST00000411739 PDIA6Q15084 440 aa15.56■□□□□ 0.08
NEDD1-202ENST00000411739 TSPYL6Q8N831 410 aa15.56■□□□□ 0.08
NEDD1-202ENST00000411739 TBC1D9BQ66K14 1250 aa15.55■□□□□ 0.08
NEDD1-202ENST00000411739 PARP3Q9Y6F1 533 aa15.55■□□□□ 0.08
NEDD1-202ENST00000411739 TM4SF1P30408 202 aa15.55■□□□□ 0.08
NEDD1-202ENST00000411739 TCERG1O14776 1098 aaKnown RBP15.54■□□□□ 0.08
NEDD1-202ENST00000411739 AIMP1Q12904 312 aaKnown RBP15.54■□□□□ 0.08
NEDD1-202ENST00000411739 HLFQ16534 295 aa15.54■□□□□ 0.08
NEDD1-202ENST00000411739 HDGFL1Q5TGJ6 251 aa15.54■□□□□ 0.08
NEDD1-202ENST00000411739 CCDC24Q8N4L8 307 aa15.54■□□□□ 0.08
NEDD1-202ENST00000411739 LAMB4A4D0S4 1761 aa15.54■□□□□ 0.08
NEDD1-202ENST00000411739 CHPF2Q9P2E5 772 aa15.54■□□□□ 0.08
NEDD1-202ENST00000411739 GOLGB1Q14789 3259 aaKnown RBP15.53■□□□□ 0.08
NEDD1-202ENST00000411739 POLRMTO00411 1230 aaKnown RBP15.53■□□□□ 0.08
NEDD1-202ENST00000411739 ZBTB3Q9H5J0 574 aa15.53■□□□□ 0.08
NEDD1-202ENST00000411739 PELP1Q8IZL8 1130 aaKnown RBP15.53■□□□□ 0.08
NEDD1-202ENST00000411739 WDR63Q8IWG1 891 aa15.52■□□□□ 0.08
NEDD1-202ENST00000411739 UTRNP46939 3433 aa15.52■□□□□ 0.07
NEDD1-202ENST00000411739 FAM177BA6PVY3 158 aa15.52■□□□□ 0.07
NEDD1-202ENST00000411739 LRP10Q7Z4F1 713 aa15.52■□□□□ 0.07
NEDD1-202ENST00000411739 FANCIQ9NVI1 1328 aa15.52■□□□□ 0.07
NEDD1-202ENST00000411739 ZNF428Q96B54 188 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms