RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 ARHGEF1Q92888 912 aaKnown RBP21.47■■□□□ 1.03
NOD1-202ENST00000411552 TRIM35Q9UPQ4 493 aa21.47■■□□□ 1.03
NOD1-202ENST00000411552 STARD3NLO95772 234 aa21.46■■□□□ 1.03
NOD1-202ENST00000411552 ARXQ96QS3 562 aa21.46■■□□□ 1.03
NOD1-202ENST00000411552 TEX13AQ9BXU3 409 aaPredicted RBP21.46■■□□□ 1.03
NOD1-202ENST00000411552 ZBTB1Q9Y2K1 713 aa21.46■■□□□ 1.03
NOD1-202ENST00000411552 APAF1O14727 1248 aa21.45■■□□□ 1.02
NOD1-202ENST00000411552 SOS1Q07889 1333 aaPredicted RBP21.45■■□□□ 1.02
NOD1-202ENST00000411552 RFC4P35249 363 aa21.44■■□□□ 1.02
NOD1-202ENST00000411552 PRAMEF22A3QJZ6 481 aa21.43■■□□□ 1.02
NOD1-202ENST00000411552 SNRPA1P09661 255 aaKnown RBP21.43■■□□□ 1.02
NOD1-202ENST00000411552 CANXP27824 592 aaKnown RBP21.42■■□□□ 1.02
NOD1-202ENST00000411552 FHDC1Q9C0D6 1143 aaPredicted RBP21.42■■□□□ 1.02
NOD1-202ENST00000411552 COL15A1P39059 1388 aa21.41■■□□□ 1.02
NOD1-202ENST00000411552 TSPYL4Q9UJ04 414 aa21.41■■□□□ 1.02
NOD1-202ENST00000411552 USP16Q9Y5T5 823 aa21.41■■□□□ 1.02
NOD1-202ENST00000411552 GYS1P13807 737 aa21.4■■□□□ 1.02
NOD1-202ENST00000411552 EIF4A1P60842 406 aaKnown RBP21.4■■□□□ 1.02
NOD1-202ENST00000411552 SRP68Q9UHB9 627 aaKnown RBP21.4■■□□□ 1.02
NOD1-202ENST00000411552 USP42Q9H9J4 1324 aaKnown RBP21.39■■□□□ 1.01
NOD1-202ENST00000411552 A1BGP04217 495 aa21.39■■□□□ 1.01
NOD1-202ENST00000411552 BABAM1Q9NWV8 329 aa21.39■■□□□ 1.01
NOD1-202ENST00000411552 LAMB4A4D0S4 1761 aa21.38■■□□□ 1.01
NOD1-202ENST00000411552 EIF5P55010 431 aaKnown RBP21.38■■□□□ 1.01
NOD1-202ENST00000411552 SYT17Q9BSW7 474 aa21.38■■□□□ 1.01
NOD1-202ENST00000411552 GIGYF1O75420 1035 aaPredicted RBP21.37■■□□□ 1.01
NOD1-202ENST00000411552 NLGN1Q8N2Q7 840 aa21.37■■□□□ 1.01
NOD1-202ENST00000411552 CHL1O00533 1208 aa21.36■■□□□ 1.01
NOD1-202ENST00000411552 ZPR1O75312 459 aa21.36■■□□□ 1.01
NOD1-202ENST00000411552 MMP10P09238 476 aa21.36■■□□□ 1.01
NOD1-202ENST00000411552 IL6STP40189 918 aaPredicted RBP21.36■■□□□ 1.01
NOD1-202ENST00000411552 KLHL34Q8N239 644 aa21.36■■□□□ 1.01
NOD1-202ENST00000411552 SENP3-EIF4A1A0A087X0R7 540 aa21.35■■□□□ 1.01
NOD1-202ENST00000411552 PIP4K2AP48426 406 aaPredicted RBP21.35■■□□□ 1.01
NOD1-202ENST00000411552 FKBP8Q14318 412 aa21.35■■□□□ 1.01
NOD1-202ENST00000411552 NARFQ9UHQ1 456 aa21.35■■□□□ 1.01
NOD1-202ENST00000411552 ZNF330Q9Y3S2 320 aaPredicted RBP21.35■■□□□ 1.01
NOD1-202ENST00000411552 LAS1LQ9Y4W2 734 aaKnown RBP21.35■■□□□ 1.01
NOD1-202ENST00000411552 USPL1Q5W0Q7 1092 aa21.34■■□□□ 1.01
NOD1-202ENST00000411552 FAM9BQ8IZU0 186 aa21.34■■□□□ 1.01
NOD1-202ENST00000411552 A0A087WZG4 1122 aa21.33■■□□□ 1.01
NOD1-202ENST00000411552 NBPF26B4DH59 902 aa21.32■■□□□ 1
NOD1-202ENST00000411552 NBPF10Q6P3W6 841 aaKnown RBP21.32■■□□□ 1
NOD1-202ENST00000411552 NBPF15Q8N660 670 aa21.32■■□□□ 1
NOD1-202ENST00000411552 CFAP44Q96MT7 982 aa21.32■■□□□ 1
NOD1-202ENST00000411552 BCL2L12Q9HB09 334 aa21.31■■□□□ 1
NOD1-202ENST00000411552 TBC1D2BQ9UPU7 963 aa21.31■■□□□ 1
NOD1-202ENST00000411552 SCN7AQ01118 1682 aa21.31■■□□□ 1
NOD1-202ENST00000411552 ZNF853P0CG23 659 aa21.3■■□□□ 1
NOD1-202ENST00000411552 CALD1Q05682 793 aaKnown RBP21.3■■□□□ 1
NOD1-202ENST00000411552 NLGN2Q8NFZ4 835 aa21.3■■□□□ 1
NOD1-202ENST00000411552 DDR1Q08345 913 aa21.29■■□□□ 1
NOD1-202ENST00000411552 CCDC27Q2M243 656 aa21.29■■□□□ 1
NOD1-202ENST00000411552 KRT24Q2M2I5 525 aa21.29■■□□□ 1
NOD1-202ENST00000411552 NPM2Q86SE8 214 aaKnown RBP21.29■■□□□ 1
NOD1-202ENST00000411552 MBIPQ9NS73 344 aa21.29■■□□□ 1
NOD1-202ENST00000411552 IFT57Q9NWB7 429 aa21.29■■□□□ 1
NOD1-202ENST00000411552 CD2APQ9Y5K6 639 aa21.29■■□□□ 1
NOD1-202ENST00000411552 PARP3Q9Y6F1 533 aa21.29■■□□□ 1
NOD1-202ENST00000411552 WWC1Q8IX03 1113 aa21.28■■□□□ 1
NOD1-202ENST00000411552 BCORQ6W2J9 1755 aa21.28■■□□□ 1
NOD1-202ENST00000411552 GOLGB1Q14789 3259 aaKnown RBP21.28■■□□□ 1
NOD1-202ENST00000411552 TM4SF1P30408 202 aa21.27■■□□□ 1
NOD1-202ENST00000411552 GNAI1P63096 354 aa21.27■■□□□ 1
NOD1-202ENST00000411552 NCBP3Q53F19 620 aaKnown RBP21.27■■□□□ 1
NOD1-202ENST00000411552 DZIP3Q86Y13 1208 aaKnown RBP21.27■■□□□ 1
NOD1-202ENST00000411552 CAMTA2O94983 1202 aa21.26■□□□□ 0.99
NOD1-202ENST00000411552 NFIXQ14938 502 aa21.26■□□□□ 0.99
NOD1-202ENST00000411552 DIEXFQ68CQ4 756 aaKnown RBP21.26■□□□□ 0.99
NOD1-202ENST00000411552 KIF13BQ9NQT8 1826 aa21.26■□□□□ 0.99
NOD1-202ENST00000411552 CCER2I3L3R5 266 aa21.25■□□□□ 0.99
NOD1-202ENST00000411552 POLRMTO00411 1230 aaKnown RBP21.25■□□□□ 0.99
NOD1-202ENST00000411552 EIF2S2P20042 333 aaKnown RBP21.25■□□□□ 0.99
NOD1-202ENST00000411552 C10orf71Q711Q0 1435 aa21.24■□□□□ 0.99
NOD1-202ENST00000411552 SALL2Q9Y467 1007 aaPredicted RBP21.24■□□□□ 0.99
NOD1-202ENST00000411552 AFDNP55196 1824 aaKnown RBP21.24■□□□□ 0.99
NOD1-202ENST00000411552 ERBB4Q15303 1308 aa21.24■□□□□ 0.99
NOD1-202ENST00000411552 MYL6BP14649 208 aa21.23■□□□□ 0.99
NOD1-202ENST00000411552 TBC1D9BQ66K14 1250 aa21.23■□□□□ 0.99
NOD1-202ENST00000411552 NGEFQ8N5V2 710 aa21.23■□□□□ 0.99
NOD1-202ENST00000411552 PDIA6Q15084 440 aa21.22■□□□□ 0.99
NOD1-202ENST00000411552 BICDL1Q6ZP65 573 aa21.22■□□□□ 0.99
NOD1-202ENST00000411552 NECTIN2Q92692 538 aa21.22■□□□□ 0.99
NOD1-202ENST00000411552 NRXN2Q9P2S2 1712 aa21.21■□□□□ 0.99
NOD1-202ENST00000411552 DCAF8L1A6NGE4 600 aa21.21■□□□□ 0.99
NOD1-202ENST00000411552 HOXB7P09629 217 aa21.21■□□□□ 0.99
NOD1-202ENST00000411552 PROSER3Q2NL68 480 aa21.21■□□□□ 0.99
NOD1-202ENST00000411552 DUSP27Q5VZP5 1158 aa21.21■□□□□ 0.99
NOD1-202ENST00000411552 KIAA1551Q9HCM1 1747 aa21.21■□□□□ 0.99
NOD1-202ENST00000411552 UTRNP46939 3433 aa21.2■□□□□ 0.98
NOD1-202ENST00000411552 LRP10Q7Z4F1 713 aa21.2■□□□□ 0.98
NOD1-202ENST00000411552 IL16Q14005 1332 aa21.2■□□□□ 0.98
NOD1-202ENST00000411552 ANXA1P04083 346 aa21.19■□□□□ 0.98
NOD1-202ENST00000411552 SERPINB2P05120 415 aa21.19■□□□□ 0.98
NOD1-202ENST00000411552 CLEC4GQ6UXB4 293 aa21.19■□□□□ 0.98
NOD1-202ENST00000411552 TTLL7Q6ZT98 887 aa21.19■□□□□ 0.98
NOD1-202ENST00000411552 TSR2Q969E8 191 aaKnown RBP21.19■□□□□ 0.98
NOD1-202ENST00000411552 ZNF652Q9Y2D9 606 aa21.19■□□□□ 0.98
NOD1-202ENST00000411552 PXDNLA1KZ92 1463 aa21.19■□□□□ 0.98
NOD1-202ENST00000411552 N4BP2Q86UW6 1770 aaPredicted RBP21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms