RNA–Protein interactions for RNA: ENST00000410038.5

LIMS2-209, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-209ENST00000410038 EXOSC9Q06265 439 aaKnown RBP18.6■□□□□ 0.57
LIMS2-209ENST00000410038 DUSP27Q5VZP5 1158 aa18.6■□□□□ 0.57
LIMS2-209ENST00000410038 TEX13AQ9BXU3 409 aaPredicted RBP18.6■□□□□ 0.57
LIMS2-209ENST00000410038 ELL2O00472 640 aaPredicted RBP18.59■□□□□ 0.57
LIMS2-209ENST00000410038 CYP19A1P11511 503 aaPredicted RBP18.59■□□□□ 0.57
LIMS2-209ENST00000410038 TSPYL6Q8N831 410 aa18.59■□□□□ 0.57
LIMS2-209ENST00000410038 HOXB7P09629 217 aa18.57■□□□□ 0.56
LIMS2-209ENST00000410038 STARD3NLO95772 234 aa18.57■□□□□ 0.56
LIMS2-209ENST00000410038 UBR3Q6ZT12 1888 aa18.56■□□□□ 0.56
LIMS2-209ENST00000410038 TUBGCP6Q96RT7 1819 aa18.56■□□□□ 0.56
LIMS2-209ENST00000410038 CRKLP46109 303 aaKnown RBP18.56■□□□□ 0.56
LIMS2-209ENST00000410038 TWISTNBQ3B726 338 aaPredicted RBP18.56■□□□□ 0.56
LIMS2-209ENST00000410038 CNTNAP4Q9C0A0 1308 aa18.55■□□□□ 0.56
LIMS2-209ENST00000410038 HMGB2P26583 209 aaKnown RBP18.55■□□□□ 0.56
LIMS2-209ENST00000410038 SOS1Q07889 1333 aaPredicted RBP18.55■□□□□ 0.56
LIMS2-209ENST00000410038 A1BGP04217 495 aa18.54■□□□□ 0.56
LIMS2-209ENST00000410038 EIF2S2P20042 333 aaKnown RBP18.54■□□□□ 0.56
LIMS2-209ENST00000410038 RC3H1Q5TC82 1133 aaKnown RBP18.54■□□□□ 0.56
LIMS2-209ENST00000410038 INTS5Q6P9B9 1019 aaKnown RBP18.54■□□□□ 0.56
LIMS2-209ENST00000410038 ANO8Q9HCE9 1232 aaPredicted RBP18.54■□□□□ 0.56
LIMS2-209ENST00000410038 ZNF827Q17R98 1081 aa18.54■□□□□ 0.56
LIMS2-209ENST00000410038 NECTIN2Q92692 538 aa18.54■□□□□ 0.56
LIMS2-209ENST00000410038 AKT1S1Q96B36 256 aa18.54■□□□□ 0.56
LIMS2-209ENST00000410038 CCDC87Q9NVE4 849 aa18.54■□□□□ 0.56
LIMS2-209ENST00000410038 VAMP4O75379 141 aa18.53■□□□□ 0.56
LIMS2-209ENST00000410038 HDGFL1Q5TGJ6 251 aa18.53■□□□□ 0.56
LIMS2-209ENST00000410038 ZBTB1Q9Y2K1 713 aa18.53■□□□□ 0.56
LIMS2-209ENST00000410038 CACNA1FO60840 1977 aa18.53■□□□□ 0.56
LIMS2-209ENST00000410038 AK7Q96M32 723 aa18.52■□□□□ 0.56
LIMS2-209ENST00000410038 SPON1Q9HCB6 807 aa18.52■□□□□ 0.56
LIMS2-209ENST00000410038 PIP4K2AP48426 406 aaPredicted RBP18.51■□□□□ 0.55
LIMS2-209ENST00000410038 QSER1Q2KHR3 1735 aa18.51■□□□□ 0.55
LIMS2-209ENST00000410038 NBPF26B4DH59 902 aa18.5■□□□□ 0.55
LIMS2-209ENST00000410038 GNPATO15228 680 aa18.5■□□□□ 0.55
LIMS2-209ENST00000410038 CANXP27824 592 aaKnown RBP18.5■□□□□ 0.55
LIMS2-209ENST00000410038 SLC15A2Q16348 729 aa18.5■□□□□ 0.55
LIMS2-209ENST00000410038 NBPF10Q6P3W6 841 aaKnown RBP18.5■□□□□ 0.55
LIMS2-209ENST00000410038 AMIGO3Q86WK7 504 aa18.5■□□□□ 0.55
LIMS2-209ENST00000410038 NBPF15Q8N660 670 aa18.5■□□□□ 0.55
LIMS2-209ENST00000410038 STK32BQ9NY57 414 aa18.5■□□□□ 0.55
LIMS2-209ENST00000410038 RPS6KA4O75676 772 aa18.5■□□□□ 0.55
LIMS2-209ENST00000410038 ERBB4Q15303 1308 aa18.49■□□□□ 0.55
LIMS2-209ENST00000410038 PDIA6Q15084 440 aa18.49■□□□□ 0.55
LIMS2-209ENST00000410038 CCDC30Q5VVM6 783 aa18.49■□□□□ 0.55
LIMS2-209ENST00000410038 TFCP2L1Q9NZI6 479 aa18.49■□□□□ 0.55
LIMS2-209ENST00000410038 SMIM5Q71RC9 77 aa18.48■□□□□ 0.55
LIMS2-209ENST00000410038 CHMP4AQ9BY43 222 aa18.48■□□□□ 0.55
LIMS2-209ENST00000410038 CHPF2Q9P2E5 772 aa18.48■□□□□ 0.55
LIMS2-209ENST00000410038 RTCBQ9Y3I0 505 aaKnown RBP18.48■□□□□ 0.55
LIMS2-209ENST00000410038 C4AP0C0L4 1744 aa18.48■□□□□ 0.55
LIMS2-209ENST00000410038 ANXA1P04083 346 aa18.47■□□□□ 0.55
LIMS2-209ENST00000410038 CT47B1P0C2W7 299 aaPredicted RBP18.47■□□□□ 0.55
LIMS2-209ENST00000410038 IL6STP40189 918 aaPredicted RBP18.47■□□□□ 0.55
LIMS2-209ENST00000410038 PROSER3Q2NL68 480 aa18.47■□□□□ 0.55
LIMS2-209ENST00000410038 DDX21Q9NR30 783 aaKnown RBP eCLIP18.47■□□□□ 0.55
LIMS2-209ENST00000410038 DBF4Q9UBU7 674 aaPredicted RBP18.47■□□□□ 0.55
LIMS2-209ENST00000410038 PPP1R1BQ9UD71 204 aaPredicted RBP18.47■□□□□ 0.55
LIMS2-209ENST00000410038 TCERG1O14776 1098 aaKnown RBP18.47■□□□□ 0.55
LIMS2-209ENST00000410038 MYL6BP14649 208 aa18.47■□□□□ 0.55
LIMS2-209ENST00000410038 EIF5P55010 431 aaKnown RBP18.47■□□□□ 0.55
LIMS2-209ENST00000410038 DCAF8L1A6NGE4 600 aa18.46■□□□□ 0.55
LIMS2-209ENST00000410038 PHF14O94880 888 aa18.46■□□□□ 0.55
LIMS2-209ENST00000410038 SSFA2P28290 1259 aa18.46■□□□□ 0.55
LIMS2-209ENST00000410038 LRP10Q7Z4F1 713 aa18.46■□□□□ 0.55
LIMS2-209ENST00000410038 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.45■□□□□ 0.54
LIMS2-209ENST00000410038 ZNF428Q96B54 188 aa18.45■□□□□ 0.54
LIMS2-209ENST00000410038 ZNF330Q9Y3S2 320 aaPredicted RBP18.45■□□□□ 0.54
LIMS2-209ENST00000410038 PNPLA7Q6ZV29 1317 aa18.45■□□□□ 0.54
LIMS2-209ENST00000410038 COL15A1P39059 1388 aa18.45■□□□□ 0.54
LIMS2-209ENST00000410038 STK31Q9BXU1 1019 aa18.44■□□□□ 0.54
LIMS2-209ENST00000410038 ADRA2BP18089 450 aa18.44■□□□□ 0.54
LIMS2-209ENST00000410038 TRAPPC3LQ5T215 181 aa18.44■□□□□ 0.54
LIMS2-209ENST00000410038 ARHGEF1Q92888 912 aaKnown RBP18.44■□□□□ 0.54
LIMS2-209ENST00000410038 CASZ1Q86V15 1759 aa18.43■□□□□ 0.54
LIMS2-209ENST00000410038 SLC4A2P04920 1241 aa18.43■□□□□ 0.54
LIMS2-209ENST00000410038 COL23A1Q86Y22 540 aaPredicted RBP18.43■□□□□ 0.54
LIMS2-209ENST00000410038 FLAD1Q8NFF5 587 aa18.43■□□□□ 0.54
LIMS2-209ENST00000410038 HYPKQ9NX55 129 aa18.43■□□□□ 0.54
LIMS2-209ENST00000410038 SSH1Q8WYL5 1049 aa18.42■□□□□ 0.54
LIMS2-209ENST00000410038 RARSP54136 660 aaKnown RBP18.41■□□□□ 0.54
LIMS2-209ENST00000410038 ALDH1L2Q3SY69 923 aa18.41■□□□□ 0.54
LIMS2-209ENST00000410038 NPM2Q86SE8 214 aaKnown RBP18.41■□□□□ 0.54
LIMS2-209ENST00000410038 PHAXQ9H814 394 aaKnown RBP18.41■□□□□ 0.54
LIMS2-209ENST00000410038 BCORQ6W2J9 1755 aa18.41■□□□□ 0.54
LIMS2-209ENST00000410038 TTLL7Q6ZT98 887 aa18.41■□□□□ 0.54
LIMS2-209ENST00000410038 COPS6Q7L5N1 327 aa18.41■□□□□ 0.54
LIMS2-209ENST00000410038 XAGE3Q8WTP9 111 aa18.41■□□□□ 0.54
LIMS2-209ENST00000410038 BCL2L13Q9BXK5 485 aa18.41■□□□□ 0.54
LIMS2-209ENST00000410038 TBC1D2BQ9UPU7 963 aa18.41■□□□□ 0.54
LIMS2-209ENST00000410038 A0A087WZG4 1122 aa18.4■□□□□ 0.54
LIMS2-209ENST00000410038 RFC4P35249 363 aa18.4■□□□□ 0.54
LIMS2-209ENST00000410038 G2E3Q7L622 706 aa18.4■□□□□ 0.54
LIMS2-209ENST00000410038 DZIP3Q86Y13 1208 aaKnown RBP18.4■□□□□ 0.54
LIMS2-209ENST00000410038 MRPL50Q8N5N7 158 aaKnown RBP18.4■□□□□ 0.54
LIMS2-209ENST00000410038 PDGFDQ9GZP0 370 aaPredicted RBP18.4■□□□□ 0.54
LIMS2-209ENST00000410038 SCN7AQ01118 1682 aa18.4■□□□□ 0.54
LIMS2-209ENST00000410038 NUP98P52948 1817 aa18.39■□□□□ 0.54
LIMS2-209ENST00000410038 MSH5O43196 834 aa18.39■□□□□ 0.53
LIMS2-209ENST00000410038 AIMP1Q12904 312 aaKnown RBP18.39■□□□□ 0.53
LIMS2-209ENST00000410038 ARXQ96QS3 562 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms