RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 CNTNAP4Q9C0A0 1308 aa21.5■■□□□ 1.03
SUMO1-208ENST00000409627 STARD3NLO95772 234 aa21.49■■□□□ 1.03
SUMO1-208ENST00000409627 CYP19A1P11511 503 aaPredicted RBP21.49■■□□□ 1.03
SUMO1-208ENST00000409627 USP16Q9Y5T5 823 aa21.49■■□□□ 1.03
SUMO1-208ENST00000409627 QSER1Q2KHR3 1735 aa21.49■■□□□ 1.03
SUMO1-208ENST00000409627 TUBGCP6Q96RT7 1819 aa21.48■■□□□ 1.03
SUMO1-208ENST00000409627 UBR3Q6ZT12 1888 aa21.48■■□□□ 1.03
SUMO1-208ENST00000409627 TWISTNBQ3B726 338 aaPredicted RBP21.48■■□□□ 1.03
SUMO1-208ENST00000409627 TSPYL6Q8N831 410 aa21.48■■□□□ 1.03
SUMO1-208ENST00000409627 RC3H1Q5TC82 1133 aaKnown RBP21.47■■□□□ 1.03
SUMO1-208ENST00000409627 ELL2O00472 640 aaPredicted RBP21.46■■□□□ 1.03
SUMO1-208ENST00000409627 CRKLP46109 303 aaKnown RBP21.46■■□□□ 1.03
SUMO1-208ENST00000409627 CHMP4AQ9BY43 222 aa21.45■■□□□ 1.02
SUMO1-208ENST00000409627 CCDC87Q9NVE4 849 aa21.45■■□□□ 1.02
SUMO1-208ENST00000409627 ERBB4Q15303 1308 aa21.45■■□□□ 1.02
SUMO1-208ENST00000409627 CACNA1FO60840 1977 aa21.45■■□□□ 1.02
SUMO1-208ENST00000409627 VAMP4O75379 141 aa21.44■■□□□ 1.02
SUMO1-208ENST00000409627 HDGFL1Q5TGJ6 251 aa21.44■■□□□ 1.02
SUMO1-208ENST00000409627 INTS5Q6P9B9 1019 aaKnown RBP21.44■■□□□ 1.02
SUMO1-208ENST00000409627 AKT1S1Q96B36 256 aa21.44■■□□□ 1.02
SUMO1-208ENST00000409627 CT47B1P0C2W7 299 aaPredicted RBP21.43■■□□□ 1.02
SUMO1-208ENST00000409627 EIF2S2P20042 333 aaKnown RBP21.43■■□□□ 1.02
SUMO1-208ENST00000409627 ZNF827Q17R98 1081 aa21.43■■□□□ 1.02
SUMO1-208ENST00000409627 AK7Q96M32 723 aa21.43■■□□□ 1.02
SUMO1-208ENST00000409627 ANO8Q9HCE9 1232 aaPredicted RBP21.42■■□□□ 1.02
SUMO1-208ENST00000409627 ZBTB1Q9Y2K1 713 aa21.42■■□□□ 1.02
SUMO1-208ENST00000409627 A1BGP04217 495 aa21.41■■□□□ 1.02
SUMO1-208ENST00000409627 NBPF14Q5TI25 921 aa21.41■■□□□ 1.02
SUMO1-208ENST00000409627 CCDC30Q5VVM6 783 aa21.41■■□□□ 1.02
SUMO1-208ENST00000409627 ZNF428Q96B54 188 aa21.41■■□□□ 1.02
SUMO1-208ENST00000409627 STK32BQ9NY57 414 aa21.41■■□□□ 1.02
SUMO1-208ENST00000409627 C4AP0C0L4 1744 aa21.41■■□□□ 1.02
SUMO1-208ENST00000409627 GNPATO15228 680 aa21.4■■□□□ 1.02
SUMO1-208ENST00000409627 RPS6KA4O75676 772 aa21.4■■□□□ 1.02
SUMO1-208ENST00000409627 SLC15A2Q16348 729 aa21.4■■□□□ 1.02
SUMO1-208ENST00000409627 NBPF26B4DH59 902 aa21.39■■□□□ 1.01
SUMO1-208ENST00000409627 IL6STP40189 918 aaPredicted RBP21.39■■□□□ 1.01
SUMO1-208ENST00000409627 NBPF10Q6P3W6 841 aaKnown RBP21.39■■□□□ 1.01
SUMO1-208ENST00000409627 NBPF15Q8N660 670 aa21.39■■□□□ 1.01
SUMO1-208ENST00000409627 NECTIN2Q92692 538 aa21.39■■□□□ 1.01
SUMO1-208ENST00000409627 CANXP27824 592 aaKnown RBP21.38■■□□□ 1.01
SUMO1-208ENST00000409627 PDIA6Q15084 440 aa21.38■■□□□ 1.01
SUMO1-208ENST00000409627 DDX21Q9NR30 783 aaKnown RBP eCLIP21.38■■□□□ 1.01
SUMO1-208ENST00000409627 CHPF2Q9P2E5 772 aa21.38■■□□□ 1.01
SUMO1-208ENST00000409627 DBF4Q9UBU7 674 aaPredicted RBP21.38■■□□□ 1.01
SUMO1-208ENST00000409627 RTCBQ9Y3I0 505 aaKnown RBP21.38■■□□□ 1.01
SUMO1-208ENST00000409627 SSFA2P28290 1259 aa21.37■■□□□ 1.01
SUMO1-208ENST00000409627 TFCP2L1Q9NZI6 479 aa21.37■■□□□ 1.01
SUMO1-208ENST00000409627 COL15A1P39059 1388 aa21.36■■□□□ 1.01
SUMO1-208ENST00000409627 ADRA2BP18089 450 aa21.36■■□□□ 1.01
SUMO1-208ENST00000409627 PIP4K2AP48426 406 aaPredicted RBP21.36■■□□□ 1.01
SUMO1-208ENST00000409627 EIF5P55010 431 aaKnown RBP21.36■■□□□ 1.01
SUMO1-208ENST00000409627 STK31Q9BXU1 1019 aa21.36■■□□□ 1.01
SUMO1-208ENST00000409627 BCORQ6W2J9 1755 aa21.36■■□□□ 1.01
SUMO1-208ENST00000409627 PROSER3Q2NL68 480 aa21.35■■□□□ 1.01
SUMO1-208ENST00000409627 LRP10Q7Z4F1 713 aa21.35■■□□□ 1.01
SUMO1-208ENST00000409627 AMIGO3Q86WK7 504 aa21.35■■□□□ 1.01
SUMO1-208ENST00000409627 FLAD1Q8NFF5 587 aa21.35■■□□□ 1.01
SUMO1-208ENST00000409627 SCN7AQ01118 1682 aa21.34■■□□□ 1.01
SUMO1-208ENST00000409627 MYL6BP14649 208 aa21.34■■□□□ 1.01
SUMO1-208ENST00000409627 ALDH1L2Q3SY69 923 aa21.34■■□□□ 1.01
SUMO1-208ENST00000409627 HYPKQ9NX55 129 aa21.34■■□□□ 1.01
SUMO1-208ENST00000409627 CASZ1Q86V15 1759 aa21.33■■□□□ 1.01
SUMO1-208ENST00000409627 PNPLA7Q6ZV29 1317 aa21.33■■□□□ 1.01
SUMO1-208ENST00000409627 A0A087WZG4 1122 aa21.33■■□□□ 1.01
SUMO1-208ENST00000409627 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.33■■□□□ 1.01
SUMO1-208ENST00000409627 ANXA1P04083 346 aa21.33■■□□□ 1.01
SUMO1-208ENST00000409627 TCERG1O14776 1098 aaKnown RBP21.32■■□□□ 1
SUMO1-208ENST00000409627 PHF14O94880 888 aa21.32■■□□□ 1
SUMO1-208ENST00000409627 TRAPPC3LQ5T215 181 aa21.32■■□□□ 1
SUMO1-208ENST00000409627 NPM2Q86SE8 214 aaKnown RBP21.32■■□□□ 1
SUMO1-208ENST00000409627 SLC4A2P04920 1241 aa21.31■■□□□ 1
SUMO1-208ENST00000409627 RARSP54136 660 aaKnown RBP21.31■■□□□ 1
SUMO1-208ENST00000409627 SSH1Q8WYL5 1049 aa21.31■■□□□ 1
SUMO1-208ENST00000409627 ARHGEF1Q92888 912 aaKnown RBP21.31■■□□□ 1
SUMO1-208ENST00000409627 ZNF330Q9Y3S2 320 aaPredicted RBP21.31■■□□□ 1
SUMO1-208ENST00000409627 SMIM5Q71RC9 77 aa21.3■■□□□ 1
SUMO1-208ENST00000409627 COL23A1Q86Y22 540 aaPredicted RBP21.29■■□□□ 1
SUMO1-208ENST00000409627 MRPL50Q8N5N7 158 aaKnown RBP21.29■■□□□ 1
SUMO1-208ENST00000409627 ARFGEF2Q9Y6D5 1785 aa21.28■■□□□ 1
SUMO1-208ENST00000409627 NUP98P52948 1817 aa21.28■■□□□ 1
SUMO1-208ENST00000409627 RFC4P35249 363 aa21.28■■□□□ 1
SUMO1-208ENST00000409627 BRPF1P55201 1214 aaPredicted RBP21.28■■□□□ 1
SUMO1-208ENST00000409627 R3HDM1Q15032 1099 aaKnown RBP21.28■■□□□ 1
SUMO1-208ENST00000409627 COPS6Q7L5N1 327 aa21.28■■□□□ 1
SUMO1-208ENST00000409627 DZIP3Q86Y13 1208 aaKnown RBP21.28■■□□□ 1
SUMO1-208ENST00000409627 XAGE3Q8WTP9 111 aa21.28■■□□□ 1
SUMO1-208ENST00000409627 PHAXQ9H814 394 aaKnown RBP21.28■■□□□ 1
SUMO1-208ENST00000409627 SMC4Q9NTJ3 1288 aa21.28■■□□□ 1
SUMO1-208ENST00000409627 NARFQ9UHQ1 456 aa21.28■■□□□ 1
SUMO1-208ENST00000409627 USP42Q9H9J4 1324 aaKnown RBP21.28■■□□□ 1
SUMO1-208ENST00000409627 BCL2L13Q9BXK5 485 aa21.27■■□□□ 1
SUMO1-208ENST00000409627 ANKRD36CQ5JPF3 1778 aa21.26■□□□□ 0.99
SUMO1-208ENST00000409627 RGL2O15211 777 aa21.26■□□□□ 0.99
SUMO1-208ENST00000409627 FLIIQ13045 1269 aa21.26■□□□□ 0.99
SUMO1-208ENST00000409627 KIF6Q6ZMV9 814 aa21.26■□□□□ 0.99
SUMO1-208ENST00000409627 TTLL7Q6ZT98 887 aa21.26■□□□□ 0.99
SUMO1-208ENST00000409627 G2E3Q7L622 706 aa21.26■□□□□ 0.99
SUMO1-208ENST00000409627 TBC1D2BQ9UPU7 963 aa21.26■□□□□ 0.99
SUMO1-208ENST00000409627 MAP3K15Q6ZN16 1313 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms