RNA–Protein interactions for RNA: ENST00000409368.5

SUMO1-206, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 4 BASIC

Gene SUMO1, Length 1,187 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-206ENST00000409368 TEX13AQ9BXU3 409 aaPredicted RBP17.17■□□□□ 0.34
SUMO1-206ENST00000409368 KDM3BQ7LBC6 1761 aa17.17■□□□□ 0.34
SUMO1-206ENST00000409368 FMNL2Q96PY5 1086 aa17.16■□□□□ 0.34
SUMO1-206ENST00000409368 USP42Q9H9J4 1324 aaKnown RBP17.16■□□□□ 0.34
SUMO1-206ENST00000409368 CHD4Q14839 1912 aa17.15■□□□□ 0.34
SUMO1-206ENST00000409368 BTBD11A6QL63 1104 aa17.15■□□□□ 0.34
SUMO1-206ENST00000409368 NEFMP07197 916 aa17.15■□□□□ 0.34
SUMO1-206ENST00000409368 RFC4P35249 363 aa17.15■□□□□ 0.34
SUMO1-206ENST00000409368 MCM10Q7L590 875 aa17.15■□□□□ 0.34
SUMO1-206ENST00000409368 KIAA1551Q9HCM1 1747 aa17.14■□□□□ 0.33
SUMO1-206ENST00000409368 STARD3NLO95772 234 aa17.14■□□□□ 0.33
SUMO1-206ENST00000409368 EIF5P55010 431 aaKnown RBP17.13■□□□□ 0.33
SUMO1-206ENST00000409368 TAF7Q15545 349 aaPredicted RBP17.13■□□□□ 0.33
SUMO1-206ENST00000409368 NLGN2Q8NFZ4 835 aa17.13■□□□□ 0.33
SUMO1-206ENST00000409368 ZBTB1Q9Y2K1 713 aa17.13■□□□□ 0.33
SUMO1-206ENST00000409368 COL15A1P39059 1388 aa17.13■□□□□ 0.33
SUMO1-206ENST00000409368 ZNF316A6NFI3 1004 aaPredicted RBP17.12■□□□□ 0.33
SUMO1-206ENST00000409368 KCNQ3O43525 872 aa17.12■□□□□ 0.33
SUMO1-206ENST00000409368 MMP10P09238 476 aa17.12■□□□□ 0.33
SUMO1-206ENST00000409368 DCTN1Q14203 1278 aa17.12■□□□□ 0.33
SUMO1-206ENST00000409368 MAPK8IP3Q9UPT6 1336 aa17.12■□□□□ 0.33
SUMO1-206ENST00000409368 NRXN2Q9P2S2 1712 aa17.12■□□□□ 0.33
SUMO1-206ENST00000409368 C10orf71Q711Q0 1435 aa17.12■□□□□ 0.33
SUMO1-206ENST00000409368 LAMB4A4D0S4 1761 aa17.11■□□□□ 0.33
SUMO1-206ENST00000409368 PNISRQ8TF01 805 aaKnown RBP17.11■□□□□ 0.33
SUMO1-206ENST00000409368 NARFQ9UHQ1 456 aa17.11■□□□□ 0.33
SUMO1-206ENST00000409368 SCN7AQ01118 1682 aa17.1■□□□□ 0.33
SUMO1-206ENST00000409368 TM4SF1P30408 202 aa17.1■□□□□ 0.33
SUMO1-206ENST00000409368 IL6STP40189 918 aaPredicted RBP17.1■□□□□ 0.33
SUMO1-206ENST00000409368 SNRPA1P09661 255 aaKnown RBP17.09■□□□□ 0.33
SUMO1-206ENST00000409368 BABAM1Q9NWV8 329 aa17.09■□□□□ 0.33
SUMO1-206ENST00000409368 SRP68Q9UHB9 627 aaKnown RBP17.09■□□□□ 0.33
SUMO1-206ENST00000409368 BRCA1P38398 1863 aaKnown RBP17.09■□□□□ 0.33
SUMO1-206ENST00000409368 TMPOP42166 694 aaKnown RBP17.08■□□□□ 0.32
SUMO1-206ENST00000409368 FKBP8Q14318 412 aa17.08■□□□□ 0.32
SUMO1-206ENST00000409368 BCL2L12Q9HB09 334 aa17.08■□□□□ 0.32
SUMO1-206ENST00000409368 AFDNP55196 1824 aaKnown RBP17.07■□□□□ 0.32
SUMO1-206ENST00000409368 BCORQ6W2J9 1755 aa17.07■□□□□ 0.32
SUMO1-206ENST00000409368 A0A087WZG4 1122 aa17.07■□□□□ 0.32
SUMO1-206ENST00000409368 RUNDC1Q96C34 613 aa17.07■□□□□ 0.32
SUMO1-206ENST00000409368 ADAMTS8Q9UP79 889 aa17.07■□□□□ 0.32
SUMO1-206ENST00000409368 USP16Q9Y5T5 823 aa17.07■□□□□ 0.32
SUMO1-206ENST00000409368 PXDNLA1KZ92 1463 aa17.06■□□□□ 0.32
SUMO1-206ENST00000409368 RGL2O15211 777 aa17.06■□□□□ 0.32
SUMO1-206ENST00000409368 ZPR1O75312 459 aa17.06■□□□□ 0.32
SUMO1-206ENST00000409368 TGFB2P61812 414 aa17.06■□□□□ 0.32
SUMO1-206ENST00000409368 DDR1Q08345 913 aa17.06■□□□□ 0.32
SUMO1-206ENST00000409368 LMOD3Q0VAK6 560 aa17.06■□□□□ 0.32
SUMO1-206ENST00000409368 POLRMTO00411 1230 aaKnown RBP17.05■□□□□ 0.32
SUMO1-206ENST00000409368 CANXP27824 592 aaKnown RBP17.05■□□□□ 0.32
SUMO1-206ENST00000409368 RIPK4P57078 832 aa17.05■□□□□ 0.32
SUMO1-206ENST00000409368 EIF4A1P60842 406 aaKnown RBP17.05■□□□□ 0.32
SUMO1-206ENST00000409368 WDR43Q15061 677 aaKnown RBP eCLIP17.05■□□□□ 0.32
SUMO1-206ENST00000409368 USPL1Q5W0Q7 1092 aa17.05■□□□□ 0.32
SUMO1-206ENST00000409368 KLHL34Q8N239 644 aa17.05■□□□□ 0.32
SUMO1-206ENST00000409368 PARP3Q9Y6F1 533 aa17.05■□□□□ 0.32
SUMO1-206ENST00000409368 A1BGP04217 495 aa17.04■□□□□ 0.32
SUMO1-206ENST00000409368 YBX3P16989 372 aaKnown RBP eCLIP17.04■□□□□ 0.32
SUMO1-206ENST00000409368 N4BP2Q86UW6 1770 aaPredicted RBP17.04■□□□□ 0.32
SUMO1-206ENST00000409368 PRAMEF22A3QJZ6 481 aa17.03■□□□□ 0.32
SUMO1-206ENST00000409368 GRIN3BO60391 1043 aa17.03■□□□□ 0.32
SUMO1-206ENST00000409368 GIGYF1O75420 1035 aaPredicted RBP17.03■□□□□ 0.32
SUMO1-206ENST00000409368 GPR162Q16538 588 aa17.03■□□□□ 0.32
SUMO1-206ENST00000409368 THUMPD2Q9BTF0 503 aaKnown RBP17.03■□□□□ 0.32
SUMO1-206ENST00000409368 NFIXQ14938 502 aa17.02■□□□□ 0.32
SUMO1-206ENST00000409368 MIS18AQ9NYP9 233 aa17.02■□□□□ 0.32
SUMO1-206ENST00000409368 TRIM35Q9UPQ4 493 aa17.02■□□□□ 0.32
SUMO1-206ENST00000409368 ARFGEF1Q9Y6D6 1849 aa17.01■□□□□ 0.31
SUMO1-206ENST00000409368 NBPF26B4DH59 902 aa17.01■□□□□ 0.31
SUMO1-206ENST00000409368 CAMTA2O94983 1202 aa17.01■□□□□ 0.31
SUMO1-206ENST00000409368 YY1P25490 414 aa17.01■□□□□ 0.31
SUMO1-206ENST00000409368 NBPF10Q6P3W6 841 aaKnown RBP17.01■□□□□ 0.31
SUMO1-206ENST00000409368 NBPF15Q8N660 670 aa17.01■□□□□ 0.31
SUMO1-206ENST00000409368 DLEC1Q9Y238 1755 aa17■□□□□ 0.31
SUMO1-206ENST00000409368 CLEC4GQ6UXB4 293 aa17■□□□□ 0.31
SUMO1-206ENST00000409368 CCDC146Q8IYE0 955 aa17■□□□□ 0.31
SUMO1-206ENST00000409368 ERBB4Q15303 1308 aa16.99■□□□□ 0.31
SUMO1-206ENST00000409368 CHL1O00533 1208 aa16.99■□□□□ 0.31
SUMO1-206ENST00000409368 KCNA3P22001 575 aa16.99■□□□□ 0.31
SUMO1-206ENST00000409368 ANKRD31Q8N7Z5 1873 aa16.97■□□□□ 0.31
SUMO1-206ENST00000409368 DZIP3Q86Y13 1208 aaKnown RBP16.97■□□□□ 0.31
SUMO1-206ENST00000409368 TSPYL4Q9UJ04 414 aa16.97■□□□□ 0.31
SUMO1-206ENST00000409368 TBC1D2BQ9UPU7 963 aa16.97■□□□□ 0.31
SUMO1-206ENST00000409368 SERPINB2P05120 415 aa16.96■□□□□ 0.31
SUMO1-206ENST00000409368 DPEP1P16444 411 aa16.96■□□□□ 0.31
SUMO1-206ENST00000409368 CCDC184Q52MB2 194 aa16.96■□□□□ 0.31
SUMO1-206ENST00000409368 TBC1D9BQ66K14 1250 aa16.96■□□□□ 0.31
SUMO1-206ENST00000409368 RRP7AQ9Y3A4 280 aaKnown RBP16.96■□□□□ 0.31
SUMO1-206ENST00000409368 CARMIL3Q8ND23 1372 aa16.96■□□□□ 0.31
SUMO1-206ENST00000409368 A0A0G2JLW4 131 aa16.95■□□□□ 0.3
SUMO1-206ENST00000409368 NUP98P52948 1817 aa16.95■□□□□ 0.3
SUMO1-206ENST00000409368 ZNF853P0CG23 659 aa16.94■□□□□ 0.3
SUMO1-206ENST00000409368 LRP10Q7Z4F1 713 aa16.94■□□□□ 0.3
SUMO1-206ENST00000409368 NPM2Q86SE8 214 aaKnown RBP16.94■□□□□ 0.3
SUMO1-206ENST00000409368 CFAP44Q96MT7 982 aa16.94■□□□□ 0.3
SUMO1-206ENST00000409368 ERVV-1B6SEH8 477 aa16.93■□□□□ 0.3
SUMO1-206ENST00000409368 APAF1O14727 1248 aa16.93■□□□□ 0.3
SUMO1-206ENST00000409368 ANP32CO43423 234 aa16.93■□□□□ 0.3
SUMO1-206ENST00000409368 HOXB7P09629 217 aa16.93■□□□□ 0.3
SUMO1-206ENST00000409368 PIP4K2AP48426 406 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms