RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 UBE2Q2Q8WVN8 375 aa14□□□□□ -0.17
SHANK2-203ENST00000409161 ACTN2P35609 894 aa13.99□□□□□ -0.17
SHANK2-203ENST00000409161 PIP4K2BP78356 416 aa13.99□□□□□ -0.17
SHANK2-203ENST00000409161 CCDC12Q8WUD4 166 aaPredicted RBP13.99□□□□□ -0.17
SHANK2-203ENST00000409161 CTNNBL1Q8WYA6 563 aaPredicted RBP13.99□□□□□ -0.17
SHANK2-203ENST00000409161 PRKAR2BP31323 418 aa13.99□□□□□ -0.17
SHANK2-203ENST00000409161 PTPRGP23470 1445 aa13.99□□□□□ -0.17
SHANK2-203ENST00000409161 PABPN1LA6NDY0 278 aaKnown RBP13.99□□□□□ -0.17
SHANK2-203ENST00000409161 KIF4AO95239 1232 aa13.99□□□□□ -0.17
SHANK2-203ENST00000409161 CCDC6Q16204 474 aa13.99□□□□□ -0.17
SHANK2-203ENST00000409161 UBE2HP62256 183 aa13.99□□□□□ -0.17
SHANK2-203ENST00000409161 NAP1L3Q99457 506 aaPredicted RBP13.99□□□□□ -0.17
SHANK2-203ENST00000409161 SELENOOQ9BVL4 669 aa13.99□□□□□ -0.17
SHANK2-203ENST00000409161 CPSF2Q9P2I0 782 aaKnown RBP13.99□□□□□ -0.17
SHANK2-203ENST00000409161 CAMK4Q16566 473 aa13.98□□□□□ -0.17
SHANK2-203ENST00000409161 KIF1BPQ96EK5 621 aa13.98□□□□□ -0.17
SHANK2-203ENST00000409161 A0A1W2PRG0 241 aa13.98□□□□□ -0.17
SHANK2-203ENST00000409161 KDM4AO75164 1064 aa13.98□□□□□ -0.17
SHANK2-203ENST00000409161 FKBP4Q02790 459 aaKnown RBP eCLIP13.98□□□□□ -0.17
SHANK2-203ENST00000409161 AIDAQ96BJ3 306 aa13.98□□□□□ -0.17
SHANK2-203ENST00000409161 IQCGQ9H095 443 aaKnown RBP13.98□□□□□ -0.17
SHANK2-203ENST00000409161 SWAP70Q9UH65 585 aa13.98□□□□□ -0.17
SHANK2-203ENST00000409161 ANKRD30BQ9BXX2 1392 aa13.98□□□□□ -0.17
SHANK2-203ENST00000409161 A6NNZ2 444 aa13.98□□□□□ -0.17
SHANK2-203ENST00000409161 TUBB8Q3ZCM7 444 aa13.98□□□□□ -0.17
SHANK2-203ENST00000409161 NCOA2Q15596 1464 aa13.98□□□□□ -0.17
SHANK2-203ENST00000409161 ERBINQ96RT1 1412 aa13.98□□□□□ -0.17
SHANK2-203ENST00000409161 SRGAP3O43295 1099 aa13.98□□□□□ -0.17
SHANK2-203ENST00000409161 EXOSC9Q06265 439 aaKnown RBP13.98□□□□□ -0.17
SHANK2-203ENST00000409161 CEP83Q9Y592 693 aa13.97□□□□□ -0.17
SHANK2-203ENST00000409161 ABCC11Q96J66 1382 aa13.97□□□□□ -0.17
SHANK2-203ENST00000409161 CCDC141Q6ZP82 1450 aa13.97□□□□□ -0.17
SHANK2-203ENST00000409161 IRX3P78415 501 aaPredicted RBP13.97□□□□□ -0.17
SHANK2-203ENST00000409161 DHX37Q8IY37 1157 aaKnown RBP13.97□□□□□ -0.17
SHANK2-203ENST00000409161 JADE2Q9NQC1 790 aa13.97□□□□□ -0.17
SHANK2-203ENST00000409161 C1orf115Q9H7X2 142 aa13.97□□□□□ -0.17
SHANK2-203ENST00000409161 CNNM3Q8NE01 707 aa13.97□□□□□ -0.17
SHANK2-203ENST00000409161 SMC6Q96SB8 1091 aa13.97□□□□□ -0.17
SHANK2-203ENST00000409161 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.97□□□□□ -0.17
SHANK2-203ENST00000409161 KIAA0753Q2KHM9 967 aa13.97□□□□□ -0.17
SHANK2-203ENST00000409161 RMND1Q9NWS8 449 aa13.97□□□□□ -0.17
SHANK2-203ENST00000409161 RSRC1Q96IZ7 334 aaKnown RBP13.97□□□□□ -0.17
SHANK2-203ENST00000409161 RNF41Q9H4P4 317 aaPredicted RBP13.97□□□□□ -0.17
SHANK2-203ENST00000409161 ANAPC4Q9UJX5 808 aa13.97□□□□□ -0.17
SHANK2-203ENST00000409161 RPGRIP1LQ68CZ1 1315 aa13.97□□□□□ -0.17
SHANK2-203ENST00000409161 MAPK8IP2Q13387 824 aaPredicted RBP13.96□□□□□ -0.17
SHANK2-203ENST00000409161 GAPVD1Q14C86 1478 aa13.96□□□□□ -0.17
SHANK2-203ENST00000409161 TDRD12Q587J7 1177 aaKnown RBP13.96□□□□□ -0.17
SHANK2-203ENST00000409161 PRDM10Q9NQV6 1147 aa13.96□□□□□ -0.17
SHANK2-203ENST00000409161 CEP126Q9P2H0 1117 aa13.96□□□□□ -0.17
SHANK2-203ENST00000409161 CTAGE9A4FU28 777 aa13.96□□□□□ -0.17
SHANK2-203ENST00000409161 JAKMIP2Q96AA8 810 aa13.96□□□□□ -0.17
SHANK2-203ENST00000409161 SSX2IPQ9Y2D8 614 aa13.96□□□□□ -0.17
SHANK2-203ENST00000409161 HS1BP3Q53T59 392 aa13.96□□□□□ -0.17
SHANK2-203ENST00000409161 PIBF1Q8WXW3 757 aa13.96□□□□□ -0.17
SHANK2-203ENST00000409161 ZNF692Q9BU19 519 aaPredicted RBP13.96□□□□□ -0.17
SHANK2-203ENST00000409161 ADCY5O95622 1261 aa13.96□□□□□ -0.18
SHANK2-203ENST00000409161 FERMT2Q96AC1 680 aa13.96□□□□□ -0.18
SHANK2-203ENST00000409161 CCDC77Q9BR77 488 aa13.96□□□□□ -0.18
SHANK2-203ENST00000409161 LIMCH1Q9UPQ0 1083 aa13.96□□□□□ -0.18
SHANK2-203ENST00000409161 KLHL10Q6JEL2 608 aa13.96□□□□□ -0.18
SHANK2-203ENST00000409161 USP37Q86T82 979 aa13.95□□□□□ -0.18
SHANK2-203ENST00000409161 FMNL3Q8IVF7 1028 aa13.95□□□□□ -0.18
SHANK2-203ENST00000409161 CCDC110Q8TBZ0 833 aa13.95□□□□□ -0.18
SHANK2-203ENST00000409161 ABTB2Q8N961 1025 aa13.95□□□□□ -0.18
SHANK2-203ENST00000409161 RAB3IL1Q8TBN0 382 aa13.95□□□□□ -0.18
SHANK2-203ENST00000409161 JPH4Q96JJ6 628 aa13.95□□□□□ -0.18
SHANK2-203ENST00000409161 KIF3CO14782 793 aa13.95□□□□□ -0.18
SHANK2-203ENST00000409161 DNAJC21Q5F1R6 531 aaKnown RBP13.95□□□□□ -0.18
SHANK2-203ENST00000409161 TBC1D5Q92609 795 aa13.95□□□□□ -0.18
SHANK2-203ENST00000409161 ZSCAN16Q9H4T2 348 aaPredicted RBP13.95□□□□□ -0.18
SHANK2-203ENST00000409161 ATP2A1O14983 1001 aa13.95□□□□□ -0.18
SHANK2-203ENST00000409161 STIM2Q9P246 746 aa13.95□□□□□ -0.18
SHANK2-203ENST00000409161 ZFYP08048 801 aaPredicted RBP13.95□□□□□ -0.18
SHANK2-203ENST00000409161 TATP17735 454 aaPredicted RBP13.95□□□□□ -0.18
SHANK2-203ENST00000409161 CEP128Q6ZU80 1094 aa13.95□□□□□ -0.18
SHANK2-203ENST00000409161 CTCFLQ8NI51 663 aaPredicted RBP13.95□□□□□ -0.18
SHANK2-203ENST00000409161 CALML4Q96GE6 196 aa13.95□□□□□ -0.18
SHANK2-203ENST00000409161 SPG7Q9UQ90 795 aa13.95□□□□□ -0.18
SHANK2-203ENST00000409161 FAM135AQ9P2D6 1515 aa13.95□□□□□ -0.18
SHANK2-203ENST00000409161 TTC31Q49AM3 519 aaPredicted RBP13.95□□□□□ -0.18
SHANK2-203ENST00000409161 CCDC121Q6ZUS5 278 aa13.95□□□□□ -0.18
SHANK2-203ENST00000409161 ALDH1L2Q3SY69 923 aa13.95□□□□□ -0.18
SHANK2-203ENST00000409161 COMMD10Q9Y6G5 202 aa13.95□□□□□ -0.18
SHANK2-203ENST00000409161 EBAG9O00559 213 aa13.94□□□□□ -0.18
SHANK2-203ENST00000409161 CADPSQ9ULU8 1353 aa13.94□□□□□ -0.18
SHANK2-203ENST00000409161 NLRP6P59044 892 aa13.94□□□□□ -0.18
SHANK2-203ENST00000409161 LRP2BPQ9P2M1 347 aa13.94□□□□□ -0.18
SHANK2-203ENST00000409161 MACROD2A1Z1Q3 448 aa13.94□□□□□ -0.18
SHANK2-203ENST00000409161 BMP15O95972 392 aa13.94□□□□□ -0.18
SHANK2-203ENST00000409161 MX1P20591 662 aa13.94□□□□□ -0.18
SHANK2-203ENST00000409161 CUL5Q93034 780 aa13.94□□□□□ -0.18
SHANK2-203ENST00000409161 MKRN1Q9UHC7 482 aaKnown RBP13.94□□□□□ -0.18
SHANK2-203ENST00000409161 DCAF8L1A6NGE4 600 aa13.94□□□□□ -0.18
SHANK2-203ENST00000409161 IQCA1Q86XH1 822 aa13.94□□□□□ -0.18
SHANK2-203ENST00000409161 TCP11L1Q9NUJ3 509 aa13.94□□□□□ -0.18
SHANK2-203ENST00000409161 USH1CQ9Y6N9 552 aa13.93□□□□□ -0.18
SHANK2-203ENST00000409161 TMC6Q7Z403 805 aa13.93□□□□□ -0.18
SHANK2-203ENST00000409161 KIAA1107Q9UPP5 1409 aa13.93□□□□□ -0.18
SHANK2-203ENST00000409161 WDR97A6NE52 1622 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms