RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 PNISRQ8TF01 805 aaKnown RBP23.62■■□□□ 1.37
PDLIM2-206ENST00000409141 LMOD3Q0VAK6 560 aa23.61■■□□□ 1.37
PDLIM2-206ENST00000409141 KLHL34Q8N239 644 aa23.61■■□□□ 1.37
PDLIM2-206ENST00000409141 SYT17Q9BSW7 474 aa23.61■■□□□ 1.37
PDLIM2-206ENST00000409141 CANXP27824 592 aaKnown RBP23.59■■□□□ 1.37
PDLIM2-206ENST00000409141 ZBTB1Q9Y2K1 713 aa23.59■■□□□ 1.37
PDLIM2-206ENST00000409141 COL24A1Q17RW2 1714 aa23.59■■□□□ 1.37
PDLIM2-206ENST00000409141 NLGN1Q8N2Q7 840 aa23.58■■□□□ 1.37
PDLIM2-206ENST00000409141 MRS2Q9HD23 443 aa23.58■■□□□ 1.37
PDLIM2-206ENST00000409141 SOS1Q07889 1333 aaPredicted RBP23.57■■□□□ 1.36
PDLIM2-206ENST00000409141 SNRPA1P09661 255 aaKnown RBP23.57■■□□□ 1.36
PDLIM2-206ENST00000409141 GYS1P13807 737 aa23.56■■□□□ 1.36
PDLIM2-206ENST00000409141 USP16Q9Y5T5 823 aa23.56■■□□□ 1.36
PDLIM2-206ENST00000409141 SRP68Q9UHB9 627 aaKnown RBP23.56■■□□□ 1.36
PDLIM2-206ENST00000409141 PRAMEF22A3QJZ6 481 aa23.55■■□□□ 1.36
PDLIM2-206ENST00000409141 ZPR1O75312 459 aa23.55■■□□□ 1.36
PDLIM2-206ENST00000409141 APAF1O14727 1248 aa23.54■■□□□ 1.36
PDLIM2-206ENST00000409141 A1BGP04217 495 aa23.54■■□□□ 1.36
PDLIM2-206ENST00000409141 TRIM35Q9UPQ4 493 aa23.54■■□□□ 1.36
PDLIM2-206ENST00000409141 USP42Q9H9J4 1324 aaKnown RBP23.53■■□□□ 1.36
PDLIM2-206ENST00000409141 DCAF8L1A6NGE4 600 aa23.53■■□□□ 1.36
PDLIM2-206ENST00000409141 MMP10P09238 476 aa23.53■■□□□ 1.36
PDLIM2-206ENST00000409141 TSPYL4Q9UJ04 414 aa23.53■■□□□ 1.36
PDLIM2-206ENST00000409141 COL15A1P39059 1388 aa23.53■■□□□ 1.36
PDLIM2-206ENST00000409141 EIF5P55010 431 aaKnown RBP23.52■■□□□ 1.36
PDLIM2-206ENST00000409141 ZNF330Q9Y3S2 320 aaPredicted RBP23.52■■□□□ 1.36
PDLIM2-206ENST00000409141 EIF4A1P60842 406 aaKnown RBP23.51■■□□□ 1.35
PDLIM2-206ENST00000409141 USPL1Q5W0Q7 1092 aa23.51■■□□□ 1.35
PDLIM2-206ENST00000409141 A0A087WZG4 1122 aa23.5■■□□□ 1.35
PDLIM2-206ENST00000409141 NPM2Q86SE8 214 aaKnown RBP23.5■■□□□ 1.35
PDLIM2-206ENST00000409141 NARFQ9UHQ1 456 aa23.5■■□□□ 1.35
PDLIM2-206ENST00000409141 IL6STP40189 918 aaPredicted RBP23.49■■□□□ 1.35
PDLIM2-206ENST00000409141 FKBP8Q14318 412 aa23.49■■□□□ 1.35
PDLIM2-206ENST00000409141 BABAM1Q9NWV8 329 aa23.49■■□□□ 1.35
PDLIM2-206ENST00000409141 C4AP0C0L4 1744 aa23.49■■□□□ 1.35
PDLIM2-206ENST00000409141 LAS1LQ9Y4W2 734 aaKnown RBP23.49■■□□□ 1.35
PDLIM2-206ENST00000409141 CD2APQ9Y5K6 639 aa23.49■■□□□ 1.35
PDLIM2-206ENST00000409141 PARP3Q9Y6F1 533 aa23.49■■□□□ 1.35
PDLIM2-206ENST00000409141 GIGYF1O75420 1035 aaPredicted RBP23.48■■□□□ 1.35
PDLIM2-206ENST00000409141 NLGN2Q8NFZ4 835 aa23.48■■□□□ 1.35
PDLIM2-206ENST00000409141 PIP4K2AP48426 406 aaPredicted RBP23.47■■□□□ 1.35
PDLIM2-206ENST00000409141 KDM3BQ7LBC6 1761 aa23.46■■□□□ 1.35
PDLIM2-206ENST00000409141 TBC1D2BQ9UPU7 963 aa23.46■■□□□ 1.35
PDLIM2-206ENST00000409141 CHL1O00533 1208 aa23.45■■□□□ 1.34
PDLIM2-206ENST00000409141 BCL2L12Q9HB09 334 aa23.43■■□□□ 1.34
PDLIM2-206ENST00000409141 NBPF26B4DH59 902 aa23.43■■□□□ 1.34
PDLIM2-206ENST00000409141 TM4SF1P30408 202 aa23.43■■□□□ 1.34
PDLIM2-206ENST00000409141 NBPF10Q6P3W6 841 aaKnown RBP23.43■■□□□ 1.34
PDLIM2-206ENST00000409141 NBPF15Q8N660 670 aa23.43■■□□□ 1.34
PDLIM2-206ENST00000409141 SENP3-EIF4A1A0A087X0R7 540 aa23.42■■□□□ 1.34
PDLIM2-206ENST00000409141 DZIP3Q86Y13 1208 aaKnown RBP23.42■■□□□ 1.34
PDLIM2-206ENST00000409141 CALD1Q05682 793 aaKnown RBP23.41■■□□□ 1.34
PDLIM2-206ENST00000409141 DDR1Q08345 913 aa23.41■■□□□ 1.34
PDLIM2-206ENST00000409141 GPR162Q16538 588 aa23.41■■□□□ 1.34
PDLIM2-206ENST00000409141 PELP1Q8IZL8 1130 aaKnown RBP23.41■■□□□ 1.34
PDLIM2-206ENST00000409141 FAM9BQ8IZU0 186 aa23.41■■□□□ 1.34
PDLIM2-206ENST00000409141 CFAP44Q96MT7 982 aa23.41■■□□□ 1.34
PDLIM2-206ENST00000409141 NFIXQ14938 502 aa23.4■■□□□ 1.34
PDLIM2-206ENST00000409141 POLRMTO00411 1230 aaKnown RBP23.39■■□□□ 1.34
PDLIM2-206ENST00000409141 BICDL1Q6ZP65 573 aa23.39■■□□□ 1.34
PDLIM2-206ENST00000409141 CAMTA2O94983 1202 aa23.38■■□□□ 1.33
PDLIM2-206ENST00000409141 EIF2S2P20042 333 aaKnown RBP23.38■■□□□ 1.33
PDLIM2-206ENST00000409141 NGEFQ8N5V2 710 aa23.37■■□□□ 1.33
PDLIM2-206ENST00000409141 GNAI1P63096 354 aa23.36■■□□□ 1.33
PDLIM2-206ENST00000409141 IFT57Q9NWB7 429 aa23.36■■□□□ 1.33
PDLIM2-206ENST00000409141 ZNF853P0CG23 659 aa23.36■■□□□ 1.33
PDLIM2-206ENST00000409141 MYL6BP14649 208 aa23.36■■□□□ 1.33
PDLIM2-206ENST00000409141 KRT24Q2M2I5 525 aa23.36■■□□□ 1.33
PDLIM2-206ENST00000409141 TBC1D9BQ66K14 1250 aa23.36■■□□□ 1.33
PDLIM2-206ENST00000409141 MBIPQ9NS73 344 aa23.36■■□□□ 1.33
PDLIM2-206ENST00000409141 SERPINB2P05120 415 aa23.35■■□□□ 1.33
PDLIM2-206ENST00000409141 TGFB2P61812 414 aa23.35■■□□□ 1.33
PDLIM2-206ENST00000409141 CCDC27Q2M243 656 aa23.35■■□□□ 1.33
PDLIM2-206ENST00000409141 LAMB4A4D0S4 1761 aa23.35■■□□□ 1.33
PDLIM2-206ENST00000409141 C10orf71Q711Q0 1435 aa23.34■■□□□ 1.33
PDLIM2-206ENST00000409141 ERBB4Q15303 1308 aa23.34■■□□□ 1.33
PDLIM2-206ENST00000409141 CLEC4GQ6UXB4 293 aa23.33■■□□□ 1.33
PDLIM2-206ENST00000409141 WWC1Q8IX03 1113 aa23.33■■□□□ 1.33
PDLIM2-206ENST00000409141 NECTIN2Q92692 538 aa23.33■■□□□ 1.33
PDLIM2-206ENST00000409141 ZNF652Q9Y2D9 606 aa23.33■■□□□ 1.33
PDLIM2-206ENST00000409141 A0A0G2JLW4 131 aa23.32■■□□□ 1.32
PDLIM2-206ENST00000409141 NCBP3Q53F19 620 aaKnown RBP23.32■■□□□ 1.32
PDLIM2-206ENST00000409141 SETDB2Q96T68 719 aa23.32■■□□□ 1.32
PDLIM2-206ENST00000409141 SALL2Q9Y467 1007 aaPredicted RBP23.32■■□□□ 1.32
PDLIM2-206ENST00000409141 WWC3Q9ULE0 1092 aa23.31■■□□□ 1.32
PDLIM2-206ENST00000409141 YBX3P16989 372 aaKnown RBP eCLIP23.3■■□□□ 1.32
PDLIM2-206ENST00000409141 SCN7AQ01118 1682 aa23.3■■□□□ 1.32
PDLIM2-206ENST00000409141 DPEP1P16444 411 aa23.3■■□□□ 1.32
PDLIM2-206ENST00000409141 PDIA6Q15084 440 aa23.3■■□□□ 1.32
PDLIM2-206ENST00000409141 DUSP27Q5VZP5 1158 aa23.3■■□□□ 1.32
PDLIM2-206ENST00000409141 KIF6Q6ZMV9 814 aa23.3■■□□□ 1.32
PDLIM2-206ENST00000409141 RGL2O15211 777 aa23.29■■□□□ 1.32
PDLIM2-206ENST00000409141 GRIN3BO60391 1043 aa23.29■■□□□ 1.32
PDLIM2-206ENST00000409141 HOXB7P09629 217 aa23.29■■□□□ 1.32
PDLIM2-206ENST00000409141 TTLL7Q6ZT98 887 aa23.29■■□□□ 1.32
PDLIM2-206ENST00000409141 CARMIL3Q8ND23 1372 aa23.28■■□□□ 1.32
PDLIM2-206ENST00000409141 PXDNLA1KZ92 1463 aa23.28■■□□□ 1.32
PDLIM2-206ENST00000409141 KIF13BQ9NQT8 1826 aa23.28■■□□□ 1.32
PDLIM2-206ENST00000409141 ANXA1P04083 346 aa23.28■■□□□ 1.32
PDLIM2-206ENST00000409141 HLFQ16534 295 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms