RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 MTFR1LQ9H019 292 aa13.48□□□□□ -0.25
TSPAN9-202ENST00000407263 CCDC87Q9NVE4 849 aa13.48□□□□□ -0.25
TSPAN9-202ENST00000407263 ZBTB1Q9Y2K1 713 aa13.48□□□□□ -0.25
TSPAN9-202ENST00000407263 RTCBQ9Y3I0 505 aaKnown RBP13.48□□□□□ -0.25
TSPAN9-202ENST00000407263 HMGB2P26583 209 aaKnown RBP13.47□□□□□ -0.25
TSPAN9-202ENST00000407263 ZNF330Q9Y3S2 320 aaPredicted RBP13.47□□□□□ -0.25
TSPAN9-202ENST00000407263 NUP98P52948 1817 aa13.47□□□□□ -0.25
TSPAN9-202ENST00000407263 ANKRD36CQ5JPF3 1778 aa13.47□□□□□ -0.25
TSPAN9-202ENST00000407263 KIF13BQ9NQT8 1826 aa13.46□□□□□ -0.25
TSPAN9-202ENST00000407263 SOS1Q07889 1333 aaPredicted RBP13.46□□□□□ -0.25
TSPAN9-202ENST00000407263 CANXP27824 592 aaKnown RBP13.46□□□□□ -0.25
TSPAN9-202ENST00000407263 PIP4K2AP48426 406 aaPredicted RBP13.46□□□□□ -0.25
TSPAN9-202ENST00000407263 RC3H1Q5TC82 1133 aaKnown RBP13.46□□□□□ -0.25
TSPAN9-202ENST00000407263 INTS5Q6P9B9 1019 aaKnown RBP13.46□□□□□ -0.25
TSPAN9-202ENST00000407263 PPP1R1BQ9UD71 204 aaPredicted RBP13.46□□□□□ -0.25
TSPAN9-202ENST00000407263 SALL2Q9Y467 1007 aaPredicted RBP13.46□□□□□ -0.25
TSPAN9-202ENST00000407263 RPS6KA4O75676 772 aa13.45□□□□□ -0.26
TSPAN9-202ENST00000407263 PTGER2P43116 358 aa13.45□□□□□ -0.26
TSPAN9-202ENST00000407263 FLAD1Q8NFF5 587 aa13.45□□□□□ -0.26
TSPAN9-202ENST00000407263 N4BP2Q86UW6 1770 aaPredicted RBP13.45□□□□□ -0.26
TSPAN9-202ENST00000407263 KIAA1551Q9HCM1 1747 aa13.44□□□□□ -0.26
TSPAN9-202ENST00000407263 STARD3NLO95772 234 aa13.44□□□□□ -0.26
TSPAN9-202ENST00000407263 SNRPA1P09661 255 aaKnown RBP13.44□□□□□ -0.26
TSPAN9-202ENST00000407263 EIF4A1P60842 406 aaKnown RBP13.44□□□□□ -0.26
TSPAN9-202ENST00000407263 MIER1Q8N108 512 aa13.44□□□□□ -0.26
TSPAN9-202ENST00000407263 KLHL34Q8N239 644 aa13.44□□□□□ -0.26
TSPAN9-202ENST00000407263 SLC16A10Q8TF71 515 aa13.44□□□□□ -0.26
TSPAN9-202ENST00000407263 SRP68Q9UHB9 627 aaKnown RBP13.44□□□□□ -0.26
TSPAN9-202ENST00000407263 CACNA1SQ13698 1873 aa13.44□□□□□ -0.26
TSPAN9-202ENST00000407263 ARFGEF2Q9Y6D5 1785 aa13.43□□□□□ -0.26
TSPAN9-202ENST00000407263 CCER2I3L3R5 266 aa13.43□□□□□ -0.26
TSPAN9-202ENST00000407263 A1BGP04217 495 aa13.43□□□□□ -0.26
TSPAN9-202ENST00000407263 ADRA2BP18089 450 aa13.43□□□□□ -0.26
TSPAN9-202ENST00000407263 RFC4P35249 363 aa13.43□□□□□ -0.26
TSPAN9-202ENST00000407263 KRT24Q2M2I5 525 aa13.43□□□□□ -0.26
TSPAN9-202ENST00000407263 TRAPPC3LQ5T215 181 aa13.43□□□□□ -0.26
TSPAN9-202ENST00000407263 ARHGEF1Q92888 912 aaKnown RBP13.43□□□□□ -0.26
TSPAN9-202ENST00000407263 SGIP1Q9BQI5 828 aa13.43□□□□□ -0.26
TSPAN9-202ENST00000407263 USP16Q9Y5T5 823 aa13.43□□□□□ -0.26
TSPAN9-202ENST00000407263 USP42Q9H9J4 1324 aaKnown RBP13.42□□□□□ -0.26
TSPAN9-202ENST00000407263 NRXN2Q9P2S2 1712 aa13.42□□□□□ -0.26
TSPAN9-202ENST00000407263 POLD1P28340 1107 aa13.42□□□□□ -0.26
TSPAN9-202ENST00000407263 TEX13AQ9BXU3 409 aaPredicted RBP13.42□□□□□ -0.26
TSPAN9-202ENST00000407263 ANKRD31Q8N7Z5 1873 aa13.42□□□□□ -0.26
TSPAN9-202ENST00000407263 GIGYF1O75420 1035 aaPredicted RBP13.41□□□□□ -0.26
TSPAN9-202ENST00000407263 MBIPQ9NS73 344 aa13.41□□□□□ -0.26
TSPAN9-202ENST00000407263 BRCA1P38398 1863 aaKnown RBP13.41□□□□□ -0.26
TSPAN9-202ENST00000407263 DLEC1Q9Y238 1755 aa13.4□□□□□ -0.26
TSPAN9-202ENST00000407263 COL11A2P13942 1736 aaPredicted RBP13.4□□□□□ -0.26
TSPAN9-202ENST00000407263 WWC1Q8IX03 1113 aa13.4□□□□□ -0.26
TSPAN9-202ENST00000407263 NECTIN2Q92692 538 aa13.4□□□□□ -0.26
TSPAN9-202ENST00000407263 CFAP44Q96MT7 982 aa13.4□□□□□ -0.26
TSPAN9-202ENST00000407263 ARXQ96QS3 562 aa13.4□□□□□ -0.26
TSPAN9-202ENST00000407263 IFT57Q9NWB7 429 aa13.4□□□□□ -0.26
TSPAN9-202ENST00000407263 CHL1O00533 1208 aa13.39□□□□□ -0.27
TSPAN9-202ENST00000407263 GYS1P13807 737 aa13.39□□□□□ -0.27
TSPAN9-202ENST00000407263 GNAI1P63096 354 aa13.39□□□□□ -0.27
TSPAN9-202ENST00000407263 CALD1Q05682 793 aaKnown RBP13.39□□□□□ -0.27
TSPAN9-202ENST00000407263 USPL1Q5W0Q7 1092 aa13.39□□□□□ -0.27
TSPAN9-202ENST00000407263 TSR2Q969E8 191 aaKnown RBP13.39□□□□□ -0.27
TSPAN9-202ENST00000407263 BABAM1Q9NWV8 329 aa13.39□□□□□ -0.27
TSPAN9-202ENST00000407263 CACNA1FO60840 1977 aa13.38□□□□□ -0.27
TSPAN9-202ENST00000407263 NBPF26B4DH59 902 aa13.38□□□□□ -0.27
TSPAN9-202ENST00000407263 ZPR1O75312 459 aa13.38□□□□□ -0.27
TSPAN9-202ENST00000407263 MMP10P09238 476 aa13.38□□□□□ -0.27
TSPAN9-202ENST00000407263 EIF2S2P20042 333 aaKnown RBP13.38□□□□□ -0.27
TSPAN9-202ENST00000407263 IL6STP40189 918 aaPredicted RBP13.38□□□□□ -0.27
TSPAN9-202ENST00000407263 EIF5P55010 431 aaKnown RBP13.38□□□□□ -0.27
TSPAN9-202ENST00000407263 FKBP8Q14318 412 aa13.38□□□□□ -0.27
TSPAN9-202ENST00000407263 CCDC27Q2M243 656 aa13.38□□□□□ -0.27
TSPAN9-202ENST00000407263 NBPF10Q6P3W6 841 aaKnown RBP13.38□□□□□ -0.27
TSPAN9-202ENST00000407263 NBPF15Q8N660 670 aa13.38□□□□□ -0.27
TSPAN9-202ENST00000407263 FHDC1Q9C0D6 1143 aaPredicted RBP13.38□□□□□ -0.27
TSPAN9-202ENST00000407263 TBC1D2BQ9UPU7 963 aa13.38□□□□□ -0.27
TSPAN9-202ENST00000407263 SRCAPQ6ZRS2 3230 aa13.38□□□□□ -0.27
TSPAN9-202ENST00000407263 ANXA1P04083 346 aa13.37□□□□□ -0.27
TSPAN9-202ENST00000407263 ZNF853P0CG23 659 aa13.37□□□□□ -0.27
TSPAN9-202ENST00000407263 MYL6BP14649 208 aa13.37□□□□□ -0.27
TSPAN9-202ENST00000407263 NPM2Q86SE8 214 aaKnown RBP13.37□□□□□ -0.27
TSPAN9-202ENST00000407263 NGEFQ8N5V2 710 aa13.37□□□□□ -0.27
TSPAN9-202ENST00000407263 NARFQ9UHQ1 456 aa13.37□□□□□ -0.27
TSPAN9-202ENST00000407263 A0A087WZG4 1122 aa13.36□□□□□ -0.27
TSPAN9-202ENST00000407263 DZIP3Q86Y13 1208 aaKnown RBP13.36□□□□□ -0.27
TSPAN9-202ENST00000407263 TNRC6CQ9HCJ0 1690 aaKnown RBP13.36□□□□□ -0.27
TSPAN9-202ENST00000407263 C10orf71Q711Q0 1435 aa13.36□□□□□ -0.27
TSPAN9-202ENST00000407263 FANCIQ9NVI1 1328 aa13.36□□□□□ -0.27
TSPAN9-202ENST00000407263 ELL2O00472 640 aaPredicted RBP13.35□□□□□ -0.27
TSPAN9-202ENST00000407263 DDR1Q08345 913 aa13.35□□□□□ -0.27
TSPAN9-202ENST00000407263 PROSER3Q2NL68 480 aa13.35□□□□□ -0.27
TSPAN9-202ENST00000407263 BICDL1Q6ZP65 573 aa13.35□□□□□ -0.27
TSPAN9-202ENST00000407263 BCL2L12Q9HB09 334 aa13.35□□□□□ -0.27
TSPAN9-202ENST00000407263 LAMB2P55268 1798 aa13.35□□□□□ -0.27
TSPAN9-202ENST00000407263 HDGFL1Q5TGJ6 251 aa13.34□□□□□ -0.27
TSPAN9-202ENST00000407263 DUSP27Q5VZP5 1158 aa13.34□□□□□ -0.27
TSPAN9-202ENST00000407263 NLGN1Q8N2Q7 840 aa13.34□□□□□ -0.27
TSPAN9-202ENST00000407263 NLGN2Q8NFZ4 835 aa13.34□□□□□ -0.27
TSPAN9-202ENST00000407263 ERBB4Q15303 1308 aa13.34□□□□□ -0.27
TSPAN9-202ENST00000407263 CAMTA2O94983 1202 aa13.33□□□□□ -0.28
TSPAN9-202ENST00000407263 C8orf58Q8NAV2 365 aa13.33□□□□□ -0.28
TSPAN9-202ENST00000407263 CHPF2Q9P2E5 772 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms