RNA–Protein interactions for RNA: ENST00000402580.7

XRCC6-203, Transcript of X-ray repair cross complementing 6, humanhuman

TSL 2 BASIC

Gene XRCC6, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-203ENST00000402580 ANP32AP39687 249 aaKnown RBP13.37□□□□□ -0.27
XRCC6-203ENST00000402580 INTS5Q6P9B9 1019 aaKnown RBP13.37□□□□□ -0.27
XRCC6-203ENST00000402580 ZNF790Q6PG37 636 aa13.37□□□□□ -0.27
XRCC6-203ENST00000402580 NLGN1Q8N2Q7 840 aa13.37□□□□□ -0.27
XRCC6-203ENST00000402580 RTF1Q92541 710 aaKnown RBP13.37□□□□□ -0.27
XRCC6-203ENST00000402580 HEG1Q9ULI3 1381 aa13.37□□□□□ -0.27
XRCC6-203ENST00000402580 TTC5Q8N0Z6 440 aa13.37□□□□□ -0.27
XRCC6-203ENST00000402580 CCDC87Q9NVE4 849 aa13.37□□□□□ -0.27
XRCC6-203ENST00000402580 SLC39A6Q13433 755 aa13.36□□□□□ -0.27
XRCC6-203ENST00000402580 DNAJC10Q8IXB1 793 aa13.36□□□□□ -0.27
XRCC6-203ENST00000402580 ARHGEF1Q92888 912 aaKnown RBP13.36□□□□□ -0.27
XRCC6-203ENST00000402580 PHF14O94880 888 aa13.35□□□□□ -0.27
XRCC6-203ENST00000402580 NFE2L2Q16236 605 aa13.35□□□□□ -0.27
XRCC6-203ENST00000402580 FMNL2Q96PY5 1086 aa13.35□□□□□ -0.27
XRCC6-203ENST00000402580 SOS1Q07889 1333 aaPredicted RBP13.35□□□□□ -0.27
XRCC6-203ENST00000402580 KDM3BQ7LBC6 1761 aa13.35□□□□□ -0.27
XRCC6-203ENST00000402580 RRP1P56182 461 aaKnown RBP13.35□□□□□ -0.27
XRCC6-203ENST00000402580 STARD3NLO95772 234 aa13.34□□□□□ -0.27
XRCC6-203ENST00000402580 RFC4P35249 363 aa13.34□□□□□ -0.27
XRCC6-203ENST00000402580 IPO9Q96P70 1041 aaKnown RBP13.34□□□□□ -0.27
XRCC6-203ENST00000402580 BTBD11A6QL63 1104 aa13.34□□□□□ -0.27
XRCC6-203ENST00000402580 ZNF496Q96IT1 587 aaPredicted RBP13.34□□□□□ -0.27
XRCC6-203ENST00000402580 USP42Q9H9J4 1324 aaKnown RBP13.34□□□□□ -0.27
XRCC6-203ENST00000402580 GYS1P13807 737 aa13.33□□□□□ -0.28
XRCC6-203ENST00000402580 TAF7Q15545 349 aaPredicted RBP13.33□□□□□ -0.28
XRCC6-203ENST00000402580 MSL1Q68DK7 614 aa13.33□□□□□ -0.28
XRCC6-203ENST00000402580 BABAM1Q9NWV8 329 aa13.33□□□□□ -0.28
XRCC6-203ENST00000402580 MAPK8IP3Q9UPT6 1336 aa13.33□□□□□ -0.28
XRCC6-203ENST00000402580 LAMB4A4D0S4 1761 aa13.32□□□□□ -0.28
XRCC6-203ENST00000402580 CHD4Q14839 1912 aa13.32□□□□□ -0.28
XRCC6-203ENST00000402580 A0A087WZG4 1122 aa13.32□□□□□ -0.28
XRCC6-203ENST00000402580 RCAN3Q9UKA8 241 aa13.32□□□□□ -0.28
XRCC6-203ENST00000402580 KIAA1551Q9HCM1 1747 aa13.31□□□□□ -0.28
XRCC6-203ENST00000402580 COL15A1P39059 1388 aa13.31□□□□□ -0.28
XRCC6-203ENST00000402580 RGL2O15211 777 aa13.31□□□□□ -0.28
XRCC6-203ENST00000402580 EIF5P55010 431 aaKnown RBP13.31□□□□□ -0.28
XRCC6-203ENST00000402580 LMOD3Q0VAK6 560 aa13.31□□□□□ -0.28
XRCC6-203ENST00000402580 SMIM5Q71RC9 77 aa13.31□□□□□ -0.28
XRCC6-203ENST00000402580 NARFQ9UHQ1 456 aa13.31□□□□□ -0.28
XRCC6-203ENST00000402580 NRXN2Q9P2S2 1712 aa13.31□□□□□ -0.28
XRCC6-203ENST00000402580 C10orf71Q711Q0 1435 aa13.31□□□□□ -0.28
XRCC6-203ENST00000402580 SCN7AQ01118 1682 aa13.3□□□□□ -0.28
XRCC6-203ENST00000402580 SENP3-EIF4A1A0A087X0R7 540 aa13.3□□□□□ -0.28
XRCC6-203ENST00000402580 DEKP35659 375 aaKnown RBP13.3□□□□□ -0.28
XRCC6-203ENST00000402580 MCM10Q7L590 875 aa13.3□□□□□ -0.28
XRCC6-203ENST00000402580 MMP10P09238 476 aa13.3□□□□□ -0.28
XRCC6-203ENST00000402580 SNRPA1P09661 255 aaKnown RBP13.3□□□□□ -0.28
XRCC6-203ENST00000402580 IL6STP40189 918 aaPredicted RBP13.3□□□□□ -0.28
XRCC6-203ENST00000402580 ZBTB1Q9Y2K1 713 aa13.3□□□□□ -0.28
XRCC6-203ENST00000402580 TCERG1O14776 1098 aaKnown RBP13.29□□□□□ -0.28
XRCC6-203ENST00000402580 TM4SF1P30408 202 aa13.29□□□□□ -0.28
XRCC6-203ENST00000402580 TGFB2P61812 414 aa13.29□□□□□ -0.28
XRCC6-203ENST00000402580 RUNDC1Q96C34 613 aa13.29□□□□□ -0.28
XRCC6-203ENST00000402580 ZBTB47Q9UFB7 747 aaPredicted RBP13.29□□□□□ -0.28
XRCC6-203ENST00000402580 BCORQ6W2J9 1755 aa13.29□□□□□ -0.28
XRCC6-203ENST00000402580 NLGN2Q8NFZ4 835 aa13.29□□□□□ -0.28
XRCC6-203ENST00000402580 ZPR1O75312 459 aa13.28□□□□□ -0.28
XRCC6-203ENST00000402580 TMPOP42166 694 aaKnown RBP13.28□□□□□ -0.28
XRCC6-203ENST00000402580 WDR43Q15061 677 aaKnown RBP eCLIP13.28□□□□□ -0.281e-7■■□□□ 13.3
XRCC6-203ENST00000402580 EXOC6Q8TAG9 804 aa13.28□□□□□ -0.28
XRCC6-203ENST00000402580 PARP3Q9Y6F1 533 aa13.28□□□□□ -0.28
XRCC6-203ENST00000402580 KCNQ3O43525 872 aa13.27□□□□□ -0.28
XRCC6-203ENST00000402580 GRIN3BO60391 1043 aa13.27□□□□□ -0.28
XRCC6-203ENST00000402580 DCTN1Q14203 1278 aa13.27□□□□□ -0.28
XRCC6-203ENST00000402580 BRCA1P38398 1863 aaKnown RBP13.26□□□□□ -0.29
XRCC6-203ENST00000402580 RIPK4P57078 832 aa13.26□□□□□ -0.29
XRCC6-203ENST00000402580 SRP68Q9UHB9 627 aaKnown RBP13.26□□□□□ -0.29
XRCC6-203ENST00000402580 AFDNP55196 1824 aaKnown RBP13.26□□□□□ -0.29
XRCC6-203ENST00000402580 NBR1Q14596 966 aa13.25□□□□□ -0.29
XRCC6-203ENST00000402580 GPR162Q16538 588 aa13.25□□□□□ -0.29
XRCC6-203ENST00000402580 USPL1Q5W0Q7 1092 aa13.25□□□□□ -0.29
XRCC6-203ENST00000402580 PXDNLA1KZ92 1463 aa13.25□□□□□ -0.29
XRCC6-203ENST00000402580 POLRMTO00411 1230 aaKnown RBP13.25□□□□□ -0.29
XRCC6-203ENST00000402580 MS4A1P11836 297 aa13.25□□□□□ -0.29
XRCC6-203ENST00000402580 EIF4A1P60842 406 aaKnown RBP13.25□□□□□ -0.29
XRCC6-203ENST00000402580 KLHL34Q8N239 644 aa13.25□□□□□ -0.29
XRCC6-203ENST00000402580 BCL2L12Q9HB09 334 aa13.25□□□□□ -0.29
XRCC6-203ENST00000402580 ADAMTS8Q9UP79 889 aa13.25□□□□□ -0.29
XRCC6-203ENST00000402580 USP16Q9Y5T5 823 aa13.25□□□□□ -0.29
XRCC6-203ENST00000402580 ERBB4Q15303 1308 aa13.24□□□□□ -0.29
XRCC6-203ENST00000402580 CANXP27824 592 aaKnown RBP13.24□□□□□ -0.29
XRCC6-203ENST00000402580 NCBP3Q53F19 620 aaKnown RBP13.24□□□□□ -0.29
XRCC6-203ENST00000402580 GIGYF1O75420 1035 aaPredicted RBP13.23□□□□□ -0.29
XRCC6-203ENST00000402580 DDR1Q08345 913 aa13.23□□□□□ -0.29
XRCC6-203ENST00000402580 DLEC1Q9Y238 1755 aa13.23□□□□□ -0.29
XRCC6-203ENST00000402580 ARFGEF1Q9Y6D6 1849 aa13.23□□□□□ -0.29
XRCC6-203ENST00000402580 N4BP2Q86UW6 1770 aaPredicted RBP13.23□□□□□ -0.29
XRCC6-203ENST00000402580 A1BGP04217 495 aa13.23□□□□□ -0.29
XRCC6-203ENST00000402580 YY1P25490 414 aa13.23□□□□□ -0.29
XRCC6-203ENST00000402580 CLEC4GQ6UXB4 293 aa13.23□□□□□ -0.29
XRCC6-203ENST00000402580 PDZRN3Q9UPQ7 1066 aa13.23□□□□□ -0.29
XRCC6-203ENST00000402580 SALL2Q9Y467 1007 aaPredicted RBP13.23□□□□□ -0.29
XRCC6-203ENST00000402580 NFIXQ14938 502 aa13.22□□□□□ -0.29
XRCC6-203ENST00000402580 RTL5Q5HYW3 569 aaPredicted RBP13.22□□□□□ -0.29
XRCC6-203ENST00000402580 CAMTA2O94983 1202 aa13.22□□□□□ -0.29
XRCC6-203ENST00000402580 YBX3P16989 372 aaKnown RBP eCLIP13.22□□□□□ -0.292e-7■□□□□ 9.9
XRCC6-203ENST00000402580 NPM2Q86SE8 214 aaKnown RBP13.22□□□□□ -0.29
XRCC6-203ENST00000402580 TRIM35Q9UPQ4 493 aa13.22□□□□□ -0.29
XRCC6-203ENST00000402580 SRCAPQ6ZRS2 3230 aa13.21□□□□□ -0.29
XRCC6-203ENST00000402580 PDE4AP27815 886 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms