RNA–Protein interactions for RNA: ENST00000401498.6

PKDCC-202, Transcript of protein kinase domain containing, cytoplasmic, humanhuman

TSL 5

Gene PKDCC, Length 1,550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKDCC-202ENST00000401498 GIGYF1O75420 1035 aaPredicted RBP39.21■■■■□ 3.87
PKDCC-202ENST00000401498 INTS5Q6P9B9 1019 aaKnown RBP39.21■■■■□ 3.87
PKDCC-202ENST00000401498 PDGFDQ9GZP0 370 aaPredicted RBP39.21■■■■□ 3.87
PKDCC-202ENST00000401498 PNPLA7Q6ZV29 1317 aa39.2■■■■□ 3.87
PKDCC-202ENST00000401498 STARD3NLO95772 234 aa39.2■■■■□ 3.87
PKDCC-202ENST00000401498 SMIM5Q71RC9 77 aa39.2■■■■□ 3.87
PKDCC-202ENST00000401498 CCDC87Q9NVE4 849 aa39.18■■■■□ 3.86
PKDCC-202ENST00000401498 CASZ1Q86V15 1759 aa39.17■■■■□ 3.86
PKDCC-202ENST00000401498 KRT24Q2M2I5 525 aa39.16■■■■□ 3.86
PKDCC-202ENST00000401498 LAMB4A4D0S4 1761 aa39.16■■■■□ 3.86
PKDCC-202ENST00000401498 RPS6KA4O75676 772 aa39.14■■■■□ 3.86
PKDCC-202ENST00000401498 TSR2Q969E8 191 aaKnown RBP39.14■■■■□ 3.86
PKDCC-202ENST00000401498 SPINK5Q9NQ38 1064 aaPredicted RBP39.14■■■■□ 3.86
PKDCC-202ENST00000401498 ZBTB1Q9Y2K1 713 aa39.14■■■■□ 3.86
PKDCC-202ENST00000401498 RTCBQ9Y3I0 505 aaKnown RBP39.14■■■■□ 3.86
PKDCC-202ENST00000401498 PHF14O94880 888 aa39.13■■■■□ 3.85
PKDCC-202ENST00000401498 COL23A1Q86Y22 540 aaPredicted RBP39.13■■■■□ 3.85
PKDCC-202ENST00000401498 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP39.12■■■■□ 3.85
PKDCC-202ENST00000401498 SSFA2P28290 1259 aa39.12■■■■□ 3.85
PKDCC-202ENST00000401498 A1BGP04217 495 aa39.12■■■■□ 3.85
PKDCC-202ENST00000401498 FLAD1Q8NFF5 587 aa39.1■■■■□ 3.85
PKDCC-202ENST00000401498 CANXP27824 592 aaKnown RBP39.08■■■■□ 3.85
PKDCC-202ENST00000401498 SOS1Q07889 1333 aaPredicted RBP39.07■■■■□ 3.85
PKDCC-202ENST00000401498 TRAPPC3LQ5T215 181 aa39.06■■■■□ 3.84
PKDCC-202ENST00000401498 FANCIQ9NVI1 1328 aa39.06■■■■□ 3.84
PKDCC-202ENST00000401498 HNRNPUQ00839 825 aaKnown RBP eCLIP39.05■■■■□ 3.84
PKDCC-202ENST00000401498 ARHGEF1Q92888 912 aaKnown RBP39.05■■■■□ 3.84
PKDCC-202ENST00000401498 MSH5O43196 834 aa39.04■■■■□ 3.84
PKDCC-202ENST00000401498 ADRA2BP18089 450 aa39.04■■■■□ 3.84
PKDCC-202ENST00000401498 PIP4K2AP48426 406 aaPredicted RBP39.04■■■■□ 3.84
PKDCC-202ENST00000401498 GOLGA2Q08379 1002 aa39.04■■■■□ 3.84
PKDCC-202ENST00000401498 C8orf58Q8NAV2 365 aa39.04■■■■□ 3.84
PKDCC-202ENST00000401498 DUSP27Q5VZP5 1158 aa39.04■■■■□ 3.84
PKDCC-202ENST00000401498 C4AP0C0L4 1744 aa39.03■■■■□ 3.84
PKDCC-202ENST00000401498 NBPF26B4DH59 902 aa39.03■■■■□ 3.84
PKDCC-202ENST00000401498 NBPF10Q6P3W6 841 aaKnown RBP39.03■■■■□ 3.84
PKDCC-202ENST00000401498 NBPF15Q8N660 670 aa39.03■■■■□ 3.84
PKDCC-202ENST00000401498 EIF2S2P20042 333 aaKnown RBP39.02■■■■□ 3.84
PKDCC-202ENST00000401498 EIF5P55010 431 aaKnown RBP39.02■■■■□ 3.84
PKDCC-202ENST00000401498 ELL2O00472 640 aaPredicted RBP39.01■■■■□ 3.84
PKDCC-202ENST00000401498 HOXB7P09629 217 aa39.01■■■■□ 3.84
PKDCC-202ENST00000401498 ZBTB7AO95365 584 aa39■■■■□ 3.83
PKDCC-202ENST00000401498 IL6STP40189 918 aaPredicted RBP39■■■■□ 3.83
PKDCC-202ENST00000401498 MYH16Q9H6N6 1097 aa39■■■■□ 3.83
PKDCC-202ENST00000401498 COL15A1P39059 1388 aa39■■■■□ 3.83
PKDCC-202ENST00000401498 TSPYL6Q8N831 410 aa38.99■■■■□ 3.83
PKDCC-202ENST00000401498 SLC16A10Q8TF71 515 aa38.99■■■■□ 3.83
PKDCC-202ENST00000401498 RFC4P35249 363 aa38.97■■■■□ 3.83
PKDCC-202ENST00000401498 NECTIN2Q92692 538 aa38.97■■■■□ 3.83
PKDCC-202ENST00000401498 CDCA7LQ96GN5 454 aa38.97■■■■□ 3.83
PKDCC-202ENST00000401498 SLFN5Q08AF3 891 aa38.96■■■■□ 3.83
PKDCC-202ENST00000401498 ZNF330Q9Y3S2 320 aaPredicted RBP38.96■■■■□ 3.83
PKDCC-202ENST00000401498 E9PSI1 815 aa38.95■■■■□ 3.83
PKDCC-202ENST00000401498 MTFR1LQ9H019 292 aa38.95■■■■□ 3.83
PKDCC-202ENST00000401498 SRCAPQ6ZRS2 3230 aa38.94■■■■□ 3.82
PKDCC-202ENST00000401498 ERBB4Q15303 1308 aa38.94■■■■□ 3.82
PKDCC-202ENST00000401498 PDIA6Q15084 440 aa38.94■■■■□ 3.82
PKDCC-202ENST00000401498 HDGFL1Q5TGJ6 251 aa38.94■■■■□ 3.82
PKDCC-202ENST00000401498 ATF5Q9Y2D1 282 aaPredicted RBP38.94■■■■□ 3.82
PKDCC-202ENST00000401498 EXOSC9Q06265 439 aaKnown RBP38.93■■■■□ 3.82
PKDCC-202ENST00000401498 SRP68Q9UHB9 627 aaKnown RBP38.92■■■■□ 3.82
PKDCC-202ENST00000401498 USP42Q9H9J4 1324 aaKnown RBP38.91■■■■□ 3.82
PKDCC-202ENST00000401498 MYL6BP14649 208 aa38.91■■■■□ 3.82
PKDCC-202ENST00000401498 TWISTNBQ3B726 338 aaPredicted RBP38.91■■■■□ 3.82
PKDCC-202ENST00000401498 COL24A1Q17RW2 1714 aa38.9■■■■□ 3.82
PKDCC-202ENST00000401498 A0A087WZG4 1122 aa38.9■■■■□ 3.82
PKDCC-202ENST00000401498 PROSER3Q2NL68 480 aa38.9■■■■□ 3.82
PKDCC-202ENST00000401498 TRMT2AQ8IZ69 625 aaKnown RBP38.89■■■■□ 3.82
PKDCC-202ENST00000401498 NARFQ9UHQ1 456 aa38.89■■■■□ 3.82
PKDCC-202ENST00000401498 ANXA1P04083 346 aa38.88■■■■□ 3.81
PKDCC-202ENST00000401498 MSL1Q68DK7 614 aa38.88■■■■□ 3.81
PKDCC-202ENST00000401498 LRP10Q7Z4F1 713 aa38.88■■■■□ 3.81
PKDCC-202ENST00000401498 NPM2Q86SE8 214 aaKnown RBP38.88■■■■□ 3.81
PKDCC-202ENST00000401498 SPON1Q9HCB6 807 aa38.88■■■■□ 3.81
PKDCC-202ENST00000401498 TBC1D2BQ9UPU7 963 aa38.88■■■■□ 3.81
PKDCC-202ENST00000401498 GYS1P13807 737 aa38.87■■■■□ 3.81
PKDCC-202ENST00000401498 CHPF2Q9P2E5 772 aa38.87■■■■□ 3.81
PKDCC-202ENST00000401498 ZPR1O75312 459 aa38.87■■■■□ 3.81
PKDCC-202ENST00000401498 USPL1Q5W0Q7 1092 aa38.87■■■■□ 3.81
PKDCC-202ENST00000401498 DDX21Q9NR30 783 aaKnown RBP eCLIP38.86■■■■□ 3.81
PKDCC-202ENST00000401498 SGIP1Q9BQI5 828 aa38.85■■■■□ 3.81
PKDCC-202ENST00000401498 ZBED9Q6R2W3 1325 aa38.85■■■■□ 3.81
PKDCC-202ENST00000401498 VAMP4O75379 141 aa38.84■■■■□ 3.81
PKDCC-202ENST00000401498 PTGER2P43116 358 aa38.84■■■■□ 3.81
PKDCC-202ENST00000401498 DZIP3Q86Y13 1208 aaKnown RBP38.84■■■■□ 3.81
PKDCC-202ENST00000401498 ARXQ96QS3 562 aa38.84■■■■□ 3.81
PKDCC-202ENST00000401498 DBF4Q9UBU7 674 aaPredicted RBP38.83■■■■□ 3.81
PKDCC-202ENST00000401498 BCL2L12Q9HB09 334 aa38.82■■■■□ 3.8
PKDCC-202ENST00000401498 CAMTA2O94983 1202 aa38.81■■■■□ 3.8
PKDCC-202ENST00000401498 SCN7AQ01118 1682 aa38.81■■■■□ 3.8
PKDCC-202ENST00000401498 CCDC30Q5VVM6 783 aa38.81■■■■□ 3.8
PKDCC-202ENST00000401498 BCORQ6W2J9 1755 aa38.8■■■■□ 3.8
PKDCC-202ENST00000401498 LRP5O75197 1615 aa38.8■■■■□ 3.8
PKDCC-202ENST00000401498 FKBP8Q14318 412 aa38.8■■■■□ 3.8
PKDCC-202ENST00000401498 NLGN1Q8N2Q7 840 aa38.8■■■■□ 3.8
PKDCC-202ENST00000401498 CHMP4AQ9BY43 222 aa38.8■■■■□ 3.8
PKDCC-202ENST00000401498 TTLL7Q6ZT98 887 aa38.79■■■■□ 3.8
PKDCC-202ENST00000401498 TCERG1O14776 1098 aaKnown RBP38.76■■■■□ 3.8
PKDCC-202ENST00000401498 COPS6Q7L5N1 327 aa38.75■■■■□ 3.79
PKDCC-202ENST00000401498 HYPKQ9NX55 129 aa38.75■■■■□ 3.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms