RNA–Protein interactions for RNA: ENST00000400098.6

SNRPN-204, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

TSL 4

Gene SNRPN, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-204ENST00000400098 ZBTB1Q9Y2K1 713 aa11.73□□□□□ -0.53
SNRPN-204ENST00000400098 RPS6KA4O75676 772 aa11.72□□□□□ -0.53
SNRPN-204ENST00000400098 PIP4K2AP48426 406 aaPredicted RBP11.72□□□□□ -0.53
SNRPN-204ENST00000400098 LMOD3Q0VAK6 560 aa11.72□□□□□ -0.53
SNRPN-204ENST00000400098 DIEXFQ68CQ4 756 aaKnown RBP11.72□□□□□ -0.53
SNRPN-204ENST00000400098 ARHGEF1Q92888 912 aaKnown RBP11.72□□□□□ -0.53
SNRPN-204ENST00000400098 CCDC87Q9NVE4 849 aa11.72□□□□□ -0.53
SNRPN-204ENST00000400098 RTCBQ9Y3I0 505 aaKnown RBP11.72□□□□□ -0.53
SNRPN-204ENST00000400098 USP16Q9Y5T5 823 aa11.72□□□□□ -0.53
SNRPN-204ENST00000400098 SOS1Q07889 1333 aaPredicted RBP11.71□□□□□ -0.53
SNRPN-204ENST00000400098 A1BGP04217 495 aa11.71□□□□□ -0.53
SNRPN-204ENST00000400098 CANXP27824 592 aaKnown RBP11.71□□□□□ -0.53
SNRPN-204ENST00000400098 EIF4A1P60842 406 aaKnown RBP11.71□□□□□ -0.53
SNRPN-204ENST00000400098 FLAD1Q8NFF5 587 aa11.71□□□□□ -0.53
SNRPN-204ENST00000400098 SLC16A10Q8TF71 515 aa11.71□□□□□ -0.53
SNRPN-204ENST00000400098 TSPYL4Q9UJ04 414 aa11.71□□□□□ -0.53
SNRPN-204ENST00000400098 LAS1LQ9Y4W2 734 aaKnown RBP11.71□□□□□ -0.53
SNRPN-204ENST00000400098 AFDNP55196 1824 aaKnown RBP11.71□□□□□ -0.54
SNRPN-204ENST00000400098 COL15A1P39059 1388 aa11.7□□□□□ -0.54
SNRPN-204ENST00000400098 TRAPPC3LQ5T215 181 aa11.7□□□□□ -0.54
SNRPN-204ENST00000400098 SRP68Q9UHB9 627 aaKnown RBP11.7□□□□□ -0.54
SNRPN-204ENST00000400098 SALL2Q9Y467 1007 aaPredicted RBP11.7□□□□□ -0.54
SNRPN-204ENST00000400098 KIAA1551Q9HCM1 1747 aa11.69□□□□□ -0.54
SNRPN-204ENST00000400098 SNRPA1P09661 255 aaKnown RBP11.69□□□□□ -0.54
SNRPN-204ENST00000400098 HMGB2P26583 209 aaKnown RBP11.69□□□□□ -0.54
SNRPN-204ENST00000400098 KRT24Q2M2I5 525 aa11.69□□□□□ -0.54
SNRPN-204ENST00000400098 MIER1Q8N108 512 aa11.69□□□□□ -0.54
SNRPN-204ENST00000400098 PPP1R1BQ9UD71 204 aaPredicted RBP11.69□□□□□ -0.54
SNRPN-204ENST00000400098 KIF13BQ9NQT8 1826 aa11.69□□□□□ -0.54
SNRPN-204ENST00000400098 NUP98P52948 1817 aa11.68□□□□□ -0.54
SNRPN-204ENST00000400098 CHL1O00533 1208 aa11.68□□□□□ -0.54
SNRPN-204ENST00000400098 STARD3NLO95772 234 aa11.68□□□□□ -0.54
SNRPN-204ENST00000400098 MAPK8IP2Q13387 824 aaPredicted RBP11.68□□□□□ -0.54
SNRPN-204ENST00000400098 N4BP2Q86UW6 1770 aaPredicted RBP11.67□□□□□ -0.54
SNRPN-204ENST00000400098 USP42Q9H9J4 1324 aaKnown RBP11.67□□□□□ -0.54
SNRPN-204ENST00000400098 NBPF26B4DH59 902 aa11.67□□□□□ -0.54
SNRPN-204ENST00000400098 GIGYF1O75420 1035 aaPredicted RBP11.67□□□□□ -0.54
SNRPN-204ENST00000400098 GYS1P13807 737 aa11.67□□□□□ -0.54
SNRPN-204ENST00000400098 RFC4P35249 363 aa11.67□□□□□ -0.54
SNRPN-204ENST00000400098 NBPF10Q6P3W6 841 aaKnown RBP11.67□□□□□ -0.54
SNRPN-204ENST00000400098 NBPF15Q8N660 670 aa11.67□□□□□ -0.54
SNRPN-204ENST00000400098 ARXQ96QS3 562 aa11.67□□□□□ -0.54
SNRPN-204ENST00000400098 TEX13AQ9BXU3 409 aaPredicted RBP11.67□□□□□ -0.54
SNRPN-204ENST00000400098 MBIPQ9NS73 344 aa11.67□□□□□ -0.54
SNRPN-204ENST00000400098 ZNF330Q9Y3S2 320 aaPredicted RBP11.67□□□□□ -0.54
SNRPN-204ENST00000400098 NRXN2Q9P2S2 1712 aa11.66□□□□□ -0.54
SNRPN-204ENST00000400098 SRCAPQ6ZRS2 3230 aa11.66□□□□□ -0.54
SNRPN-204ENST00000400098 CCER2I3L3R5 266 aa11.66□□□□□ -0.54
SNRPN-204ENST00000400098 ZNF853P0CG23 659 aa11.66□□□□□ -0.54
SNRPN-204ENST00000400098 POLD1P28340 1107 aa11.66□□□□□ -0.54
SNRPN-204ENST00000400098 EIF5P55010 431 aaKnown RBP11.66□□□□□ -0.54
SNRPN-204ENST00000400098 FKBP8Q14318 412 aa11.66□□□□□ -0.54
SNRPN-204ENST00000400098 USPL1Q5W0Q7 1092 aa11.66□□□□□ -0.54
SNRPN-204ENST00000400098 WWC1Q8IX03 1113 aa11.66□□□□□ -0.54
SNRPN-204ENST00000400098 FHDC1Q9C0D6 1143 aaPredicted RBP11.66□□□□□ -0.54
SNRPN-204ENST00000400098 BABAM1Q9NWV8 329 aa11.66□□□□□ -0.54
SNRPN-204ENST00000400098 ANKRD36CQ5JPF3 1778 aa11.65□□□□□ -0.54
SNRPN-204ENST00000400098 CCDC27Q2M243 656 aa11.65□□□□□ -0.54
SNRPN-204ENST00000400098 KLHL34Q8N239 644 aa11.65□□□□□ -0.54
SNRPN-204ENST00000400098 NECTIN2Q92692 538 aa11.65□□□□□ -0.54
SNRPN-204ENST00000400098 CFAP44Q96MT7 982 aa11.65□□□□□ -0.54
SNRPN-204ENST00000400098 BCL2L12Q9HB09 334 aa11.65□□□□□ -0.54
SNRPN-204ENST00000400098 TBC1D2BQ9UPU7 963 aa11.65□□□□□ -0.54
SNRPN-204ENST00000400098 ANKRD31Q8N7Z5 1873 aa11.64□□□□□ -0.55
SNRPN-204ENST00000400098 MMP10P09238 476 aa11.64□□□□□ -0.55
SNRPN-204ENST00000400098 IL6STP40189 918 aaPredicted RBP11.64□□□□□ -0.55
SNRPN-204ENST00000400098 TSR2Q969E8 191 aaKnown RBP11.64□□□□□ -0.55
SNRPN-204ENST00000400098 IFT57Q9NWB7 429 aa11.64□□□□□ -0.55
SNRPN-204ENST00000400098 NARFQ9UHQ1 456 aa11.64□□□□□ -0.55
SNRPN-204ENST00000400098 BRCA1P38398 1863 aaKnown RBP11.63□□□□□ -0.55
SNRPN-204ENST00000400098 ZPR1O75312 459 aa11.63□□□□□ -0.55
SNRPN-204ENST00000400098 ANXA1P04083 346 aa11.63□□□□□ -0.55
SNRPN-204ENST00000400098 EIF2S2P20042 333 aaKnown RBP11.63□□□□□ -0.55
SNRPN-204ENST00000400098 GNAI1P63096 354 aa11.63□□□□□ -0.55
SNRPN-204ENST00000400098 DDR1Q08345 913 aa11.63□□□□□ -0.55
SNRPN-204ENST00000400098 ARFGEF2Q9Y6D5 1785 aa11.62□□□□□ -0.55
SNRPN-204ENST00000400098 CACNA1SQ13698 1873 aa11.62□□□□□ -0.55
SNRPN-204ENST00000400098 CAMTA2O94983 1202 aa11.62□□□□□ -0.55
SNRPN-204ENST00000400098 MYL6BP14649 208 aa11.62□□□□□ -0.55
SNRPN-204ENST00000400098 PROSER3Q2NL68 480 aa11.62□□□□□ -0.55
SNRPN-204ENST00000400098 DZIP3Q86Y13 1208 aaKnown RBP11.62□□□□□ -0.55
SNRPN-204ENST00000400098 NGEFQ8N5V2 710 aa11.62□□□□□ -0.55
SNRPN-204ENST00000400098 NLGN2Q8NFZ4 835 aa11.62□□□□□ -0.55
SNRPN-204ENST00000400098 SYT17Q9BSW7 474 aa11.62□□□□□ -0.55
SNRPN-204ENST00000400098 SPINK5Q9NQ38 1064 aaPredicted RBP11.62□□□□□ -0.55
SNRPN-204ENST00000400098 DLEC1Q9Y238 1755 aa11.62□□□□□ -0.55
SNRPN-204ENST00000400098 COL11A2P13942 1736 aaPredicted RBP11.61□□□□□ -0.55
SNRPN-204ENST00000400098 A0A087WZG4 1122 aa11.61□□□□□ -0.55
SNRPN-204ENST00000400098 ELL2O00472 640 aaPredicted RBP11.61□□□□□ -0.55
SNRPN-204ENST00000400098 CALD1Q05682 793 aaKnown RBP11.61□□□□□ -0.55
SNRPN-204ENST00000400098 PDIA6Q15084 440 aa11.61□□□□□ -0.55
SNRPN-204ENST00000400098 DUSP27Q5VZP5 1158 aa11.61□□□□□ -0.55
SNRPN-204ENST00000400098 NLGN1Q8N2Q7 840 aa11.61□□□□□ -0.55
SNRPN-204ENST00000400098 C8orf58Q8NAV2 365 aa11.61□□□□□ -0.55
SNRPN-204ENST00000400098 C10orf71Q711Q0 1435 aa11.6□□□□□ -0.55
SNRPN-204ENST00000400098 POLRMTO00411 1230 aaKnown RBP11.6□□□□□ -0.55
SNRPN-204ENST00000400098 TM4SF1P30408 202 aa11.6□□□□□ -0.55
SNRPN-204ENST00000400098 NFIXQ14938 502 aa11.6□□□□□ -0.55
SNRPN-204ENST00000400098 NCBP3Q53F19 620 aaKnown RBP11.6□□□□□ -0.55
SNRPN-204ENST00000400098 TBC1D9BQ66K14 1250 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms