RNA–Protein interactions for RNA: ENST00000399600.8

SCIMP-201, Transcript of SLP adaptor and CSK interacting membrane protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCIMP, Length 1,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCIMP-201ENST00000399600 RPS6KA4O75676 772 aa12.08□□□□□ -0.48
SCIMP-201ENST00000399600 CYP19A1P11511 503 aaPredicted RBP12.08□□□□□ -0.48
SCIMP-201ENST00000399600 SSFA2P28290 1259 aa12.08□□□□□ -0.48
SCIMP-201ENST00000399600 PTGER2P43116 358 aa12.08□□□□□ -0.48
SCIMP-201ENST00000399600 CRKLP46109 303 aaKnown RBP12.08□□□□□ -0.48
SCIMP-201ENST00000399600 NEUROD2Q15784 382 aa12.08□□□□□ -0.48
SCIMP-201ENST00000399600 SGIP1Q9BQI5 828 aa12.08□□□□□ -0.48
SCIMP-201ENST00000399600 MIS18AQ9NYP9 233 aa12.08□□□□□ -0.48
SCIMP-201ENST00000399600 TRIM35Q9UPQ4 493 aa12.08□□□□□ -0.48
SCIMP-201ENST00000399600 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.07□□□□□ -0.48
SCIMP-201ENST00000399600 INTS5Q6P9B9 1019 aaKnown RBP12.07□□□□□ -0.48
SCIMP-201ENST00000399600 RTCBQ9Y3I0 505 aaKnown RBP12.07□□□□□ -0.48
SCIMP-201ENST00000399600 HEG1Q9ULI3 1381 aa12.06□□□□□ -0.48
SCIMP-201ENST00000399600 KDM3BQ7LBC6 1761 aa12.06□□□□□ -0.48
SCIMP-201ENST00000399600 APAF1O14727 1248 aa12.06□□□□□ -0.48
SCIMP-201ENST00000399600 PHF14O94880 888 aa12.06□□□□□ -0.48
SCIMP-201ENST00000399600 LMOD3Q0VAK6 560 aa12.06□□□□□ -0.48
SCIMP-201ENST00000399600 FMNL2Q96PY5 1086 aa12.06□□□□□ -0.48
SCIMP-201ENST00000399600 TEX13AQ9BXU3 409 aaPredicted RBP12.06□□□□□ -0.48
SCIMP-201ENST00000399600 TRAPPC3LQ5T215 181 aa12.05□□□□□ -0.48
SCIMP-201ENST00000399600 ARHGEF1Q92888 912 aaKnown RBP12.05□□□□□ -0.48
SCIMP-201ENST00000399600 CCDC87Q9NVE4 849 aa12.05□□□□□ -0.48
SCIMP-201ENST00000399600 STARD3NLO95772 234 aa12.04□□□□□ -0.48
SCIMP-201ENST00000399600 USP16Q9Y5T5 823 aa12.04□□□□□ -0.48
SCIMP-201ENST00000399600 PRAMEF22A3QJZ6 481 aa12.03□□□□□ -0.48
SCIMP-201ENST00000399600 SNRPA1P09661 255 aaKnown RBP12.03□□□□□ -0.48
SCIMP-201ENST00000399600 EIF4A1P60842 406 aaKnown RBP12.03□□□□□ -0.48
SCIMP-201ENST00000399600 BABAM1Q9NWV8 329 aa12.03□□□□□ -0.48
SCIMP-201ENST00000399600 ZNF219Q9P2Y4 722 aaPredicted RBP12.03□□□□□ -0.48
SCIMP-201ENST00000399600 C4AP0C0L4 1744 aa12.03□□□□□ -0.48
SCIMP-201ENST00000399600 CHL1O00533 1208 aa12.02□□□□□ -0.49
SCIMP-201ENST00000399600 MSL1Q68DK7 614 aa12.02□□□□□ -0.49
SCIMP-201ENST00000399600 ZBTB1Q9Y2K1 713 aa12.02□□□□□ -0.49
SCIMP-201ENST00000399600 SOS1Q07889 1333 aaPredicted RBP12.02□□□□□ -0.49
SCIMP-201ENST00000399600 GIGYF1O75420 1035 aaPredicted RBP12.01□□□□□ -0.49
SCIMP-201ENST00000399600 A1BGP04217 495 aa12.01□□□□□ -0.49
SCIMP-201ENST00000399600 CANXP27824 592 aaKnown RBP12.01□□□□□ -0.49
SCIMP-201ENST00000399600 RFC4P35249 363 aa12.01□□□□□ -0.49
SCIMP-201ENST00000399600 EIF5P55010 431 aaKnown RBP12.01□□□□□ -0.49
SCIMP-201ENST00000399600 ARXQ96QS3 562 aa12.01□□□□□ -0.49
SCIMP-201ENST00000399600 TSPYL4Q9UJ04 414 aa12.01□□□□□ -0.49
SCIMP-201ENST00000399600 GYS1P13807 737 aa12□□□□□ -0.49
SCIMP-201ENST00000399600 POLD1P28340 1107 aa12□□□□□ -0.49
SCIMP-201ENST00000399600 FAM9BQ8IZU0 186 aa12□□□□□ -0.49
SCIMP-201ENST00000399600 SENP3-EIF4A1A0A087X0R7 540 aa11.99□□□□□ -0.49
SCIMP-201ENST00000399600 ZNF853P0CG23 659 aa11.99□□□□□ -0.49
SCIMP-201ENST00000399600 CCDC27Q2M243 656 aa11.99□□□□□ -0.49
SCIMP-201ENST00000399600 DIEXFQ68CQ4 756 aaKnown RBP11.99□□□□□ -0.49
SCIMP-201ENST00000399600 NLGN1Q8N2Q7 840 aa11.99□□□□□ -0.49
SCIMP-201ENST00000399600 CFAP44Q96MT7 982 aa11.99□□□□□ -0.49
SCIMP-201ENST00000399600 SRP68Q9UHB9 627 aaKnown RBP11.99□□□□□ -0.49
SCIMP-201ENST00000399600 COL15A1P39059 1388 aa11.98□□□□□ -0.49
SCIMP-201ENST00000399600 USP42Q9H9J4 1324 aaKnown RBP11.98□□□□□ -0.49
SCIMP-201ENST00000399600 CCER2I3L3R5 266 aa11.98□□□□□ -0.49
SCIMP-201ENST00000399600 CAPN15O75808 1086 aa11.98□□□□□ -0.49
SCIMP-201ENST00000399600 IL6STP40189 918 aaPredicted RBP11.98□□□□□ -0.49
SCIMP-201ENST00000399600 SYT17Q9BSW7 474 aa11.98□□□□□ -0.49
SCIMP-201ENST00000399600 FHDC1Q9C0D6 1143 aaPredicted RBP11.98□□□□□ -0.49
SCIMP-201ENST00000399600 SPINK5Q9NQ38 1064 aaPredicted RBP11.98□□□□□ -0.49
SCIMP-201ENST00000399600 NARFQ9UHQ1 456 aa11.98□□□□□ -0.49
SCIMP-201ENST00000399600 LAS1LQ9Y4W2 734 aaKnown RBP11.98□□□□□ -0.49
SCIMP-201ENST00000399600 LAMB4A4D0S4 1761 aa11.97□□□□□ -0.49
SCIMP-201ENST00000399600 NBPF26B4DH59 902 aa11.97□□□□□ -0.49
SCIMP-201ENST00000399600 ZPR1O75312 459 aa11.97□□□□□ -0.49
SCIMP-201ENST00000399600 PIP4K2AP48426 406 aaPredicted RBP11.97□□□□□ -0.49
SCIMP-201ENST00000399600 USPL1Q5W0Q7 1092 aa11.97□□□□□ -0.49
SCIMP-201ENST00000399600 NBPF10Q6P3W6 841 aaKnown RBP11.97□□□□□ -0.49
SCIMP-201ENST00000399600 WWC1Q8IX03 1113 aa11.97□□□□□ -0.49
SCIMP-201ENST00000399600 NBPF15Q8N660 670 aa11.97□□□□□ -0.49
SCIMP-201ENST00000399600 A0A087WZG4 1122 aa11.96□□□□□ -0.49
SCIMP-201ENST00000399600 MMP10P09238 476 aa11.96□□□□□ -0.49
SCIMP-201ENST00000399600 TM4SF1P30408 202 aa11.96□□□□□ -0.49
SCIMP-201ENST00000399600 CALD1Q05682 793 aaKnown RBP11.96□□□□□ -0.49
SCIMP-201ENST00000399600 FKBP8Q14318 412 aa11.96□□□□□ -0.49
SCIMP-201ENST00000399600 KRT24Q2M2I5 525 aa11.96□□□□□ -0.49
SCIMP-201ENST00000399600 BCL2L12Q9HB09 334 aa11.96□□□□□ -0.49
SCIMP-201ENST00000399600 MBIPQ9NS73 344 aa11.96□□□□□ -0.49
SCIMP-201ENST00000399600 IFT57Q9NWB7 429 aa11.96□□□□□ -0.49
SCIMP-201ENST00000399600 TBC1D2BQ9UPU7 963 aa11.96□□□□□ -0.49
SCIMP-201ENST00000399600 GNAI1P63096 354 aa11.95□□□□□ -0.5
SCIMP-201ENST00000399600 MIER1Q8N108 512 aa11.95□□□□□ -0.5
SCIMP-201ENST00000399600 NGEFQ8N5V2 710 aa11.94□□□□□ -0.5
SCIMP-201ENST00000399600 ZNF330Q9Y3S2 320 aaPredicted RBP11.94□□□□□ -0.5
SCIMP-201ENST00000399600 SALL2Q9Y467 1007 aaPredicted RBP11.94□□□□□ -0.5
SCIMP-201ENST00000399600 AFDNP55196 1824 aaKnown RBP11.93□□□□□ -0.5
SCIMP-201ENST00000399600 CAMTA2O94983 1202 aa11.93□□□□□ -0.5
SCIMP-201ENST00000399600 EIF2S2P20042 333 aaKnown RBP11.93□□□□□ -0.5
SCIMP-201ENST00000399600 PDIA6Q15084 440 aa11.93□□□□□ -0.5
SCIMP-201ENST00000399600 NPM2Q86SE8 214 aaKnown RBP11.93□□□□□ -0.5
SCIMP-201ENST00000399600 DZIP3Q86Y13 1208 aaKnown RBP11.93□□□□□ -0.5
SCIMP-201ENST00000399600 CD2APQ9Y5K6 639 aa11.93□□□□□ -0.5
SCIMP-201ENST00000399600 NUP98P52948 1817 aa11.93□□□□□ -0.5
SCIMP-201ENST00000399600 KIF13BQ9NQT8 1826 aa11.93□□□□□ -0.5
SCIMP-201ENST00000399600 IL16Q14005 1332 aa11.92□□□□□ -0.5
SCIMP-201ENST00000399600 ERBB4Q15303 1308 aa11.92□□□□□ -0.5
SCIMP-201ENST00000399600 DDR1Q08345 913 aa11.92□□□□□ -0.5
SCIMP-201ENST00000399600 NFIXQ14938 502 aa11.92□□□□□ -0.5
SCIMP-201ENST00000399600 DUSP27Q5VZP5 1158 aa11.92□□□□□ -0.5
SCIMP-201ENST00000399600 LRP10Q7Z4F1 713 aa11.92□□□□□ -0.5
SCIMP-201ENST00000399600 WDR63Q8IWG1 891 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms