RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 DMRTB1Q96MA1 342 aa2.95□□□□□ -1.94
HMGN2P39-201ENST00000398005 CCDC85AQ96PX6 553 aaPredicted RBP2.95□□□□□ -1.94
HMGN2P39-201ENST00000398005 PURBQ96QR8 312 aaKnown RBP2.95□□□□□ -1.94
HMGN2P39-201ENST00000398005 ARHGAP9Q9BRR9 750 aa2.95□□□□□ -1.94
HMGN2P39-201ENST00000398005 OSBPL2Q9H1P3 480 aa2.95□□□□□ -1.94
HMGN2P39-201ENST00000398005 METTL14Q9HCE5 456 aaKnown RBP2.95□□□□□ -1.94
HMGN2P39-201ENST00000398005 RNF19AQ9NV58 838 aa2.95□□□□□ -1.94
HMGN2P39-201ENST00000398005 PKD2L1Q9P0L9 805 aa2.95□□□□□ -1.94
HMGN2P39-201ENST00000398005 DACH1Q9UI36 760 aa2.95□□□□□ -1.94
HMGN2P39-201ENST00000398005 CHIC2Q9UKJ5 165 aa2.95□□□□□ -1.94
HMGN2P39-201ENST00000398005 SLC27A5Q9Y2P5 690 aa2.95□□□□□ -1.94
HMGN2P39-201ENST00000398005 TBX22Q9Y458 520 aa2.95□□□□□ -1.94
HMGN2P39-201ENST00000398005 PPME1Q9Y570 386 aa2.95□□□□□ -1.94
HMGN2P39-201ENST00000398005 WEE1P30291 646 aa2.94□□□□□ -1.94
HMGN2P39-201ENST00000398005 TCEAL1Q15170 157 aa2.94□□□□□ -1.94
HMGN2P39-201ENST00000398005 PTPRNQ16849 979 aa2.94□□□□□ -1.94
HMGN2P39-201ENST00000398005 MORN1Q5T089 497 aa2.94□□□□□ -1.94
HMGN2P39-201ENST00000398005 NBPF14Q5TI25 921 aa2.94□□□□□ -1.94
HMGN2P39-201ENST00000398005 CC2D2BQ6DHV5 1058 aa2.94□□□□□ -1.94
HMGN2P39-201ENST00000398005 RNF19BQ6ZMZ0 732 aa2.94□□□□□ -1.94
HMGN2P39-201ENST00000398005 NLGN1Q8N2Q7 840 aa2.94□□□□□ -1.94
HMGN2P39-201ENST00000398005 GPKOWQ92917 476 aaPredicted RBP eCLIP2.94□□□□□ -1.94
HMGN2P39-201ENST00000398005 KCNB2Q92953 911 aa2.94□□□□□ -1.94
HMGN2P39-201ENST00000398005 MRFAP1L1Q96HT8 127 aa2.94□□□□□ -1.94
HMGN2P39-201ENST00000398005 USB1Q9BQ65 265 aaKnown RBP2.94□□□□□ -1.94
HMGN2P39-201ENST00000398005 CYLDQ9NQC7 956 aa2.94□□□□□ -1.94
HMGN2P39-201ENST00000398005 KLHL42Q9P2K6 505 aa2.94□□□□□ -1.94
HMGN2P39-201ENST00000398005 WWC3Q9ULE0 1092 aa2.94□□□□□ -1.94
HMGN2P39-201ENST00000398005 PNMA6FA0A0J9YX94 578 aa2.93□□□□□ -1.94
HMGN2P39-201ENST00000398005 PLEKHD1A6NEE1 506 aa2.93□□□□□ -1.94
HMGN2P39-201ENST00000398005 NPR3P17342 541 aa2.93□□□□□ -1.94
HMGN2P39-201ENST00000398005 JUNDP17535 347 aa2.93□□□□□ -1.94
HMGN2P39-201ENST00000398005 RBL2Q08999 1139 aa2.93□□□□□ -1.94
HMGN2P39-201ENST00000398005 USP4Q13107 963 aa2.93□□□□□ -1.94
HMGN2P39-201ENST00000398005 DSC3Q14574 896 aa2.93□□□□□ -1.94
HMGN2P39-201ENST00000398005 NFE2L2Q16236 605 aa2.93□□□□□ -1.94
HMGN2P39-201ENST00000398005 ZNF394Q53GI3 561 aa2.93□□□□□ -1.94
HMGN2P39-201ENST00000398005 CCDC181Q5TID7 509 aa2.93□□□□□ -1.94
HMGN2P39-201ENST00000398005 RNF20Q5VTR2 975 aa2.93□□□□□ -1.94
HMGN2P39-201ENST00000398005 ALKBH2Q6NS38 261 aa2.93□□□□□ -1.94
HMGN2P39-201ENST00000398005 ZNF746Q6NUN9 644 aaPredicted RBP2.93□□□□□ -1.94
HMGN2P39-201ENST00000398005 SCUBE3Q8IX30 993 aa2.93□□□□□ -1.94
HMGN2P39-201ENST00000398005 ZNF654Q8IZM8 581 aa2.93□□□□□ -1.94
HMGN2P39-201ENST00000398005 COL26A1Q96A83 441 aa2.93□□□□□ -1.94
HMGN2P39-201ENST00000398005 CITED4Q96RK1 184 aa2.93□□□□□ -1.94
HMGN2P39-201ENST00000398005 SETDB2Q96T68 719 aa2.93□□□□□ -1.94
HMGN2P39-201ENST00000398005 GMLQ99445 158 aa2.93□□□□□ -1.94
HMGN2P39-201ENST00000398005 OCSTAMPQ9BR26 566 aa2.93□□□□□ -1.94
HMGN2P39-201ENST00000398005 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.93□□□□□ -1.94
HMGN2P39-201ENST00000398005 SLC6A16Q9GZN6 736 aa2.93□□□□□ -1.94
HMGN2P39-201ENST00000398005 MYH16Q9H6N6 1097 aa2.93□□□□□ -1.94
HMGN2P39-201ENST00000398005 CCDC87Q9NVE4 849 aa2.93□□□□□ -1.94
HMGN2P39-201ENST00000398005 DMGDHQ9UI17 866 aaKnown RBP2.93□□□□□ -1.94
HMGN2P39-201ENST00000398005 NOP58Q9Y2X3 529 aaKnown RBP2.93□□□□□ -1.94
HMGN2P39-201ENST00000398005 PCDHGA11Q9Y5H2 935 aa2.93□□□□□ -1.94
HMGN2P39-201ENST00000398005 EMILIN1Q9Y6C2 1016 aa2.93□□□□□ -1.94
HMGN2P39-201ENST00000398005 MRPL42Q9Y6G3 142 aaKnown RBP2.93□□□□□ -1.94
HMGN2P39-201ENST00000398005 MAGEB6P1A0A0J9YX57 407 aa2.92□□□□□ -1.94
HMGN2P39-201ENST00000398005 M0R2N6 131 aa2.92□□□□□ -1.94
HMGN2P39-201ENST00000398005 TPD52L2O43399 206 aaKnown RBP2.92□□□□□ -1.94
HMGN2P39-201ENST00000398005 FOXO3O43524 673 aa2.92□□□□□ -1.94
HMGN2P39-201ENST00000398005 GIGYF1O75420 1035 aaPredicted RBP2.92□□□□□ -1.94
HMGN2P39-201ENST00000398005 NR1I2O75469 434 aa2.92□□□□□ -1.94
HMGN2P39-201ENST00000398005 AVPP01185 164 aa2.92□□□□□ -1.94
HMGN2P39-201ENST00000398005 CCNYL3P0C7X3 344 aa2.92□□□□□ -1.94
HMGN2P39-201ENST00000398005 HSD3B2P26439 372 aa2.92□□□□□ -1.94
HMGN2P39-201ENST00000398005 EIF1AXP47813 144 aaKnown RBP2.92□□□□□ -1.94
HMGN2P39-201ENST00000398005 FOXC1Q12948 553 aa2.92□□□□□ -1.94
HMGN2P39-201ENST00000398005 GORABQ5T7V8 394 aa2.92□□□□□ -1.94
HMGN2P39-201ENST00000398005 ALG1LQ6GMV1 187 aa2.92□□□□□ -1.94
HMGN2P39-201ENST00000398005 FILIP1Q7Z7B0 1213 aa2.92□□□□□ -1.94
HMGN2P39-201ENST00000398005 USP48Q86UV5 1035 aa2.92□□□□□ -1.94
HMGN2P39-201ENST00000398005 JAZF1Q86VZ6 243 aa2.92□□□□□ -1.94
HMGN2P39-201ENST00000398005 MCF2L2Q86YR7 1114 aa2.92□□□□□ -1.94
HMGN2P39-201ENST00000398005 CRIPAKQ8N1N5 446 aa2.92□□□□□ -1.94
HMGN2P39-201ENST00000398005 SERBP1Q8NC51 408 aaKnown RBP eCLIP2.92□□□□□ -1.94
HMGN2P39-201ENST00000398005 CHMP7Q8WUX9 453 aaPredicted RBP2.92□□□□□ -1.94
HMGN2P39-201ENST00000398005 SCG3Q8WXD2 468 aaKnown RBP2.92□□□□□ -1.94
HMGN2P39-201ENST00000398005 CARD14Q9BXL6 1004 aa2.92□□□□□ -1.94
HMGN2P39-201ENST00000398005 NIF3L1Q9GZT8 377 aa2.92□□□□□ -1.94
HMGN2P39-201ENST00000398005 ESF1Q9H501 851 aaKnown RBP2.92□□□□□ -1.94
HMGN2P39-201ENST00000398005 TOR4AQ9NXH8 423 aa2.92□□□□□ -1.94
HMGN2P39-201ENST00000398005 SUGT1Q9Y2Z0 365 aa2.92□□□□□ -1.94
HMGN2P39-201ENST00000398005 RIPOR2Q9Y4F9 1068 aa2.92□□□□□ -1.94
HMGN2P39-201ENST00000398005 PCDHB11Q9Y5F2 797 aa2.92□□□□□ -1.94
HMGN2P39-201ENST00000398005 PCDHGB7Q9Y5F8 929 aa2.92□□□□□ -1.94
HMGN2P39-201ENST00000398005 LOC102724159A0A0B4J2E5 919 aa2.91□□□□□ -1.94
HMGN2P39-201ENST00000398005 LOC100996750A0A140TA64 210 aa2.91□□□□□ -1.94
HMGN2P39-201ENST00000398005 K7ELQ4 463 aaPredicted RBP2.91□□□□□ -1.94
HMGN2P39-201ENST00000398005 GPR182O15218 404 aa2.91□□□□□ -1.94
HMGN2P39-201ENST00000398005 FZD6O60353 706 aa2.91□□□□□ -1.94
HMGN2P39-201ENST00000398005 MYCP01106 439 aaPredicted RBP2.91□□□□□ -1.94
HMGN2P39-201ENST00000398005 IGFBP4P22692 258 aa2.91□□□□□ -1.94
HMGN2P39-201ENST00000398005 GNA15P30679 374 aa2.91□□□□□ -1.94
HMGN2P39-201ENST00000398005 RACK1P63244 317 aaKnown RBP2.91□□□□□ -1.94
HMGN2P39-201ENST00000398005 NFX1Q12986 1120 aaKnown RBP2.91□□□□□ -1.94
HMGN2P39-201ENST00000398005 AGERQ15109 404 aa2.91□□□□□ -1.94
HMGN2P39-201ENST00000398005 PWP2Q15269 919 aaKnown RBP2.91□□□□□ -1.94
HMGN2P39-201ENST00000398005 ENOX2Q16206 610 aaKnown RBP2.91□□□□□ -1.94
HMGN2P39-201ENST00000398005 NBPF20Q3BBV1 942 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms