RNA–Protein interactions for RNA: ENST00000397772.2

TPM3P2-201, Transcript of tropomyosin 3 pseudogene 2, humanhuman

BASIC

Gene TPM3P2, Length 723 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P2-201ENST00000397772 TRAPPC3LQ5T215 181 aa12.93□□□□□ -0.34
TPM3P2-201ENST00000397772 ARHGEF1Q92888 912 aaKnown RBP12.93□□□□□ -0.34
TPM3P2-201ENST00000397772 PPM1GO15355 546 aaPredicted RBP12.92□□□□□ -0.34
TPM3P2-201ENST00000397772 COL13A1Q5TAT6 717 aaPredicted RBP12.92□□□□□ -0.34
TPM3P2-201ENST00000397772 IFNL2Q8IZJ0 200 aa12.92□□□□□ -0.34
TPM3P2-201ENST00000397772 NLGN1Q8N2Q7 840 aa12.92□□□□□ -0.34
TPM3P2-201ENST00000397772 RTCBQ9Y3I0 505 aaKnown RBP12.92□□□□□ -0.34
TPM3P2-201ENST00000397772 FCHSD2O94868 740 aa12.91□□□□□ -0.34
TPM3P2-201ENST00000397772 C9orf131Q5VYM1 1079 aa12.91□□□□□ -0.34
TPM3P2-201ENST00000397772 RBM46Q8TBY0 533 aaKnown RBP12.91□□□□□ -0.34
TPM3P2-201ENST00000397772 BRCA1P38398 1863 aaKnown RBP12.91□□□□□ -0.34
TPM3P2-201ENST00000397772 WDR90Q96KV7 1748 aa12.91□□□□□ -0.34
TPM3P2-201ENST00000397772 RC3H1Q5TC82 1133 aaKnown RBP12.9□□□□□ -0.34
TPM3P2-201ENST00000397772 FAM9BQ8IZU0 186 aa12.9□□□□□ -0.34
TPM3P2-201ENST00000397772 JMYQ8N9B5 988 aa12.9□□□□□ -0.34
TPM3P2-201ENST00000397772 KLRG1Q96E93 195 aa12.9□□□□□ -0.34
TPM3P2-201ENST00000397772 CCDC87Q9NVE4 849 aa12.9□□□□□ -0.34
TPM3P2-201ENST00000397772 POLKQ9UBT6 870 aa12.9□□□□□ -0.34
TPM3P2-201ENST00000397772 C4AP0C0L4 1744 aa12.9□□□□□ -0.34
TPM3P2-201ENST00000397772 RPS6KA4O75676 772 aa12.89□□□□□ -0.35
TPM3P2-201ENST00000397772 PRR29P0C7W0 189 aa12.89□□□□□ -0.35
TPM3P2-201ENST00000397772 PNISRQ8TF01 805 aaKnown RBP12.89□□□□□ -0.35
TPM3P2-201ENST00000397772 MYH14Q7Z406 1995 aaKnown RBP12.89□□□□□ -0.35
TPM3P2-201ENST00000397772 CNTNAP4Q9C0A0 1308 aa12.88□□□□□ -0.35
TPM3P2-201ENST00000397772 KCPQ6ZWJ8 1503 aa12.88□□□□□ -0.35
TPM3P2-201ENST00000397772 EIF4A2Q14240 407 aaKnown RBP12.88□□□□□ -0.35
TPM3P2-201ENST00000397772 DCAF5Q96JK2 942 aa12.88□□□□□ -0.35
TPM3P2-201ENST00000397772 ZNF831Q5JPB2 1677 aa12.88□□□□□ -0.35
TPM3P2-201ENST00000397772 COL5A3P25940 1745 aaPredicted RBP12.88□□□□□ -0.35
TPM3P2-201ENST00000397772 ERVV-2B6SEH9 535 aa12.87□□□□□ -0.35
TPM3P2-201ENST00000397772 CFAP53Q96M91 514 aa12.87□□□□□ -0.35
TPM3P2-201ENST00000397772 SRP68Q9UHB9 627 aaKnown RBP12.87□□□□□ -0.35
TPM3P2-201ENST00000397772 PARP3Q9Y6F1 533 aa12.87□□□□□ -0.35
TPM3P2-201ENST00000397772 ARFGEF1Q9Y6D6 1849 aa12.86□□□□□ -0.35
TPM3P2-201ENST00000397772 RFC4P35249 363 aa12.86□□□□□ -0.35
TPM3P2-201ENST00000397772 DDR1Q08345 913 aa12.86□□□□□ -0.35
TPM3P2-201ENST00000397772 FSTL1Q12841 308 aa12.86□□□□□ -0.35
TPM3P2-201ENST00000397772 FKBP8Q14318 412 aa12.86□□□□□ -0.35
TPM3P2-201ENST00000397772 RRAGCQ9HB90 399 aa12.86□□□□□ -0.35
TPM3P2-201ENST00000397772 PIM2Q9P1W9 311 aa12.86□□□□□ -0.35
TPM3P2-201ENST00000397772 KDM6AO15550 1401 aaPredicted RBP12.86□□□□□ -0.35
TPM3P2-201ENST00000397772 PLEKHG2Q9H7P9 1386 aa12.85□□□□□ -0.35
TPM3P2-201ENST00000397772 CHRNA5P30532 468 aa12.85□□□□□ -0.35
TPM3P2-201ENST00000397772 HNRNPUQ00839 825 aaKnown RBP eCLIP12.85□□□□□ -0.35
TPM3P2-201ENST00000397772 WDR43Q15061 677 aaKnown RBP eCLIP12.85□□□□□ -0.35
TPM3P2-201ENST00000397772 RNF181Q9P0P0 153 aa12.85□□□□□ -0.35
TPM3P2-201ENST00000397772 GABBR2O75899 941 aa12.84□□□□□ -0.35
TPM3P2-201ENST00000397772 TNNT2P45379 298 aaPredicted RBP12.84□□□□□ -0.35
TPM3P2-201ENST00000397772 DALRD3Q5D0E6 543 aaKnown RBP12.84□□□□□ -0.35
TPM3P2-201ENST00000397772 C16orf71Q8IYS4 520 aaPredicted RBP12.84□□□□□ -0.35
TPM3P2-201ENST00000397772 CRKLP46109 303 aaKnown RBP12.83□□□□□ -0.36
TPM3P2-201ENST00000397772 PRELPP51888 382 aa12.83□□□□□ -0.36
TPM3P2-201ENST00000397772 KDM2BQ8NHM5 1336 aa12.83□□□□□ -0.36
TPM3P2-201ENST00000397772 USP42Q9H9J4 1324 aaKnown RBP12.83□□□□□ -0.36
TPM3P2-201ENST00000397772 SBF1O95248 1867 aa12.82□□□□□ -0.36
TPM3P2-201ENST00000397772 POLRMTO00411 1230 aaKnown RBP12.82□□□□□ -0.36
TPM3P2-201ENST00000397772 PTCD1O75127 700 aaKnown RBP12.82□□□□□ -0.36
TPM3P2-201ENST00000397772 TM4SF1P30408 202 aa12.82□□□□□ -0.36
TPM3P2-201ENST00000397772 MTHFSP49914 203 aa12.82□□□□□ -0.36
TPM3P2-201ENST00000397772 CABP4P57796 275 aa12.82□□□□□ -0.36
TPM3P2-201ENST00000397772 INTS5Q6P9B9 1019 aaKnown RBP12.82□□□□□ -0.36
TPM3P2-201ENST00000397772 ADAMTS7Q9UKP4 1686 aa12.81□□□□□ -0.36
TPM3P2-201ENST00000397772 COL3A1P02461 1466 aaPredicted RBP12.81□□□□□ -0.36
TPM3P2-201ENST00000397772 HSP90AB1P08238 724 aaKnown RBP12.81□□□□□ -0.36
TPM3P2-201ENST00000397772 RASSF7Q02833 373 aa12.81□□□□□ -0.36
TPM3P2-201ENST00000397772 ZBED9Q6R2W3 1325 aa12.81□□□□□ -0.36
TPM3P2-201ENST00000397772 PLEKHO1Q53GL0 409 aaPredicted RBP12.8□□□□□ -0.36
TPM3P2-201ENST00000397772 ZNF530Q6P9A1 599 aaPredicted RBP12.8□□□□□ -0.36
TPM3P2-201ENST00000397772 AEBP1Q8IUX7 1158 aa12.8□□□□□ -0.36
TPM3P2-201ENST00000397772 TNS4Q8IZW8 715 aa12.8□□□□□ -0.36
TPM3P2-201ENST00000397772 NFATC2IPQ8NCF5 419 aa12.8□□□□□ -0.36
TPM3P2-201ENST00000397772 TJP1Q07157 1748 aa12.79□□□□□ -0.36
TPM3P2-201ENST00000397772 SMC1BQ8NDV3 1235 aa12.79□□□□□ -0.36
TPM3P2-201ENST00000397772 NUDCQ9Y266 331 aa12.79□□□□□ -0.36
TPM3P2-201ENST00000397772 TNRC6CQ9HCJ0 1690 aaKnown RBP12.79□□□□□ -0.36
TPM3P2-201ENST00000397772 USPL1Q5W0Q7 1092 aa12.78□□□□□ -0.36
TPM3P2-201ENST00000397772 POTECB2RU33 542 aa12.77□□□□□ -0.37
TPM3P2-201ENST00000397772 AMOTQ4VCS5 1084 aa12.77□□□□□ -0.37
TPM3P2-201ENST00000397772 GLTPD2A6NH11 291 aa12.76□□□□□ -0.37
TPM3P2-201ENST00000397772 HSPA1AP0DMV8 641 aaKnown RBP12.76□□□□□ -0.37
TPM3P2-201ENST00000397772 HSPA1BP0DMV9 641 aaKnown RBP12.76□□□□□ -0.37
TPM3P2-201ENST00000397772 NFIXQ14938 502 aa12.76□□□□□ -0.37
TPM3P2-201ENST00000397772 DNAJC10Q8IXB1 793 aa12.76□□□□□ -0.37
TPM3P2-201ENST00000397772 BCL2L12Q9HB09 334 aa12.76□□□□□ -0.37
TPM3P2-201ENST00000397772 ADAMTS8Q9UP79 889 aa12.76□□□□□ -0.37
TPM3P2-201ENST00000397772 SOS1Q07889 1333 aaPredicted RBP12.76□□□□□ -0.37
TPM3P2-201ENST00000397772 DIAPH1O60610 1272 aaKnown RBP12.75□□□□□ -0.37
TPM3P2-201ENST00000397772 VEGFAP15692 232 aaPredicted RBP12.75□□□□□ -0.37
TPM3P2-201ENST00000397772 LMNB1P20700 586 aa12.75□□□□□ -0.37
TPM3P2-201ENST00000397772 NGEFQ8N5V2 710 aa12.75□□□□□ -0.37
TPM3P2-201ENST00000397772 ZC3H4Q9UPT8 1303 aaKnown RBP12.75□□□□□ -0.37
TPM3P2-201ENST00000397772 FARP1Q9Y4F1 1045 aaPredicted RBP12.75□□□□□ -0.37
TPM3P2-201ENST00000397772 AFDNP55196 1824 aaKnown RBP12.74□□□□□ -0.37
TPM3P2-201ENST00000397772 NFKBIEO00221 500 aa12.74□□□□□ -0.37
TPM3P2-201ENST00000397772 CYP19A1P11511 503 aaPredicted RBP12.74□□□□□ -0.37
TPM3P2-201ENST00000397772 C1orf141Q5JVX7 400 aa12.74□□□□□ -0.37
TPM3P2-201ENST00000397772 NRXN2Q9P2S2 1712 aa12.74□□□□□ -0.37
TPM3P2-201ENST00000397772 CARMIL3Q8ND23 1372 aa12.73□□□□□ -0.37
TPM3P2-201ENST00000397772 ZPR1O75312 459 aa12.73□□□□□ -0.37
TPM3P2-201ENST00000397772 SULT6B1Q6IMI4 303 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms